Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                   <---------ANAC58                 <---------ANAC58           <---------TOE2(3)                       --------->ANAC46         <---------AHL20(2)                      <---------DOF5.7(2)                <---------ARR14(2)        <---------AHL20(2)                     --------->DOF5.7(2)              <---------HSFB2a(2)        --------->AHL20(2)                    --------->TOE2(3)              --------->ARR11(3)        --------->AHL20(1)                   --------->ANAC55(1)    <---------TOE1(3)   ------>MYB83  <---------ANAC46            --------->ANAC58       <---------TOE2(3)   ------>MYB46(1)                           --------->ANAC46      <---------DOF5.7(2)  ----------->RAV1(1)                        <---------ANAC55(2)   --------->MYB52(1) -------->MYB46(3)       --------->AHL20(2)  --------->ANAC58---------->DOF2<---------GLK1(1) ->DOF2 <---------AHL20(1)   ----------->GT1 --------->ANAC55(2) --------->DOF5.7(2)--------->ARR14(2)   aaaccaacaatataatgtttcgttttataaaatgtgaaaaatttcatacgtaaacgaaaacataaaagttaacgtttgaaatctcgaaactgcaagtgtg  24169900                          --------->LBD16                          <---------ATERF1(1)                          ------>NtERF2                        <---------LBD16                      ------>ZmHOX2a(2)                     <---------GLK1(1)                     <------ZmHOX2a(2)                    <---------AGP1                    <---------ARR11(3)                    --------->ARR14(2)                    --------->ARR11(3)                    <---------ARR14(2)                    <---------ARR14(3)                                           <------NtERF2                    --------->ARR14(3)                                           <---------At4g35610                  ----------->ARR10                                              --------->At4g35610             <---------ANAC46                                     <---------TOE2(3)                 -             <---------ANAC58                                     <---------TOE1(3)            ------             <---------ANAC58                                    <---------DOF5.7(2)          <------             <---------ANAC55(1)--------->MYB52(1)             --------->DOF5.7(2) <---------ANAC46 -            <---------LBD16   <----------CDC5                 --------->TOE2(3)<---------DEAR3(1)  --           --------->MYB52(1)------>NtERF2                    --------->TOE1(3)<---------RAP2.6(2)---         <---------ANAC58<---------DEAR3(1)               <---------ICU4 --------->YAB1       -------         <---------ANAC58--------->ANAC46                <---------YAB1  <---------ICU4      <-------   <---------AHL20(2)--------->GLK1(1)                 <---------ICU4    --------->ATHB12   ---------  --------->YAB1 <--------P--------->RAP2.3(1)         --------->YAB1   <---------ATHB12   <<<<<<<<<GT-2 <---------AHL20(2)<---------CCA1(2)                  <---------ATHB12  --------->ICU4     <---------   tatataatattacttacgggtagatctccggcgctaagggcccgtctcactggcccatcatcatcgttaacgaaatcatgggccgctgtgtaattaccgg  24170000                                                                                             <-------                                                                                             --------                                                                                            ---------                                                                                            <--------      --------->ATHB51                                                            <---------At4g35610     --------->ICU4                                                         <---------ZAT2<---------ALFIN1 -------->ANAC58                                                            <---------At4g35610 --->LBD16                                                                  --------->ZAT2--------->DEAR3(1) ---HSFB2a(2)                                     <---------ALFIN1          ----------->RAV1(2) -------->ANAC58                                <---------ALFIN1            --------->At4g35610 ------->DAG2           ------>ZmHOX2a(1)     --------->LBD16             <-----------RAV1(2)-------- ------->DOF2           --------->At4g35610   ------>NtERF2        <---------ANAC58       --------->AtMYB61 -->HSFB2a(2)     <---------ALFIN1           --------->ANAC46      <---------ANAC58      --------->MYB46(3) --LBD16          --------->ZAT6             --------->ANAC58 <---------ANAC58    --------->At4g35610 >MYB52(1)    <---------MYB52(2)             --------->ANAC58 <---------ANAC58 --------->At4g35610 <- --GT1<---------ICU4--------->ANAC46        <---------LBD16 --------->ARR11(3) <---------At4g35610<--   aaaagccattatggctactaacactcctctgcataacaagactctctccgccactccccatagagcttggcgagtcgcagctgctgcttccaccaccacc  24170100                                               <---------ARR14(2)                           <------NtERF2                                             --------->REM1(2)                             --------->LBD16       <------NtERF2             --------->DEAR3(1)                                       <---------ANAC46      <---------RAP2.6(3)        ------->GAMYB --------->REM1(2)                         <------NtERF2      --------->LBD16           --------->MYB46(3)                                     <---------DEAR3(1)     --------->LBD16   ------->TEIL        <------NtERF2                               --------->ALFIN1     --------->RAP2.6(2)      --------->ARR14(2)                                      --------->ATERF1(1)    <---------LBD16   ------>MYB83         ------>NtERF2                              <------NtERF2 --ALFIN1             ------>MYB46(1)      --------->LBD16                           <---------ATERF1(1) ->DEAR3(1)         ------->GAMYB--------->RAP2.6(2)                                <---------DEAR3(1) >MYB46(3)          <---------MYB59      <---------DEAR3(1)                         --------->ALFIN1< -MYB55(2)       --------->MYB52(1)     ------>NtERF2                              <---------LBD16  - ->AtMYB61  ---------->DOF2  ---------->DOF2<---------ANAC46               <----------ID1--------->ATERF1(1) ------TEIL--------->YAB1  --------->LBD16--------->RAP2.6(2)     --------->YAB1 --------->DAG2  ---- ---------HVH21  <-----------GT1--------->DEAR3(2)               <---------YAB1---------->DOF2 <-----   gttcatgccggaatcaaagtaaccgaaccctgaaaccgcctcggccgcgtatagagagttttggctcatcataagaagcgccaaaggcggaggcgggaac  24170200                                                                                                   --                                                                                              <------                                                                                              <------                                                                             <---------MYB46(3)    <-                                                                           <------NtERF2      -------                                                                          --------->LBD16     <------                                                                         --------->DEAR3(1)   <------                   --------->ZAT2                                       <---------LBD16       -------                   ----------->RAV1(2)                                  --------->ATERF1(1)   <------         --------->ICU4                                                 <------NtERF2         <------         <---------YAB1     --------->ATERF1(1)                        ------>NtERF2          -------       --------->YAB1       <------ZmHOX2a(1)                          <---------RAP2.3(1)    <------      <---------YAB1      --------->ALFIN1       <---------ZAT14      <---------DEAR3(1)      <------      --------->ICU4     <------ZmHOX2a(1)   <------NtERF2            --------->ETT(2)      <--------    --------->YAB1 <---------ZAT2          <---------DEAR3(1)       <-----------HVH21      ----------   <---------YAB1  <---------At4g35610    <------NtERF2            <-----------RAV1(1)     ----------   --------->ICU4  --------->At4g35610  <---------ANAC58         <-------GAMYB    <---------HSFB2a(2) --------->YAB1    ==============================RAV             <---------At4g35610     --------->At4g35610 ---------YAB1 --------->ANAC58         --------->ETT(2)         --------->At4g35610    --------->ALFIN1 -------->ICU4 --------->ANAC46         <---------ANAC46         ==================================== ----->ICU4    --------->ANAC58         <---------ANAC58     ======================================== ----At4g35610--------->WOX13(1)     <-----------RAV1(1)     ------------>AtMYB77 --------->HSFB2a(2)   tgatgatgatgatgatcaagcagctgaggaggagccactatgtcgtcggagtatagaaaacatggacagttgtcgccggaggttatagaagtgctgacgt  24170300     ------->MYC3     <-------MYC3  <---------ALFIN1 ------->ZAT18 ---O2 ---ANAC58 --------ZAT18 -->ANAC55(2) ---TGA1a ---ANAC55(1) -->TGA1a ---ANAC46 ---ANAC58 -->O2 ---ANAC55(2) ---bZIP60(2)         <------------CBF                                                         <----- -TGA2(2)           <---------AHL20(2)                                                         <----- ->HVH21  <---------MYB46(3)                 <---------ANAC46                                 <------ ->TGA1  <---------ANAC46                    <---------ANAC58                                 ------- ===MYC_MYB<------MYB83                  <----------DOF2                                    <-------- ===MYC_MYB<------MYB46(1)   <---------ANAC46<---------ANAC58              ----------->GT1<---------MYB46(3)   gtccacacatggtgggttttagtttattgtggtgtttatgtgtctttgtgtgtttgtttatgtgtgtgtgtgtgagtgagtgaaactcgaagtggtttgg  24170400                                        <-----------TGA1                                        <-----------HVH21                               --------->TGA2(2)                             --------->ANAC55(2)                             --------->bZIP60(1)                             <---------O2                             --------->O2                             <---------bZIP60(1)                             --------->TGA2(1)                             <---------TGA1a                             --------->TGA1a                             ===================================MYC_MYB                             <---------TGA2(1)                      --------->WRKY12                            ----------->STF1                  --------->MYB52(1)                            <-----------STF1            ------->GAMYB                           <---------TGA2(2)          <---------At4g35610        <---------WOX13(1)                           >>>>>>>>>>>AtbZIP1       <---------WRKY38(1)         <-----------------AG -MYB83                   ----------->TGA1  <---------At4g35610     --------->WRKY38(1)            -- -MYB46(1)              --------->At4g35610 ----------->RAV1(2)    --------->DOF5.7(2)            <-- ---AtMYB61             <---------At4g35610 --------->At4g35610    <---------MYB52(1)    <------ZmHOX2a(1) -->MYB59        <------ZmHOX2a(1)     --------->YAB1 --------->At4g35610  <----------DOF2   -------- -ANAC46     <------ZmHOX2a(1)<-----------TGA1      <---------WRKY12--------->WRKY45    ----------->GT1   tttctatttaacagaggaaggactgatgctgacgtcattaatcgtcatctgaagtcaactgacttaaccgttgacttcttttgactgactaggaaaaaag  24170500                                                                                                   <-                                                                                                   --                                                                                       --------->ANAC46             ---------->DOF2        <-----------HVH21                                  --------->ANAC58     <---------TOE2(3)     <---------ANAC58                              --------->ANAC58       -----     --------->MYB59    <----------DOF2                                  --------->ANAC58       <----  <----------DOF2      <---------DAG2                                    --------->ANAC46  <--------- ------->GLK1(2)      <---------ANAC58                          <---------YAB1         --------->ANAC58 -------GLK1(2)       <---------ANAC58                     --------->ANAC46            --------->ANAC55(1) -->DOF2  ----------->TBP  <---------ANAC58 <---------CCA1(2)<---------MYB52(1)--------->AHL20(1)  --   gaatctttaggtataaaaagagttgcctttcgttttcaggtcgcttctatctcactctcacccgttattcttcaaacgacatatattacacgaaattgaa  24170600                                                      <---------AHL20(2)                                                    <---------YAB1                                                  --------->ATHB51                                                  <---------AHL20(2)                                                  --------->AHL20(2)                                                  <---------ICU4                                                 --------->ICU4                                               <---------ICU4                                               --------->YAB1                                              <---------YAB1 --------ETT(1)                               --------->ICU4 ------->ANAC46                             --------->YAB1 ---->ARR14(2)                             ----------->GT1                          --------->YAB1 -----ARR14(2)                             <---------YAB1      <---------TOE2(3)   --------->AHL20(2) ---CBF      --------->ANAC46 --------->MYB52(2) <---------YAB1<---------TOE1(3) --------->TOE2(3) --------->HVH21 ----------->GT1         --------->YAB1        --------->MYB59 <---------YAB1   tccgacatgtattatacgaaggtgaatttggatagttgaacaaaaatgataattattttttcatttaggtttaaaaatgttttcattaaaaatagaacta  24170700                                                                                                  <--                                                                                                 ----                                                                                               ------                                                                                               <-----                                                                                              <------                                                                           <------ZmHOX2a(1)  <------                                                              --------->AHL20(2)              -------                                                              --------->YAB1                  <------                                              <---------WOX13(1)<---------YAB1         ----------->HVH21                                           --------->ICU4    <---------ATHB51          <---------ZAT6                                    <---------TOE2(3)      --------->WOX13(1)  ---------->DOF2-------   ctactaaaaacaaaaattcaaatatacttacttatatataggttactgattaatatgctatcaattataaatacagaggaagaaagctagtgacaaataa  24170800  Previous    Next  AGI:  At5g59990.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G41380.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21746.1); contains InterPro domain CCT (InterPro:IPR010402) Range:  from: 24168209    to: 24170310    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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