Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                   ------->TEIL                                         --------->ARR11(3)                                 --------->GLK1(2)                                    <---------ARR11(3)                              --------->ANAC58                                       --------->GLK1(1)                              --------->ANAC58          <---------ANAC55(2)          <---------GLK1(1)                          <------ZmHOX2a(1)             --------->ANAC58             <---------CCA1(2)                      ---------->DOF2                   --------->ANAC55(2)         <---------ARR14(2)                    =============HOX2a_HOX2a            --------->ANAC58        <---------LBD16     < ----------GT1      <------ZmHOX2a(2)      ----------------->AGL1  --------->CCA1(2)--------->ARR14(2) --->YAB1     <-----------GT1 --------->ANAC46          --------->ANAC46 <------ZmHOX2a(1)        <--   ttatccaaacatatattcacagatcaaaggacacgaatctaaatttccaaatcgaatcacgaaatctagataagaggacttactcggatatctctagatt  24472800                                                                                                   --                                                                                                   <-                                                                                                <----                                                                                               <-----                                                                                               <-----                                                                                              <------                                                                                             <-------              <---------GLK1(1)                                                 <---------MYB52(1)<--              --------->GLK1(1)                                   --------->ANAC58           <-------            --------->ZAT14                                       --------->ANAC58           <-------       <---------ZAT14           --------->YAB1              ----------->HVH21 <-------GAMYB <------- ------ZmHOX2a(1)  --------->LBD16                     ------>NtERF2       <---------ALFIN1 --------- -------TOE2(3)  <---------LBD16<------ZmHOX2a(2)     <---------ALFIN1  --------->YAB1     --------->MYB52(1)   gaggatgagaacagagaactccggtacaagtccgatcagaaatttgaagagcatcgacaccgcttgacaagctatcaacaccgttggaagaagtagcggc  24472900                                                <----------DOF2                                              <---------At4g35610                                              --------->ZAT2                                           --------->ZAT2                                           --------->At4g35610                                           <------NtERF2                                           <---------At4g35610                                           <---------ZAT2                                          ----------->RAV1(1)                                          =======================RAV                                         <-----------RAV1(2)                                        <---------At4g35610                                        --------->At4g35610                                        --------->ATERF1(1)                                        <------NtERF2                                       <---------RAP2.3(1)                                       ----------->RAV1(1)                                       <---------ATERF1(1)                                       ==========================RAV                                       ------>NtERF2                                      --------->ATERF1(2)                                      <---------DEAR3(1)                                      <---------ATERF1(2)                                      <---------RAP2.3(2)                                      <---------RAP2.6(2)                                     --------->ATERF1(1)                                     --------->RAP2.3(1)    <---------AtLEC2                 --------->At4g35610 ------->ARR14(2)                    <------NtERF2 --------ARR14(2)                   <---------RAP2.3(1) -----ANAC46                        <---------ATERF1(1) ----LBD16--------->At4g35610       <---------RRTF1(1) -NtERF2  <---------At4g35610<----------DOF2  --------->At4g35610             <-----------HVH21 ---RAP2.3(1)          <---------ALFIN1<---------ERF1        ------>NtERF2    <-----------TGA1 --RRTF1(3)         <-----------GT1<---------RRTF1(3)     --------->At4g35610<---------ANAC58 ----NtERF2       <----------DOF2  <---------RAP2.3(2)    --------->ZAT2 <---------ANAC58 --RAP2.6(2)      <---------DAG2   <---------DEAR3(1)     <---------At4g35610<---------ANAC58 --RAP2.3(2)    --------->At4g35610<---------RAP2.6(2)    <---------ZAT2 <---------ANAC58 --DEAR3(1)  --------->At4g35610  <---------At4g35610----------->RAV1(2)<---------STY1(2)          <- >At4g35610  <---------At4g35610  --------->At4g35610<---------At4g35610--------->STY1(2)          --   ggatttggatggagcagcagctttaccacctcttttagcggcggcagcagctttcttctgagctgccttcttcttgctagcgtcagacaccatcttcaaa  24473000                                                              ----------->GT1                                                              <---------ZAT6              -----------                                                        <---------YAB1             <---------LBD16                                                     <---------ARR14(2)           <---------ANAC46      --------->LBD16                                --------->ARR14(2)         <---------ARR14(2)  < ----------GT1                   --------->YAB1 --------->REM1(2)               ------->TEIL<------ZmHOX2a(1) ------->ARR11(3) <------ZmHOX2a(2)            --------->ALFIN1            --------->MYB52(1)    ----   ttatctccctgagaaaacagatcaaatccaaactataagaaatcaaaccgtggagaatacgatagagataatagaatcaacgaatcgtggaagaggaaat  24473100                                   <---------ARR14(2)                                   --------->ARR14(2)                           <---------ARR14(3)                           --------->ARR14(2)                           <---------ARR11(3)                           --------->ARR11(3)                           <---------AGP1                           --------->AGP1                           <---------ARR14(2)                     <---------LBD16                    <-------TEIL   --------->AGP1                   --------->CCA1(2)                   --------->GLK1(2)                   --------->ARR14(1)                  <---------ARR14(2)                  --------->ARR11(1)                  --------->ARR14(2) ------>ZmHOX2a(2)                 <---------HSFB2a(1)--------->CCA1(2)                 --------->HSFB2a(1)<------ZmHOX2a(2)                 <---------HSFC1(2)--------->ARR11(3)           --------->TOE1(2)       <---------AGP1           --------->TOE2(2)<------ZmHOX2a(2)           <---------LBD16--------->GLK1(1)          ----------->RAV1(2)------>ZmHOX2a(2)                                                  *TSS    --------->AHL20(1)    <---------GLK1(1)                                                    ------    <---------AHL20(2)   ----------->ARR10                                  <---------ZAT6     ------    --------->AHL20(2)<---------HSFB2a(2)        --------->At4g35610       <---------TOE1(3) <-------GAMYB >GT1   <-----------GT1--------->LBD16           <---------At4g35610 --------->ICU4          <------- ---------AHL20(2)<---------GLK1(2)<---------ARR11(3)           ----------->GT1       <---------MYB46(3) ------->GT1    ----------->ARR10 <---------CCA1(2) --------->At4g35610    <---------TOE2(3)<--------   agtaaattttttacctgggagattcgggagatctgtagatctagggttttcagcagaagacgagttcggcaaaaattagggttaatggtggtttctgttg  24473200                                                             <------NtERF2                                                            ------>NtERF2                                                        <---------DEAR3(1)                                                   <-------MYC3                                                   <-------PIF5                                                   ------->MYC2                                                   ------->MYC4                                                   ------->MYC3                                                   <-------MYC4                                                   ------->PIF5                                                  --------->O2                                                  <---------O2<---------ALFIN1                                                  <---------TGA1a                                                  --------->TGA1a                                ----                                                  <------------------SPL14                  <--------                                                  <--------ABF1                             <--------                                                  <---------ANAC55(2)                       <--------                                       --------->HSFB2a(2)  ----------->RAV1(1)             <--------                                 <---------WOX13(1)<-------MYC2                             ---------                          <------ZmHOX2a(1)--------->ALFIN1--------->DEAR3(1)           --------->At4g35610          <---------HSFC1(2)    <------------CBF  ==============================================MYC_MYB          <---------HSFB2a(1)  --------->ATHB12   ===================================bZIP_DOF  <-----       <------NtERF2 <---------AHL20(2)<---------ANAC46--------->SPL7                   <-------GAMYB --->WRKY12        <-----------TBP     <---------HSFB2a(2) ----------->HVH21            <---------At4g35610 ----->HVH21    <---------MYB52(1)    <---------LBD16--------->REM1(2)    <----------DOF2   <-------- --At4g35610--------->GLK1(2) <---------YAB1      <---------ANAC46       <---------ANAC58  <--------- ---RAV1(1)<---------ARR14(2) --------->ICU4    <---------ALFIN1         <---------ANAC58<---------MYB52(1)   acgcgaggcggaagaatcggtatttataggagatgattgttctgggtgtgccacgtgtacggcgacactgagtttgctttctatattttcagttgcgtat  24473300                                                                      ---------->DOF2                                                                    <---------YAB1                                                                  <---------ICU4                            <------MYB46(1)                       <---------AHL20(2)                            <------MYB83                          -------->HAHB4                    -                            <---------DEAR3(2)                    --------->YAB1                  ---       <---------ALFIN1    <---------MYB46(3)                     --------->ATHB51               <--- ----->YAB1                --------->MYB59                        -------->ATHB1                ----- -ANAC58               <---------AtMYB61                          <--------HAHB4                <---- -ANAC46         <---------ZAT14  --------->LBD16                <---------YAB1                 ----- -ANAC58------->GAMYB<----------DOF2                             --------->ICU4                <----- -ANAC55(1)   ------>MYB83 <---------DEAR3(1)                    <---------ATHB51        <------MYB46(1) >ANAC55(2) <---------MYB111(1)  --------->LBD16              --------->AHL20(2)         <------MYB83 ----ARR14(2) ------>MYB46(1)   <---------HSFB2a(2)           <---------AHL20(2)     --------->MYB111(2) -ANAC55(2) <---------MYB111(2) --------->HSFB2a(2)         <----------DOF2          --------->MYB111(1) --------------TaNAC69(2) <---------ORA47(1)    <----------DOF2--------->YAB1   <---------ATHB12<----   cagaatacaacacacctacttcactttggtcggtcccgaataatgtgcttcttttatatgggctttaattattaaaggcccaataagtagttggtaagga  24473400   ----------->GT1 ----->ZmHOX2a(1) --->ZmHOX2a(2) ---ZmHOX2a(2)                                                                                 <----- ---->ARR14(2)                     <------MYB46(1)                                          <-------- -----ARR11(3)                     <------MYB83                                   <---------ARR14(2) ---->ARR11(3)                    <---------MYB46(3)             --------->AtLEC2 --------->ARR14(2) -ZmHOX2a(1)                     --------->ALFIN1            ------>NtERF2       <---------GLK1(2)<-- -----ARR14(2)            <----------DOF2             <---------ATHB12     --------->ANAC46 ---------   tcctgaagtgaataagagaagcccaaggcttttaagtgggtcgttttattctcccaatgcttcggccttgcaactataggccagtttctgcaaatgtctt  24473500         <---------AHL20(2)       <---------AHL20(2)     <---------AHL20(2)    --------->AHL20(1)                                                                    -----------    <---------AHL20(1)                                                                    <----------    --------->AHL20(2)                                                            --------->ANAC46    --------->ARR11(3)                                                            --------->ANAC58    <---------AHL20(2)                                                            --------->ANAC58    <---------ARR11(3)                   <-------MYC2                            <---------LBD16 -----DOF2                               <-------MYC3                        <---------ARR14(2) -ARR11(3)                ---------->ID1 ------->MYC2                        --------->ARR14(2) ---------GT1     ---------->ID1         ------->MYC3 <-----------RAV1(1)    <-----------ARR10  <---- >ARR11(3) <------------------------ANAC81            --------->ALFIN1       --------->GLK1(2)  <----   ttacaatatattttttttttgtttttttgtttttttttgggcatgtgttaacatatgtgttgcaatctacagccttgagaatccacgcagtagatgtaca  24473600               --------->YAB1               <---------ICU4              --------->ICU4          --------->ARR11(3) --------->ANAC46                     <---------ARR11(3) --------->ANAC58<---------YAB1      <------MYB83              <----------DOF2 --------->ANAC58--------->ICU4  --------->ATHB12            <---------At4g35610 ---->AtSPL3  <---------YAB1    <---------YAB1    <---------AHL20(2) -----AtSPL8--------->YAB1  <---------ARR11(3)    --------->AHL20(2) -----------AtSPL3          --------->ARR11(3)   --------->AHL20(2)            <---------GLK1(2) -----------AtSPL8     ------->TEIL  <------MYB46(1)         --------->At4g35610                <----   agtacgaaactcattcatgatgatgaacatgatattgataggtcttatccattaaattctatcagcttttgtgttctacttgattcttgtagatagactg  24473700  Previous    Next  AGI:  At5g60790.1    Description:  ATGCN1 (Arabidopsis thaliana general control non-repressible 1). similar to ATGCN3 (Arabidopsis thaliana general control non-repressible 3) [Arabidopsis thaliana] (TAIR:AT1G64550.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO16780.1); similar to ATP-binding cassette transporter [Pteris vittata] (GB:AAS77222.1); similar to unknown [Picea sitchensis] (GB:ABK24586.1); contains InterPro domain ABC transporter related; (InterPro:IPR003439); contains InterPro domain AAA+ ATPase, core; (InterPro:IPR003593) Range:  from: 24470484    to: 24473196    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.