Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                       --------->AHL20(2)                                                                                     <---------AHL20(2)                                                                                  --------->AHL20(2)                                          <---------WOX13(1)                     --------->AHL20(2) -                                        <------ZmHOX2a(1)                      ----------------------               --------->AHL20(2)      <---------YAB1     --------->CCA1(2)  --------->AHL20(2)     <             ----------->GT1     <---------TOE2(3)    --------->AHL20(2)   ----------->GT1         <-       ---------->DOF2           <---------YAB1  ----------->GT1         ---------->DOF2          ---     --------->CCA1(2)           <---------TOE1(3)--------->YAB1        <------ZmHOX2a(1) <---------AHL20(2)  ----------->GT1     --------------->AGL15  --------->ARR11(3)       <---------TOE2(3)   --------->AHL20(2)   gatgaagataaaagtaagtaaattccagttatattaagattaggattgatattgataaaaatatgggtaacttaggaaagaaaataaaaaaataaaatcg  24789200                                      --------->ARR11(3)                                      --------->ARR14(2)                             --------->LBD16                         --------->ARR11(3)                                                    ------                         --------->ARR14(2)                                                    ------            <---------ARR11(3)        <---------ARR14(2)                                --------->ARR14(2)            --------->ARR11(3)   <------ZmHOX2a(2)                                      --------->GLK1(2)        <---------AHL20(2) <---------LBD16                                              ------->TEIL       --------->AHL20(2)<---------ARR14(2)                                          --------->ANAC46 <-----------GT1        --------->CCA1(1)                                            --------->ANAC58 -------->ARR14(2)      <---------GLK1(1)                                            --------->ANAC58 -->ANAC81 --------->RVE1(1)<---------LBD16                            --------->MYB46(3)   <-------- ---------ARR14(2)      --------->RVE1(1)              <---------LBD16--------->RAP2.6(3)   ------>ZmHOX2a(1) ---------TaMYB80   ------>ZmHOX2a(1) <---------ARR11(3)             --------->MYB52(1) <---------ARR14(2) ------->TaMYB80    ====================HOX2a_HOX2a   ----------->RAV1(2)           --------->LBD16   aatatacgatttaatatctctcctaaatatccgggatcaatatccagtacatgtttacctggaaaacaatctaacggctgattttccacgaatcctatct  24789300                                       <---------ZAT2                                       --------->ZAT2                           ------>ZmHOX2a(1)                 <---------bZIP60(2)                          --------->TOE2(2)             <---------ICU4                          --------->TOE1(2)             --------->YAB1                       <---------ARR11(3)              <---------YAB1                     <---------YAB1    <---------At4g35610   <---------ANAC46                       <                   --------->YAB1      --------->At4g35610   <---------ANAC58                      <-           <------------AtMYB77       <-----------RAV1(1)    <---------ANAC58                    <---           --------->MYB46(3)     <---------GLK1(2) ------>ZmHOX2a(1)                            <---      --------->TOE2(3)--------->ARR11(3)          --------->TOE2(3)                       <---------YAB1 --->YAB1 <---------At5g28300 <---------At4g35610---------->ID1  <---------ANAC46         <---------ARR11(3) --->TOE2(3)------->GAMYB==================================HOX2a_HOX2a                    --------->ARR11(3) -CCA1(2)<-----------GT1 ------>ZmHOX2a(2)      <-----------GT1  ----------->GT1  --------->AHL20(2)-   taagaaaatgttaaccgtcgattatgatcctacgctgattctgctggatttttccttataatgacttgggtaaaaacttccaaataaaacaagataatta  24789400                                                                                                   --                                                                                                 ----                                                                                                 ----                                                                                         ----------->TBP                                                                                         --------->AHL20(2)                                                                                         <---------AHL20(2)                                                                                       --------->AHL20(2)                                                                                       <---------AHL20(2)                                                                                 <---------CCA1(2) --                                                                          <---------ARR14(2)   ------                                                                          --------->ARR14(2)   ------                                                                         <---------GLK1(1)     <-----                                                                         <---------CCA1(2)   --------                                                                         <----------TaMYB80  --------                                                                         --------->GLK1(1) ----------                            <---------AHL20(2)                          ---------->TaMYB80 <---------AHL20(2)          <-----------------AG                                       --------->ANAC58  ----------->TBP          <-----------------AGL1----------->GT1                      --------->ANAC58<---------AHL20(2)      <----------DOF2       --------->AHL20(2)                       --------->ANAC46--------->AHL20(2)      <---------DAG2     --------->AHL20(2)                       ----------->HVH21  ----------->TBP ---------ARR14(2)      --------->AHL20(2)                      --------->At4g35610----------->TBP <- -----ZmHOX2a(1)   <------ZmHOX2a(1)                            --------->ZAT2   <-----------TBP <--- ------TOE1(3)   <---------TOE2(3)                          --------->MYB52(1)--------->LBD16<------- ------TOE2(3)   <---------TOE1(3)                          <-----------GT1 <---------LBD16--------->AHL20(2) -------->ARR14(2)----------->GT1              <------ZmHOX2a(1)<---------At4g35610--------->AHL20(2)   aggaaacgctttatctcttaaggaaaataaaaaaatgtaaaaacaccaaggacattcacaaataacagctcacgcatatccgcatatatatatatatata  24789500     <---------AHL20(2)     ----------->TBP     --------->AHL20(2)   --------->AHL20(2)   ----------->TBP   <---------AHL20(2) ----------->TBP <---------AHL20(2) --------->AHL20(2) ------->AHL20(2) ------->TBP                                                     <---------YAB1 ----->AHL20(2)                                        ------>ZmHOX2a(2) --------->TBP                                        <------ZmHOX2a(2) ----->TBP                                           <---------ARR14(2)                        <----- --->AHL20(2)                                        --------->ARR11(3)                        <----- ----AHL20(2)                                        --------->ARR14(3)                        <----- --->TBP                                             --------->AGP1   <---------ANAC58        <------NtERF2 ->AHL20(2) <---------ICU4               ------------>CBF  <---------YAB1                   <-------- ->TBP      --------->YAB1          ----------->TBP  <---------ARR11(3)                   <---------MYB46(3) --------AHL20(2)               ----------->GT1      --------->ARR14(2)                <------------CBF ------AHL20(2)                <---------TOE1(3)     <---------ARR14(3)   <---------YAB1 <---------AtMYB61 --AHL20(2)<---------YAB1      <---------TOE2(3)   ----------->ARR10  <---------ANAC58--------->ATHB12   tatatatatatatatcattacacaagagagtttaaggtataaatacaattagcgagatcttgtgattctaattcttgtgataccgaaaacattggtggcg  24789600                                     ------->MYC2                                     <-------MYC3                              <---------ANAC46                             <------NtERF2                            ------>NtERF2                           <---------DEAR3(1)                        <---------DEAR3(1)                          ------->GAMYB                        <---------DREB2C(2)                         <---------SPL7                        <---------ANAC46                           --------->ANAC58             -----         <---------REM1(1) --------->ALFIN1    <-----------RAV1(1) --------->ANAC58   ------->GAMYB ----ANAC58          ----------->HVH21      <---------ALFIN1     ---------->DOF2   --------->MYB52(1) ----ANAC58          ----------->TGA1<-------MYC2       <---------ICU4 --------->ANAC58         <---- ----ANAC46       <---------DEAR3(1) ------->MYC3      --------->ICU4--------->MYB52(1) <---------ANAC46 -DEAR3(1)    <------ZmHOX2a(1)  <---------ARR14(2)    <---------ATHB51--------->ANAC58 ----------->GT1   agagagagatggtgaaggagacggtgacggtggcgaaaacgtgctcacactgtggccataatggccataacgcacggacttgtctcaacggcgttaataa  24789700                                                 <------NtERF2                                                 ----------->RAV1(2)                                                ------>NtERF2                                                <------NtERF2  <----------DOF2                                                <---------ATERF1(1)                                     ------>ZmHOX2a(2)   <---------DOF5.7(2)                                    <-----------------AGL1    <---------ANAC46                                   <---------ARR14(2)    --------->MYB52(1)                         <---------AHL20(1)    --------->RAP2.6(2)   <------ZmHOX2a(1)        <-----------GT1  --------->ARR11(3)    --------->DEAR3(1)  <---------TOE2(3)   <---------ZAT6        <---------AHL20(2)   <---------RAP2.6(2)  <---------TOE1(3)   ----------->GT1       --------->AHL20(1)--------->MYB59  ------->GAMYB ---->DAG2     <---------DEAR3(1)  --------->ARR14(2)   ----------->HVH21                  --------->TOE2(3) -----TOE2(3) --------->SPL7   ----------->RAV1(2)   <---------TOE2(3)                  --------->GLK1(1)   ggcaagtgttaaactgttcggcgttaatatatcgtctgatccgattaggccgcctgaggtaacggcgttaaggaagagtcttagtttgggaaaccttgat  24789800                                                 <---------MYB52(1)                                                <-------GAMYB                                               --------->DEAR3(1)                                              <------NtERF2                                             ------>NtERF2                                            --------->RAP2.3(2)                                            --------->RRTF1(3)                                            --------->ANAC46                                            --------->RAP2.3(3)                                            --------->DEAR3(1)                                            <---------DEAR3(1)                                           --------->RAP2.3(1)                           <-----------                                           --------->ATERF1(1)                           ------------                        ------->GAMYB      --------->DEAR4(2)                           <------------                     --------->MYB52(1)    --------->ERF1                               -------------                   <---------MYB52(2)      --------->ORA47(2)                           -------------                ---------->DOF2           <---------RAP2.3(1)                      <-------TEIL              <---------YAB1          ------>ZmHOX2a(1)           <---------ICU4 <---------GLK1(2)          <---------TOE2(3)         ------>ZmHOX2a(2)    --------->MYB52(1)<---------MYB46(3)   -----         <---------DOF5.7(2)   --------->At5g28300   <---------YAB1      <---------MYB52(1)    ------         --------->MYB52(1)  <---------ANAC46--------->ABI4(1)   <---------YAB1 --------->At4g35610   gctcttctcgctaacgatgaaagtaacggtagcggtgatcctatcgccgccgttgatgataccggttatcattccgatggtcagattcattccaagaagg  24789900                           --------->ANAC55(1)                           --------->ANAC58                           --------->ANAC58                           <---------ANAC55(2)                                   --------->YAB1 ----AGL15                 --------->ANAC55(2)                            --------->AHL20(2) --->AGL15                --------->SPL7                                  <---------AHL20(2)        - -----AGL1                <-------TEIL                               --------->AHL20(2)             - ---->AG              <---------------AtSPL8                         --------->YAB1  --------->WOX13(1) ---->AGL1            <---------------AtSPL3                        <---------ATHB12<---------AHL20(2) ------>GT1         --------->DAG2                        --------->TOE2(3)   --------->YAB1   <----- ----->GT1         ---------->DOF2                      --------->GLK1(2)--------->AHL20(2)   <------   gtaaaactgctcatgagaagaaaaagggtacgtaatcttctaatctcatcaatttgataatctaaattcaatgaaattaataagaataaatcaaattcag  24790000                                                                                                  ---                                                                                                  ---                                                                                             <-------                                                                                             --------                                                                                           --------->REM1(2)                                                                                        <---------ANAC58         --------->ANAC58                                                               --------->ANAC55(2) -------->ANAC58                                                                        <---------ANAC46 -------->ANAC58       ----------->GT1                   --------->DAG2                 <---------ANAC55(2) ----LBD16     >>>>>>>>>TBF1          ----------->GT1   ---------->DOF2                 <---------ANAC58 ---LBD16--------->ANAC58      --------->TOE2(3)   <---------LBD16                      <---------ANAC55(1)   ggaagccatggacggaagaagaacatcgtaatttcttaatcggtttaaacaaactcggaaaaggagattggagaggcattgcaaagagtttcgtgtcgac  24790100  Previous    Next  AGI:  At5g61620.1    Description:  myb family transcription factor. similar to myb family transcription factor [Arabidopsis thaliana] (TAIR:AT5G47390.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN76720.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO62318.1); contains InterPro domain Zinc finger, CCHC-type; (InterPro:IPR001878); contains InterPro domain SANT, DNA-binding; (InterPro:IPR001005); contains InterPro domain Homeodomain-like (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding (InterPro:IPR014778); contains InterPro domain Myb-like DNA-binding region, SHAQKYF class (InterPro:IPR006447) Range:  from: 24789609    to: 24790733    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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