Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                     ----------->GT1           ---------->DOF2                                               <---------AHL20(2)         <-------TEIL                  <-------TEIL       --------->GLK1(2)                   --------->CCA1(2)     <-----------GT1                <---------GLK1(2)                   <---------ARR11(3)        --- --------->AHL20(2)                 --------->ARR14(2)         ---------->DOF2                    --- <---------AHL20(2)                 <---------ARR14(2)      --------->AHL20(2)                  ----- >DOF2 --------------->AtSPL8 --------->ATHB12--------->AHL20(2)--------->DAG2           --------->YAB1   tatataatttctgttccacatacacagactcatcagtggattctgggtttaaattgtaacaaataaaaagtcaagatacaaaaggaagtgagcataacta  25029100                            <---------AHL20(2)                        --------->AHL20(2)                       <---------AHL20(2)                   --------->ICU4             <---------TOE2(3)   ---------->DOF2                                                   <-         --------->YAB1--------->AHL20(2)                                                          <- ------>ANAC58    <---------ARR11(3)                                                              --- ------>ANAC58----------->GT1--------->AHL20(2)        --------->TOE2(3)                      <------ ----->DOF2  --------->DAG2 --------->AHL20(2)----------->GT1                                --------   aagcaaaacaactataaggtgatatttaaaataaataaagaaatataggggttaaaacataaatacaaactcttcgctaattctcaaaacccttcccttt  25029200                                                              <---------YAB1                                                  --------->ANAC58                           <------MYB83           --------->ANAC58        <---------HSFB2a(1)                           <------MYB46(1)      <---------ALFIN1          <---------At4g35610             <---------ARR14(2)     <---------ANAC58    --------->AHL20(2)<---------ZAT2<---------At4g35610 --------DAG2--------->ARR14(2)     <---------ANAC58   <---------MYB52(1) --------->ZAT2--------->At4g35610 ---------DOF2            <---------AtMYB61    <---------REM1(2)          --------->HSFB2a(1)<------- ------>TOE2(3)<------------AtMYB77 --------->YAB1--------->ANAC46        --------->HSFC1(2) <------- ----DOF2 --------->YAB1 <---------MYB52(1)   <-----------HVH21           <---------HSFC1(2) <------- ------------->WRI1     <-------GAMYB----------------------->TaNAC69(2)   --------->At4g35610--------   cctttatcgcagtcgtaactggcctccgttggtctctatcgtgactcccttcacgccattaattccgattaatcggagcttcgacttctcatcttccttg  25029300                                                                                     ------>ZmHOX2a(2)                                                                                    <------ZmHOX2a(2)                                                                                   --------->ARR11(3)                                                                                   --------->ARR14(3)                                                                                   <---------ARR14(3)                                                                                   <---------ARR11(3)                                                                                   <---------ARR14(2)               <---------ARR11(3)                                                  --------->AGP1              <---------CCA1(2)                                                    --------->ARR14(2)       <----------DOF2                                                       <-----------GT1 --ANAC58   <---------DAG2  --------->YAB1                                ----------->GT1  <--------- --ANAC46   --------->TOE2(3)           <----------DOF2                 <--------P <---------AGP1 --ANAC58   --------->TOE1(3)           <---------DAG2            <------------CBF <-----------ARR10 ------------->WRI1   --------->ANAC55(2)                        --------->ATHB12 <---------CCA1(2)   ggtaactcgctctaccttatcttcatgtaatcaaaattcgaactttttgtctgtgtgttttagttgtttattgggtaagttactagatcttctctttcga  25029400                                                                    ========================HOX2a_HOX2a                                                                    <------ZmHOX2a(2)                                                                   --------->ARR11(3)               -               <---------TOE1(2)                                   <---------ARR11(3)              --             --------->TOE1(2)                            --------->TOE2(3)                   -------            <---------ANAC58                           <-----------GT1    <-----------GT1     -------            <---------ANAC58                       <<<<<<<<<EIN3  <------ZmHOX2a(1)         <--------           <-------TEIL                --------->GLK1(2)  --------->TOE1(3)           <---------TOE1(2) -DOF2 <---------At4g35610   --------->ATHB12 ------------>CBF  <---------TOE1(2)    ------>ZmHOX2a(1)   ttttgtttcagcgttcgtgcgattcaacgtttgatttgaagaatcagtagcaatgtataaccttagtaggatcatttatcgtttctcctcggtttcactt  25029500                                                                                               ------                                                                                              ------>ZmHOX2a(2)                                                                                             <------ZmHOX2a(2)                                                                                            <--------                                                                                            <--------               --------->At4g35610                                                          ---------       --------->ANAC58                             <-----------GT1                         --------- -------->TOE1(3)                               <---------ARR11(3)                          <-------- ------->ZAT6  ----------->RAV1(2)              --------->ARR11(3)                          --------- -->ANAC46    <---------ARR14(2)                --------->GLK1(2)                           <-------- -->ANAC55(2) --------->GLK1(2)         --------->REM1(1)   --------->At4g35610            <------ZmHOX2a(1) ---GT1--------->ANAC58        xxxxxxxxxxxxxxxxxxx>smallRNA(fl3)   ------->TEIL         --------->YAB1   aaccctagcacgagagcatctgggtttctacttgagaacgcttcatcaaaaatcttacaatctgctacgaatcgagcattttctgcaaaatcaggatctg  25029600                                                                 --------->At4g35610                                                               ------>ZmHOX2a(2)                                                              --------->GLK1(1)                                                              <------ZmHOX2a(2)                                                             <---------AGP1 <---------WOX13(1)                                                             <---------ARR11(3)                                                             <---------ARR14(3)                                                             --------->ARR14(3)                                                             --------->ARR14(2)                                                      <---------SPL7     <---------YAB1                                                     <---------MYB46(3)------>ZmHOX2a(2)                                                    <---------------AtSPL8--------->ATHB12                                                  <------MYB83<---------GLK1(1)                                                  <------MYB46(1)<---------At4g35610                                                 <---------MYB46(3)  <---------ARR14(2)                                                 --------->MYB55(2)  <---------ARR11(3)                                                 <---------AtMYB61   --------->ARR11(3)                                             --------->ATHB12--------->ARR11(3)                                            <------ZmHOX2a(2)--------->GLK1(2)                                            =======================HOX2a_HOX2a                                           --------->ARR11(3)<---------ARR14(2)    --------->ALFIN1                       <---------ARR11(3)<-----------ARR10 ----->HVH21                              ====================================HOX2a_HOX2a -ARR14(2)                                ===========================HOX2a_HOX2a -ARR11(3)                                ============================HOX2a_HOX2a >ARR11(3)        --------->RAP2.6(3)     <------ZmHOX2a(1) <------ZmHOX2a(1) >ARR14(2)       --------->MYB52(1)    ===============================HOX2a_HOX2a ---ARR10     --------->YAB1           <------ZmHOX2a(1)    <---------GLK1(2) >GLK1(2)    <---------YAB1            ==============================HOX2a_HOX2a -AGP1   <------NtERF2              <-----------RAV1(2)     ==================HOX2a_HOX2a    <-------   atggagttggaggcgatgataacggctggaatatttcaacaggaggatcatttggtggtacaggatctgctgatcttgattgggacaataaatctatgtg  25029700                                                                  ------>ZmHOX2a(1)                                                              --------->ARR14(2)                                                              <---------ARR11(1)                                                              --------->GLK1(2)                                                <---------At4g35610                                                --------->At4g35610                                            <-----------HVH21 <---------ARR14(2)                                           --------->ETT(2)  <---------ARR14(1)                                        <---------MYB46(3)--------->At5g28300                                        <------MYB83      ------>NtERF2                            <-                                        <------MYB46(1)   <------NtERF2  --------->YAB1            --                                       <---------AtMYB61 --------->LBD16<---------YAB1 <---------YAB1                                      <---------MYB52(1)<---------DEAR3(1)     ------->GAMYB       <- ----RAV1(1)    <------ZmHOX2a(1)    <-------GAMYB     <---------LBD16<---------At4g35610   <--------   gtctactggtttaactaaggagcatttcgatggtgtctccgttggtcgtcagaagaacgcggcgaatccttcttctgataacaccccttctgattcgggt  25029800                                                                     ---------->DOF2               <---------ANAC58                                   <---------ANAC58               <---------ANAC58                                   <---------ANAC58    --------->ICU4                                          --------->ATHB12                   ------ --------bZIP60(1)          <--------P                     <---------YAB1                      ------ ------->bZIP60(1)  ---------->DOF2<---------MYB46(3)      --------->ICU4             <---------YAB1< --------TGA2(1)  ----------------->AGL1<---------TOE2(3)--------->YAB1              <---------ARR11(3) -ANAC46      --------->MYB59   <----------DOF2         <---------YAB1               --------->ARR11(3)   gatgtaatgagcaaattgggtccaaaggaggtagctttggttaatgaaatgaatgagtatgatgatttgcttaaagagattgagcaagataataggcaag  25029900                                                   <---------REM1(1)                                              <-------GAMYB                                             <-----------RAV1(1)                                       <------ZmHOX2a(2)                          <---------ARR11(3)                                       <---------ZAT14--------->ANAC58  <-------PIF5                                      <---------ARR11(3)                ------->PIF5     --------->YAB1    <----------DOF2                   --------->ARR11(3)               <---------ZAT2 <---------CCA1(2) --->ANAC58                          <---------GLK1(1)--------->ANAC58 <---------At4g35610     <----- --->ANAC58--------->ATHB12    --------->ATHB12 <---------MYB46(3)   <-----------RAV1(2) --------->TOE2(3) ------NtERF2                 --------->ICU4 --------->ALFIN1 ---------->DOF2     <-----------ARR10   gcagggcttttgttgatgggattaaacagagaatgatggagatcagtgtgttgttgaagcaagttaaagagccaggtgctagagggtcttatcttaagga  25030000  Previous    Next  AGI:  At5g62270.1    Description:  similar to mucin-related [Arabidopsis thaliana] (TAIR:AT2G02880.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO46237.1) Range:  from: 25029453    to: 25031443    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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