Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100   --------WOX13(1)               ----------->RAV1(1) ----->YAB1                    --------->MYB46(3)            ---------->DOF2       <----------DOF2 -----YAB1        ------>ZmHOX2a(1)------->GAMYB      --------->ZAT6    --------->ZAT6   gatggatattagaactgttcctgctagataacaacaacagagctaatttcacatcaacactaaaaaagcttcttacagtagaactctttacatgttcaga  8677800                              ------>MYB83                   <---------YAB1                   --------->GLK1(2)<---------At5g28300       --------->YAB1         ------>MYB46(1)       <--------ATHB1        --------->MYB52(1)                            ---------->DOF2      <---------YAB1         ------------>AtMYB77                 --------->ANAC58      <---------ATHB12       ----------->RAV1(1)                  --------->ANAC58      --------->ICU4       --------->MYB46(3)              --------->REM1(1) ----------->GT1  <------   caaaaacaatgattttttgatattcttgaaccaacagttacagtcatctatatgctatgctacatttcaagcatgtagaaagtagaaacccatagtataa  8677900                                 --------->DAG2                           --------->ANAC46                           --------->ANAC58                           --------->TOE1(2)                  --------->ARR14(2)    <---------At4g35610          --------->MYB46(3)    --------->WOX13(1)                  <---------ICU4--------->ICU4                   --------->ANAC58        <---------ATHB12     --------->GLK1(2) --------->ANAC46 --------->At4g35610      --------->ANAC58  --------->ANAC58    <---------GLK1(2) <---------LBD16---------->DOF2        <---------YAB1         --------->ANAC46 ---YAB1 ------>ZmHOX2a(1) --------->ANAC58           <---------TOE2(3)            --------->ANAC58   ttcagagattcctgattcaatatttgcgcaagcaaaaattgaagcagacaaacattttggttatgacaagaaccagcgagaaaacacacaaatcaatcta  8678000                                                                                           <---------ANAC58                                                                                           <---------ANAC58                                                                                  --------->TOE1(2)                                        --------->YAB1                            --------->TOE2(2)                                 <---------TOE2(3)                               <---------ANAC55(2)                               ---------->DOF2 >>>>>>>>>RAP2.2                   --------->ANAC55(2)                              <---------MYB52(2)             --------->LBD16    <---------TOE1(3)                              --------->MYB46(3)            <---------ANAC58    <---------TOE2(3)                            ----------->RAV1(1)--------->TOE2(3)               --------->MYB52(1)                           <----------ID1   --------->WOX13(1)                 <---------DOF5.7(2)                      <---------ICU4    -------->HAHB4      <---------ANAC58 <---------MYB52(2)                     <---------YAB1    --------->ICU4       <---------ANAC46--------->At4g35610 ----------->GT1     --------->ICU4    <---------YAB1      <---------LBD16  <---------At4g35610   agttagtgaatcactctctcgtcaatattgcaacaaaggtaatgatcaatctaaaacaacttgcgggaaaatcgaattagctaacgtaagaaggcgagca  8678100                                                         <---------ANAC58                                                <-------TEIL                                               --------->CCA1(2)                                               --------->ARR14(1)                                              --------->ARR14(2)                                              <---------ARR14(2)                    ----------->HVH21           --------->WRKY38(1)                --------->ARR11(1)               <------NtERF2       <-------TEIL                --------->ARR14(2)    <---------ANAC58    <---------DEAR3(1)     --------->ARR14(2)   <---------KAN4(2)  --------->CCA1(2)              <---------LBD16 <-----------GT1     ---------->DOF2   <---------HSFB2a(2)                  ------>ZmHOX2a(1)   gtttcacgattcgttgatcacagtaaagaataaacacgattcgagagagatacgattttgcttactagcttcaaattcctcggcgaatgacatttgggaa  8678200                 <---------ARR14(2)                 --------->ARR14(2)        ----------------->AG        ----------------->AGL1        --------------->AGL15        <---------------AGL15       <-----------------AG       ----------------->AGL1       ----------------->AG       <-----------------AGL3       ----------------->AGL3            <---------AHL20(2)       <-----------------AGL1           <---------AHL20(2)       <-----------------AGL2           <---------AHL20(1)       ----------------->AGL2           --------->AHL20(2)            <----------DOF2    --------->GLK1(1)                   --------->AHL20(1)           <---------DAG2        --------->ZAT18    <---------GLK1(1)      *TSS ---------->DOF2    --------->YAB1 <-----------GT1          <---------ZAT18 <---------TOE2(3)  <-----------RAV1(1) --------->ARR11(3)    <---------YAB1              <---------ANAC46 <---------TOE1(3)<---------GLK1(1)     <---------ARR11(3)<----------DOF2            <------------CBF   tttagggtttcccaaaatggatatgttgcaaaatgaaagaaatatatttgcagtaatactctttatttttgcctttttcttattttgtattggcgcacaa  8678300                                                         <---------ANAC58                                                         <---------ANAC46                          --                                                         <---------ANAC55(2)                     ----                                                         <---------ANAC58                      <-----                                                    <---------ICU4                           --------                                                    <---------GLK1(2)                        <-------                                                 --------->YAB1             <---------ARR14(2)<------                        <---------ANAC46      --------->YAB1                <---------ARR11(3)-------                <---------YAB1              --------->AHL20(2)              --------->ARR11(3)-------               <-----------GT1         ----------->GT1   --------->ANAC55(2)--------->ARR14(2)<------   actaaacgatgactaattttcattttttgtgtaaattactagggaaaataataagaatttcgtattttgaatttttagtatcttgacaaaaacaaaataa  8678400      <---------AHL20(2)      --------->AHL20(2)     <---------AHL20(1)     <---------AHL20(2)     --------->AHL20(2) --------->GT1 ----->ICU4 ----ICU4 --------->AHL20(2) ->AHL20(2)                                                      --------->TOE2(3)                  < --AHL20(1)                --------->TOE2(3)                     --------->TOE1(3)     --------->REM1(1) ---ATHB51<---------AHL20(2)                                     <---------MYB59   <---------At4g35610 -->ICU4  <---------ICU4 <---------ARR11(3)                      --------->AtMYB61 --------->At4g35610 -->AHL20(2)    <----------DOF2                          -------->ATHB1   --------->AtMYB61         - ---AHL20(2) <-----------GT1                            --------->ICU4--------->MYB46(3)       <-----   ttagtaatttaattttttctttatcaatttcttaaactgaaccatgaactaattcagaattattcaacctaaaccaccaaaatttagctacaactagttt  8678500                                                                                    <---------YAB1                                                                                   <---------AHL20(2)                                                                                   <---------AHL20(1)                                           --------------->AtSPL8                <---------YAB1                                           <---------------AtSPL8           <---------bZIP60(1)                                    --------->ANAC58                        --------->bZIP60(1)     --------->YAB1                 --------->ANAC58                       <---------TOE2(3)   <---------TOE2(3)           ---------->DOF2 <-------TEIL              ----------->TGA1  --------->ARR14(2) ---------AHL20(2)            --------->AHL20(2)                         ----------->HVH21 <---------ARR14(2) -------->AHL20(2)   --------->MYB46(3)   <---------WOX13(1)       --------->WOX13(1)      <---------GLK1(2) ----AHL20(2)  --------->MYB59<---------AHL20(2)           <---------ARR14(2)    --------->ICU4   attttaatgaaaacattttggtaaccactaaattaaagacgctaattggtacatatatgagtattctatcaatctctgacgttattatttttggattctc  8678600                                             ---------->DOF2                                        --------->At4g35610                                 <---------GLK1(1)                                 --------->GLK1(1)                                ----------->GT1                                --------->ARR11(3)                                --------->YAB1 ----                                <---------ARR11(3)                         --------->YAB1        ----                              --------->ANAC58                       --------->ANAC46         -------       <---------AtLEC2       --------->ANAC58               --------->MYB46(3)--------->GLK1(1) ----   acatattttgtatgaagaaaacagaattacacaagatatcacagctataaagaacacatttcaacaactacacaaaatcagaaatcgtaacaacttcaca  8678700  Previous    Next  AGI:  At3g24010.1    Description:  PHD finger family protein. similar to PHD finger protein-related [Arabidopsis thaliana] (TAIR:AT1G54390.3); similar to PHD finger protein-related [Arabidopsis thaliana] (TAIR:AT1G54390.4); similar to PHD finger protein-related [Arabidopsis thaliana] (TAIR:AT1G54390.5); similar to predicted protein [Physcomitrella patens subsp. patens] (GB:EDQ54844.1); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain Zinc finger, PHD-type; (InterPro:IPR001965); contains InterPro domain Zinc finger, FYVE/PHD-type; (InterPro:IPR011011) Range:  from: 8675963    to: 8678227    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.