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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
--------
WOX13(1)
----------->
RAV1(1)
----->
YAB1
--------->
MYB46(3)
---------->
DOF2
<----------
DOF2
-----
YAB1
------>
ZmHOX2a(1)
------->
GAMYB
--------->
ZAT6
--------->
ZAT6
gatggatattagaactgttcctgctagataacaacaacagagctaatttcacatcaacactaaaaaagcttcttacagtagaactctttacatgttcaga
8677800
------>
MYB83
<---------
YAB1
--------->
GLK1(2)
<---------
At5g28300
--------->
YAB1
------>
MYB46(1)
<--------
ATHB1
--------->
MYB52(1)
---------->
DOF2
<---------
YAB1
------------>
AtMYB77
--------->
ANAC58
<---------
ATHB12
----------->
RAV1(1)
--------->
ANAC58
--------->
ICU4
--------->
MYB46(3)
--------->
REM1(1)
----------->
GT1
<------
caaaaacaatgattttttgatattcttgaaccaacagttacagtcatctatatgctatgctacatttcaagcatgtagaaagtagaaacccatagtataa
8677900
--------->
DAG2
--------->
ANAC46
--------->
ANAC58
--------->
TOE1(2)
--------->
ARR14(2)
<---------
At4g35610
--------->
MYB46(3)
--------->
WOX13(1)
<---------
ICU4
--------->
ICU4
--------->
ANAC58
<---------
ATHB12
--------->
GLK1(2)
--------->
ANAC46
--------->
At4g35610
--------->
ANAC58
--------->
ANAC58
<---------
GLK1(2)
<---------
LBD16
---------->
DOF2
<---------
YAB1
--------->
ANAC46
---
YAB1
------>
ZmHOX2a(1)
--------->
ANAC58
<---------
TOE2(3)
--------->
ANAC58
ttcagagattcctgattcaatatttgcgcaagcaaaaattgaagcagacaaacattttggttatgacaagaaccagcgagaaaacacacaaatcaatcta
8678000
<---------
ANAC58
<---------
ANAC58
--------->
TOE1(2)
--------->
YAB1
--------->
TOE2(2)
<---------
TOE2(3)
<---------
ANAC55(2)
---------->
DOF2
>>>>>>>>>
RAP2.2
--------->
ANAC55(2)
<---------
MYB52(2)
--------->
LBD16
<---------
TOE1(3)
--------->
MYB46(3)
<---------
ANAC58
<---------
TOE2(3)
----------->
RAV1(1)
--------->
TOE2(3)
--------->
MYB52(1)
<----------
ID1
--------->
WOX13(1)
<---------
DOF5.7(2)
<---------
ICU4
-------->
HAHB4
<---------
ANAC58
<---------
MYB52(2)
<---------
YAB1
--------->
ICU4
<---------
ANAC46
--------->
At4g35610
----------->
GT1
--------->
ICU4
<---------
YAB1
<---------
LBD16
<---------
At4g35610
agttagtgaatcactctctcgtcaatattgcaacaaaggtaatgatcaatctaaaacaacttgcgggaaaatcgaattagctaacgtaagaaggcgagca
8678100
<---------
ANAC58
<-------
TEIL
--------->
CCA1(2)
--------->
ARR14(1)
--------->
ARR14(2)
<---------
ARR14(2)
----------->
HVH21
--------->
WRKY38(1)
--------->
ARR11(1)
<------
NtERF2
<-------
TEIL
--------->
ARR14(2)
<---------
ANAC58
<---------
DEAR3(1)
--------->
ARR14(2)
<---------
KAN4(2)
--------->
CCA1(2)
<---------
LBD16
<-----------
GT1
---------->
DOF2
<---------
HSFB2a(2)
------>
ZmHOX2a(1)
gtttcacgattcgttgatcacagtaaagaataaacacgattcgagagagatacgattttgcttac
tagcttcaaattcctcggcgaatgacat
ttgggaa
8678200
<---------
ARR14(2)
--------->
ARR14(2)
----------------->
AG
----------------->
AGL1
--------------->
AGL15
<---------------
AGL15
<-----------------
AG
----------------->
AGL1
----------------->
AG
<-----------------
AGL3
----------------->
AGL3
<---------
AHL20(2)
<-----------------
AGL1
<---------
AHL20(2)
<-----------------
AGL2
<---------
AHL20(1)
----------------->
AGL2
--------->
AHL20(2)
<----------
DOF2
--------->
GLK1(1)
--------->
AHL20(1)
<---------
DAG2
--------->
ZAT18
<---------
GLK1(1)
*
TSS
---------->
DOF2
--------->
YAB1
<-----------
GT1
<---------
ZAT18
<---------
TOE2(3)
<-----------
RAV1(1)
--------->
ARR11(3)
<---------
YAB1
<---------
ANAC46
<---------
TOE1(3)
<---------
GLK1(1)
<---------
ARR11(3)
<----------
DOF2
<------------
CBF
tttagggtttcccaaaatggatatgtt
gcaaaatgaaagaaatatatttgcagtaatactctttatttttgcctttttcttattttgtattggcgcacaa
8678300
<---------
ANAC58
<---------
ANAC46
--
<---------
ANAC55(2)
----
<---------
ANAC58
<-----
<---------
ICU4
--------
<---------
GLK1(2)
<-------
--------->
YAB1
<---------
ARR14(2)
<------
<---------
ANAC46
--------->
YAB1
<---------
ARR11(3)
-------
<---------
YAB1
--------->
AHL20(2)
--------->
ARR11(3)
-------
<-----------
GT1
----------->
GT1
--------->
ANAC55(2)
--------->
ARR14(2)
<------
actaaacgatgactaattttcattttttgtgtaaattactagggaaaataataagaatttcgtattttgaatttttagtatcttgacaaaaacaaaataa
8678400
<---------
AHL20(2)
--------->
AHL20(2)
<---------
AHL20(1)
<---------
AHL20(2)
--------->
AHL20(2)
--------->
GT1
----->
ICU4
----
ICU4
--------->
AHL20(2)
->
AHL20(2)
--------->
TOE2(3)
<
--
AHL20(1)
--------->
TOE2(3)
--------->
TOE1(3)
--------->
REM1(1)
---
ATHB51
<---------
AHL20(2)
<---------
MYB59
<---------
At4g35610
-->
ICU4
<---------
ICU4
<---------
ARR11(3)
--------->
AtMYB61
--------->
At4g35610
-->
AHL20(2)
<----------
DOF2
-------->
ATHB1
--------->
AtMYB61
-
---
AHL20(2)
<-----------
GT1
--------->
ICU4
--------->
MYB46(3)
<-----
ttagtaatttaattttttctttatcaatttcttaaactgaaccatgaactaattcagaattattcaacctaaaccaccaaaatttagctacaactagttt
8678500
<---------
YAB1
<---------
AHL20(2)
<---------
AHL20(1)
--------------->
AtSPL8
<---------
YAB1
<---------------
AtSPL8
<---------
bZIP60(1)
--------->
ANAC58
--------->
bZIP60(1)
--------->
YAB1
--------->
ANAC58
<---------
TOE2(3)
<---------
TOE2(3)
---------->
DOF2
<-------
TEIL
----------->
TGA1
--------->
ARR14(2)
---------
AHL20(2)
--------->
AHL20(2)
----------->
HVH21
<---------
ARR14(2)
-------->
AHL20(2)
--------->
MYB46(3)
<---------
WOX13(1)
--------->
WOX13(1)
<---------
GLK1(2)
----
AHL20(2)
--------->
MYB59
<---------
AHL20(2)
<---------
ARR14(2)
--------->
ICU4
attttaatgaaaacattttggtaaccactaaattaaagacgctaattggtacatatatgagtattctatcaatctctgacgttattatttttggattctc
8678600
---------->
DOF2
--------->
At4g35610
<---------
GLK1(1)
--------->
GLK1(1)
----------->
GT1
--------->
ARR11(3)
--------->
YAB1
----
<---------
ARR11(3)
--------->
YAB1
----
--------->
ANAC58
--------->
ANAC46
-------
<---------
AtLEC2
--------->
ANAC58
--------->
MYB46(3)
--------->
GLK1(1)
----
acatattttgtatgaagaaaacagaattacacaagatatcacagctataaagaacacatttcaacaactacacaaaatcagaaatcgtaacaacttcaca
8678700
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AGI:
At3g24010.1
Description:
PHD finger family protein. similar to PHD finger protein-related [Arabidopsis thaliana] (TAIR:AT1G54390.3); similar to PHD finger protein-related [Arabidopsis thaliana] (TAIR:AT1G54390.4); similar to PHD finger protein-related [Arabidopsis thaliana] (TAIR:AT1G54390.5); similar to predicted protein [Physcomitrella patens subsp. patens] (GB:EDQ54844.1); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain Zinc finger, PHD-type; (InterPro:IPR001965); contains InterPro domain Zinc finger, FYVE/PHD-type; (InterPro:IPR011011)
Range:
from: 8675963
to: 8678227
Orientation: Reverse
Links:
TAIR
MIPS
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publications
when using AthaMap.
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