Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                   ------->TEIL                                         <---------ARR11(3)                                 --------->GLK1(2)                                    --------->ARR11(3)                              --------->ANAC58                                       --------->GLK1(1)                              --------->ANAC58          <---------ANAC55(2)          <---------GLK1(1)                          <------ZmHOX2a(1)             --------->ANAC58             <---------CCA1(2)                      ---------->DOF2                   --------->ANAC55(2)         --------->ARR14(2)                    =============HOX2a_HOX2a            --------->ANAC46        <---------LBD16     < ----------GT1      <------ZmHOX2a(2)      ----------------->AGL1  --------->CCA1(2)<---------ARR14(2) --->YAB1     <-----------GT1 --------->ANAC46          --------->ANAC58 <------ZmHOX2a(1)        <--   ttatccaaacatatattcacagatcaaaggacacgaatctaaatttccaaatcgaatcacgaaatctagataagaggacttactcggatatctctagatt  24472800                                                                                                   --                                                                                                   <-                                                                                                <----                                                                                               <-----                                                                                               <-----                                                                                              <------                                                                                             <-------              --------->GLK1(1)                                                 <---------MYB52(1)<--              <---------GLK1(1)                                   --------->ANAC58           <-------            --------->ZAT14                                       --------->ANAC58           <-------       <---------ZAT14           --------->YAB1              ----------->HVH21 <-------GAMYB <------- ------ZmHOX2a(1)  --------->LBD16                     ------>NtERF2       <---------ALFIN1 --------- -------TOE2(3)  <---------LBD16<------ZmHOX2a(2)     <---------ALFIN1  --------->YAB1     --------->MYB52(1)   gaggatgagaacagagaactccggtacaagtccgatcagaaatttgaagagcatcgacaccgcttgacaagctatcaacaccgttggaagaagtagcggc  24472900                                                <----------DOF2                                              <---------At4g35610                                              --------->ZAT2                                           --------->At4g35610                                           --------->ZAT2                                           <------NtERF2                                           <---------At4g35610                                           <---------ZAT2                                          ----------->RAV1(1)                                          =======================RAV                                         <-----------RAV1(2)                                        <------NtERF2                                        --------->At4g35610                                        --------->ATERF1(1)                                        <---------At4g35610                                       <---------RAP2.3(1)                                       ----------->RAV1(1)                                       <---------ATERF1(1)                                       ==========================RAV                                       ------>NtERF2                                      --------->ATERF1(2)                                      <---------DEAR3(1)                                      <---------ATERF1(2)                                      <---------RAP2.3(2)                                      <---------RAP2.6(2)                                     --------->RAP2.3(1)                                     --------->ATERF1(1)    <---------AtLEC2                 --------->At4g35610 ------->ARR14(2)                    <------NtERF2 --------ARR14(2)                   <---------RAP2.3(1) -----ANAC46                        <---------ATERF1(1) ----LBD16<---------At4g35610       <---------RRTF1(1) -NtERF2  --------->At4g35610<----------DOF2  --------->At4g35610             <-----------TGA1 ---RAP2.3(1)          <---------ALFIN1<---------ERF1        ------>NtERF2    <-----------HVH21 --DEAR3(1)         <-----------GT1<---------RAP2.3(2)    <---------ZAT2 <---------ANAC58 ----NtERF2       <---------DAG2   <---------DEAR3(1)     --------->At4g35610<---------ANAC58 --RRTF1(3)       <----------DOF2  <---------RAP2.6(2)    --------->ZAT2 <---------ANAC58 --RAP2.6(2)    --------->At4g35610<---------RRTF1(3)     <---------At4g35610<---------ANAC58 --RAP2.3(2) --------->At4g35610  <---------At4g35610<---------At4g35610--------->STY1(2)          <- >At4g35610  <---------At4g35610  --------->At4g35610----------->RAV1(2)<---------STY1(2)          --   ggatttggatggagcagcagctttaccacctcttttagcggcggcagcagctttcttctgagctgccttcttcttgctagcgtcagacaccatcttcaaa  24473000                                                              ----------->GT1                                                              <---------ZAT6              -----------                                                        <---------YAB1             <---------LBD16                                                     --------->ARR14(2)           <---------ANAC46      --------->LBD16                                <---------ARR14(2)         <---------ARR14(2)  < ----------GT1                   --------->YAB1 --------->REM1(2)               ------->TEIL<------ZmHOX2a(1) ------->ARR11(3) <------ZmHOX2a(2)            --------->ALFIN1            --------->MYB52(1)    ----   ttatctccctgagaaaacagatcaaatccaaactataagaaatcaaaccgtggagaatacgatagagataatagaatcaacgaatcgtggaagaggaaat  24473100                                   <---------ARR14(2)                                   --------->ARR14(2)                           <---------AGP1                           <---------ARR11(3)                           <---------ARR14(3)                           --------->ARR14(2)                           <---------ARR14(2)                           --------->AGP1                           --------->ARR11(3)                     <---------LBD16                    <-------TEIL   --------->AGP1                   --------->GLK1(2)                   --------->ARR14(1)                   --------->CCA1(2)                  --------->ARR14(2)                  --------->ARR11(1)                  <---------GLK1(2)<---------AGP1                 <---------HSFB2a(1) ------>ZmHOX2a(2)                 --------->HSFB2a(1)<------ZmHOX2a(2)                 <---------HSFC1(2)<---------ARR11(3)           --------->TOE2(2)       --------->ARR11(3)           <---------LBD16--------->GLK1(1)           --------->TOE1(2)<------ZmHOX2a(2)          ----------->RAV1(2)------>ZmHOX2a(2)                                                  *TSS    --------->AHL20(2)    <---------GLK1(1)                                                    ------    <---------AHL20(2)   ----------->ARR10                                  <---------ZAT6     ------    --------->AHL20(1)<---------HSFB2a(2)        --------->At4g35610       <---------TOE1(3) <------- >GT1   <-----------GT1--------->LBD16           <---------At4g35610 --------->ICU4          <-------GAMYB ---------AHL20(2)<---------ARR14(2)--------->CCA1(2)           ----------->GT1       <---------MYB46(3) ------->GT1    ----------->ARR10 <---------CCA1(2) --------->At4g35610    <---------TOE2(3)<--------   agtaaattttttacctgggagattcgggagatctgtagatctagggttttcagcagaagacgagttcggcaaaaattagggttaatggtggtttctgttg  24473200                                                             <------NtERF2                                                            ------>NtERF2                                                        <---------DEAR3(1)                                                   <-------MYC3                                                   ------->MYC3                                                   <-------PIF5                                                   <-------MYC2                                                   <-------MYC4                                                   ------->MYC2                                                   ------->PIF5                                                  ===================================bZIP_DOF                                                  <---------TGA1a                                                  --------->O2                                                  <---------O2<---------ALFIN1                   ----                                                  <------------------SPL14                     <-----                                                  ==============================================MYC_MYB                                                  <---------ANAC46                          <--------                                       --------->HSFB2a(2)  ----------->RAV1(1)             <--------                                 <---------WOX13(1)------->MYC4                             ---------                          <------ZmHOX2a(1)--------->ALFIN1----------->HVH21                <--------          <---------HSFB2a(1)   <------------CBF  --------->TGA1a                           <--------          <---------HSFC1(2)   --------->ATHB12   <--------ABF1                         <-------GAMYB       <------NtERF2 <---------AHL20(2)<---------ANAC46--------->SPL7                   <---------At4g35610 ----->HVH21       <-----------TBP     <---------HSFB2a(2) --------->DEAR3(1)           --------->At4g35610 --->WRKY12     <---------MYB52(1)    <---------LBD16--------->REM1(2)    <----------DOF2   <-------- --At4g35610--------->GLK1(2) <---------YAB1      <---------ANAC55(2)    <---------ANAC58  <--------- ---RAV1(1)<---------ARR14(2) --------->ICU4    <---------ALFIN1         <---------ANAC58<---------MYB52(1)   acgcgaggcggaagaatcggtatttataggagatgattgttctgggtgtgccacgtgtacggcgacactgagtttgctttctatattttcagttgcgtat  24473300                                                                      ---------->DOF2                                                                    <---------YAB1                                                                  <---------AHL20(2)                            <------MYB46(1)                       --------->YAB1                            <------MYB83                          -------->ATHB1                    -                            <---------DEAR3(2)                    -------->HAHB4                  ---       <---------ALFIN1    <---------DEAR3(1)                     --------->ATHB51               <--- ----->YAB1                --------->MYB59                        <--------HAHB4                <---- ----ARR14(2)          <---------AtMYB61                          <---------ICU4                ----- -ANAC55(2)      <---------ZAT14  --------->LBD16                --------->ICU4                 <---- -ANAC58      ------>MYB83 <---------MYB46(3)                    <---------ATHB51              <----- >ANAC55(2)   ------>MYB46(1)    --------->LBD16                 <---------YAB1          <------MYB83 -ANAC46    <---------MYB111(1) --------->HSFB2a(2)           <---------AHL20(2)         <------MYB46(1) -ANAC58------->GAMYB<----------DOF2                          --------->AHL20(2)     --------->MYB111(1) -ANAC55(1) <---------MYB111(2) <---------HSFB2a(2)         <----------DOF2          --------->MYB111(2) --------------TaNAC69(2) <---------ORA47(1)    <----------DOF2--------->YAB1   <---------ATHB12-----   cagaatacaacacacctacttcactttggtcggtcccgaataatgtgcttcttttatatgggctttaattattaaaggcccaataagtagttggtaagga  24473400   ----------->GT1 ----->ZmHOX2a(1) --->ZmHOX2a(2) ---ZmHOX2a(2)                                                                                 <----- -----ARR11(3)                     <------MYB83                                             <-------- ---->ARR11(3)                     <------MYB46(1)                                <---------ARR14(2) -----ARR14(2)                    <---------MYB46(3)             --------->AtLEC2 --------->ARR14(2) -ZmHOX2a(1)                     --------->ALFIN1            ------>NtERF2       <---------GLK1(2)<-- ---->ARR14(2)            <----------DOF2             <---------ATHB12     --------->ANAC46 ---------   tcctgaagtgaataagagaagcccaaggcttttaagtgggtcgttttattctcccaatgcttcggccttgcaactataggccagtttctgcaaatgtctt  24473500         <---------AHL20(2)       <---------AHL20(2)     <---------AHL20(2)    --------->AHL20(1)                                                                    -----------    --------->ARR11(3)                                                                    <----------    <---------AHL20(1)                                                            --------->ANAC46    --------->AHL20(2)                                                            --------->ANAC58    <---------AHL20(2)                                                            --------->ANAC58    <---------ARR11(3)                   ------->MYC2                            <---------LBD16 -----DOF2                               <-------MYC3                        --------->GLK1(2) -ARR11(3)                ---------->ID1 <-------MYC2                        <---------ARR14(2) ---------GT1     ---------->ID1         ------->MYC3 <-----------RAV1(1)    <-----------ARR10  <---- >ARR11(3) <------------------------ANAC81            --------->ALFIN1       --------->ARR14(2) <----   ttacaatatattttttttttgtttttttgtttttttttgggcatgtgttaacatatgtgttgcaatctacagccttgagaatccacgcagtagatgtaca  24473600               --------->YAB1               <---------ICU4              <---------YAB1          --------->ARR11(3) --------->ANAC58                     <---------ARR11(3) --------->ANAC46--------->ICU4      <------MYB83              <----------DOF2 --------->ANAC58<---------YAB1  --------->ATHB12            <---------At4g35610 ---->AtSPL3  --------->ICU4    <---------YAB1    <---------AHL20(2) -----AtSPL8--------->YAB1  <---------ARR11(3)    --------->AHL20(2) -----------AtSPL3          --------->ARR11(3)   --------->AHL20(2)            <---------GLK1(2) -----------AtSPL8     ------->TEIL  <------MYB46(1)         --------->At4g35610                <----   agtacgaaactcattcatgatgatgaacatgatattgataggtcttatccattaaattctatcagcttttgtgttctacttgattcttgtagatagactg  24473700  Previous    Next  AGI:  At5g60790.1    Description:  ATGCN1 (Arabidopsis thaliana general control non-repressible 1). similar to ATGCN3 (Arabidopsis thaliana general control non-repressible 3) [Arabidopsis thaliana] (TAIR:AT1G64550.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO16780.1); similar to ATP-binding cassette transporter [Pteris vittata] (GB:AAS77222.1); similar to unknown [Picea sitchensis] (GB:ABK24586.1); contains InterPro domain ABC transporter related; (InterPro:IPR003439); contains InterPro domain AAA+ ATPase, core; (InterPro:IPR003593) Range:  from: 24470484    to: 24473196    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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