Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                    <----------DOF2                                               ---------->DOF2                   ------>ZmHOX2a(2)      <---------ANAC58                     <---------------AGL15               --------->ARR11(3)      <---------ANAC46                     --------------->AGL15        <---------At4g35610      <---------ANAC58                    ----------------->AGL1        <-------GAMYB<---------ANAC58  <---------WOX13(1)                  <---------DAG2                    --------->At4g35610 -------->ATHB12        <---------ATHB12  <-----------------AGL1     --------->ZAT14 <---------ANAC58 ---->ATHB12     --------->ANAC58     <----------DOF2                <---------ZAT14 <---------ANAC46 ->ANAC58        --------->ANAC58  <-----------GT1          <---------WRKY38(1)<---------ARR11(3) ->ANAC58  ---------->DOF2       --------->AHL20(2)         <---------WRKY12 --------->ETT(2)   attgattggcttgtaaagcactccaaatcatcgaattaaactttaccccaaaaggagagaagtcaactctctgcagttgtcgatctttcttgtgtttttg  26969200                   <---------MYB46(3)                  <---------YAB1            --------->ICU4            <---------YAB1          --------->YAB1         <---------YAB1                                             <---------ARR11(3)         --------->ICU4                                             --------->ARR14(2)       --------->YAB1                          <----------DOF2      <---------ARR14(2)      --------->ICU4                    <---------DAG2 ----------->GT1                        <------      <---------YAB1                    <----------DOF2------>ZmHOX2a(1)                  <---------GLK1(2)   gtcatttgatgatgatgatggtgattgtggaagaagacacagcttttttcttttatcctgtgaaaaacaagatttgtctatgttctctgtctgattcttt  26969300                 <-----------RAV1(1)                                                             <---                <---------ARR14(2)                                                             <-----             <---------ANAC58                     <------MYB83                  --------->ARR11(3)             <---------ANAC58                     <------MYB46(1)               <---------ARR11(3) --             <---------ANAC46                   <---------WOX13(1)        --------->YAB1   <---------LBD16    <----------DOF2       --------->ZAT14     --------->ATHB12           --------->ICU4   <---------LBD16 ----DOF2<---------At4g35610                 <---------YAB1       ---------->DOF2<------ZmHOX2a(2) <-   atctgtctttcttctgcgtatgtggctgtgttctctgtatattagatttgattggtgttccctcttcttaaagccatgatgagatcacttccttcggggt  26969400                                                                                               <-----                                                                                               ------                                                              --------->YAB1                   <-----                                                              --------->ANAC55(2)             <------                         <---------AtLEC2                 <----------DOF2                     ------- <----------DOF2         <---------ANAC58              <---------ANAC46                     --------- <---------DAG2          <---------ANAC58              <---------ANAC58                  --------->MYB52(1) ------WRKY12            <---------ANAC46         <-----------RAV1(1)               ----------------- ------HVH21<-----------GT1              ----------->RAV1(1) ---------->ID1         ----------------- ------->At4g35610  --------->ATHB12    <----------ID1 <---------ANAC58            ------>NtERF2 --------At4g35610 <-------TEIL   ---------->DOF2--------->ARR11(3)--------->ICU4 <----------ID1   cagctttttcaattttacgagttcattgcatgttttgaaagaacaacaaaatatgttgcgtttttcgtaattttgaaaaacttgaggccaaaaacggata  26969500                                                                                                 <---           ----------->RAV1(1)                                                                <------          <----------ID1                                                                      -------        ------------------------>ANAC81                                                 <---------MYB46(3)        --------->ANAC58                                                               <---------DEAR3(1)        --------->ANAC58                                                               <---------AtMYB61 ----RVE1(1)                      ---------->ID1                                       --------->ALFIN1 --->GLK1(1)                 <---------GLK1(2)                        <<<<<<<<<<<<<<<<<LFY    <------ ----CCA1(1)                 --------->ARR11(3)                       ----------->RAV1(1)   --------- ---ARR14(2)       --------->AHL20(2)<----------DOF2               --------->ANAC46 <---------DEAR3(1) -->ARR14(2)   ----------->GT1   <-----------GT1               ------>ZmHOX2a(1)--------->HSFB2a(1) -->GT1 --------->ANAC46     <---------ARR11(3)             ------>ZmHOX2a(1)   --------->HSFC1(2) >AGL2 --------->DAG2    ---------->DOF2                <---------ARR14(2)      <---------HSFC1(2)<-- >AGL1---------->DOF2   --------->AHL20(2)         *TSS --------->ARR14(2)      <---------HSFB2a(1)   ttttcgaaaaaagcaacaagataaaataaaagatttttccttttactctcacttgcactatcctcctcttcgcaacaatggatgcttcggtggtgagatt  26969600          <------NtERF2         --------->LBD16         --------->ANAC58         --------->ANAC58                                                                     -------        --------->DEAR3(1)                                                                    -------        --------->ATERF1(2)           --------->ARR11(1)                                      <------        <---------ATERF1(2)           --------->ARR14(2)                                 --------->LBD16       <---------LBD16                --------->ARR11(3)                               ------->GAMYB     ------->GAMYB              <-----------GT1                                       <---------MYB55(2)    --------->MYB46(3)    <---------GLK1(2)                                --------->ALFIN1   <------ --------GT1            --------->LBD16              --------->MYB52(1)<---------ZAT14--------->MYB46(3) ---GLK1(2)           <------NtERF2--------------->AGL15       <---------At4g35610   -------->P -->ARR11(3)         ------>NtERF2 <---------------AGL15       --------->At4g35610   ------>MYB46(1) ---ARR11(3)         --------->MYB52(1)--------->CCA1(2)    --------->ATERF1(1)      ------>MYB83 --- -->ARR10------>NtERF2<---------LBD16 <---------ARR11(3)    <---------At4g35610   ------>ZmHOX2a(2) ---------GT1       <---------ALFIN1  <---------ARR14(2)   <---------ATERF1(1)    ===================   ttcccaatcgccggcaagagtgccaccggaatttgaaccagatatggagaagattaaacggaggctgctcaagtacggtgttgatccaacccccaaaatc  26969700                                                                                    --------->RAP2.3(1)                                                                              <---------LBD16                                                                            <---------ZAT14                                                                            <---------ARR14(2)                                                                      <---------DEAR3(1)           ---------->DOF2                                            <---------AtMYB61<------NtERF2          --------->LBD16                                            <------NtERF2  --------->ATERF1(1)         --------->ANAC46                                          <---------ANAC46 <------NtERF2 -->ARR11(3)                                      --------->ANAC58 <---------DEAR3(1)<---------ANAC46 -->ARR14(2)                                  ------>MYB83    <---------TOE2(1)   <---------DEAR3(1) ---ARR11(3)                        ------->GAMYB --------->ANAC58 --------->ALFIN1<---------ATERF1(1) ---ARR14(2)                        --------->TOE2(3)--------->ARR14(2)     --------->ARR14(2) --->ZmHOX2a(1)---------->DOF2   --------->MYB52(1)  <---------ARR14(2)  <---------ANAC46     ------- ====HOX2a_HOX2a              --------->ANAC46------>MYB46(1) <---------TOE1(1)--------->ANAC46 <----   ctgaacaatctccgaaagaaagaaattcaaaaacacaaccgtagaaccaagcgcgaaaccgagtccgaggcggaggtgtatacggaggcgcagaaacaat  26969800                                                                               <---------DEAR3(1)                                                                              --------->ATERF1(1)                                                                             <---------RAP2.3(1)                                                                             <---------ERF1                                                                             <---------DEAR4(2)                                                                             <---------ATERF1(1)                                                                             ------>NtERF2                                                                             <---------ORA47(2)                                                                            <---------RAP2.3(3)                                                                            <---------ATERF1(2)                                                                            --------->ALFIN1                                                                            <---------ANAC46                                                                            <---------RAP2.3(2)                                                                            --------->ATERF1(2)                                                                            <---------RAP2.6(2)                                                                            <---------DEAR3(1)                                                                           --------->ATERF1(1)                                                                           <---------ABI4(1)                                                                          --------->ALFIN1        <--                                                                       --------->DAG2           <----                                                                      --------->DAG2           <-----                                                                     ---------->DOF2          -------                                                                 --------->LBD16              <------                                                                --------->HSFC1(1)            -------                                                                <---------HSFB2a(2)   <------MYB83<--     <------ZmHOX2a(1)                    --------->ANAC46      <---------HSFC1(1)    <---------MYB46(3) -->WOX13(1)                              --------->ANAC58      --------->HSFB2a(2)   <------MYB46(1) -----ATHB12                              --------->ANAC58     <---------LBD16<------NtERF2  <-------   caatggaggaagaagctcgttttcaaacccttagacgggaatacaagcaattcacgaggtcaatttctggaaaaaggggcggcgatgttggtttgatggt  26969900  <---------ARR14(2)  --------->GLK1(2)  --------->ARR14(2) <---------GLK1(1) --------->GLK1(1) ----MYB83 ----P                                              <---------SPL7 --GAMYB                                           <---------ANAC58 -->MYB55(2)                                  --------->MYB52(2) ---MYB46(3)                                <---------MYB52(1)                                      - -->ATHB12  --------->ANAC58         <------ZmHOX2a(1)--------->SPL7                           ------ ----MYB46(1)                 --------->At4g35610  <---------ANAC46         ----------->GT1   <------ --YAB1     --------->ANAC58  <---------At4g35610  <---------ANAC58 <--------P          ---------->DOF2   tgggaatccatgggaaggaatcgagagagtgaagctgaaggagctcgttagtggcgttcggagagaagaggttagtgctggtgaattgaagaaagagaat  26970000                                           <---------HSFB2a(2)                                           >>>>>>>ZML2                                           <---------HSFC1(1)                                           --------->HSFB2a(2)                                      <---------ANAC58                                      <------MYB46(1)                             <------ZmHOX2a(2)                             <---------GLK1(1)                             <---------HSFB2a(1)                            --------->ARR14(2)                            <---------ARR14(2)                            --------->ARR11(3)                            <---------ARR11(3)                            <-----------ARR10                            --------->ARR14(3)                            <---------ARR14(3)                           <------ZmHOX2a(1)                          --------->HSFC1(2)                                                        -                          <---------HSFC1(2)                                                   ------               <---------ARR11(3)     <------MYB83 ------>NtERF2                              -------               <---------ARR14(2)     <---------ANAC58                                        ------- --------->DOF2--------->ARR11(3)    <---------MYB46(3)      --------->ALFIN1                ------>ZmHOX2a(2) --->GLK1(2)   --------->ARR14(2)  <---------MYB52(1)      <---------ANAC46                  ======== ---GLK1(2)  ----------->ARR10------>ZmHOX2a(2)   --------->DEAR3(1)--------->GLK1(2) --------->GLK1(2)   ctaaaagagttgaagaagatacttgagaaggatcttcgttgggttctagacgacgacgttgatgtggaagaatttgatttggacaaagaatttgatcctg  26970100  Previous    Next  AGI:  At5g67560.1    Description:  ATARLA1D (ADP-ribosylation factor-like A1D); GTP binding. similar to ATARLA1C (ADP-ribosylation factor-like A1C), GTP binding [Arabidopsis thaliana] (TAIR:AT3G49870.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN83936.1); contains InterPro domain Ras GTPase; (InterPro:IPR001806); contains InterPro domain Small GTP-binding protein; (InterPro:IPR005225); contains InterPro domain ARF/SAR superfamily; (InterPro:IPR006689) Range:  from: 26967535    to: 26969437    Orientation: Forward Links:  TAIR  MIPS    AGI:  At5g67570.1    Description:  EMB1408 (EMBRYO DEFECTIVE 1408). similar to EMB2279 (EMBRYO DEFECTIVE 2279) [Arabidopsis thaliana] (TAIR:AT1G30610.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO44704.1); contains InterPro domain Pentatricopeptide repeat (InterPro:IPR002885) Range:  from: 26969551    to: 26972073    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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