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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
<---------
ANAC58
<---------
ANAC58
<---------
TOE2(3)
--------->
ANAC46
<---------
AHL20(2)
<---------
DOF5.7(2)
<---------
ARR14(2)
<---------
AHL20(2)
--------->
DOF5.7(2)
<---------
HSFB2a(2)
--------->
AHL20(2)
--------->
TOE2(3)
--------->
ARR11(3)
--------->
AHL20(1)
--------->
ANAC55(1)
<---------
TOE1(3)
------>
MYB83
<---------
ANAC46
--------->
ANAC58
<---------
TOE2(3)
------>
MYB46(1)
--------->
ANAC46
<---------
DOF5.7(2)
----------->
RAV1(1)
<---------
ANAC55(2)
--------->
MYB52(1)
-------->
MYB46(3)
--------->
AHL20(2)
--------->
ANAC58
---------->
DOF2
<---------
GLK1(1)
->
DOF2
<---------
AHL20(1)
----------->
GT1
--------->
ANAC55(2)
--------->
DOF5.7(2)
--------->
ARR14(2)
aaaccaacaatataatgtttcgttttataaaatgtgaaaaatttcatacgtaaacgaaaacataaaagttaacgtttgaaatctcgaaactgcaagtgtg
24169900
--------->
LBD16
<---------
ATERF1(1)
------>
NtERF2
<---------
LBD16
------>
ZmHOX2a(2)
<---------
GLK1(1)
<------
ZmHOX2a(2)
<---------
AGP1
<---------
ARR11(3)
--------->
ARR14(2)
--------->
ARR11(3)
<---------
ARR14(2)
<---------
ARR14(3)
<------
NtERF2
--------->
ARR14(3)
<---------
At4g35610
----------->
ARR10
--------->
At4g35610
<---------
ANAC46
<---------
TOE2(3)
-
<---------
ANAC58
<---------
TOE1(3)
------
<---------
ANAC58
<---------
DOF5.7(2)
<------
<---------
ANAC55(1)
--------->
MYB52(1)
--------->
DOF5.7(2)
<---------
ANAC46
-
<---------
LBD16
<----------
CDC5
--------->
TOE2(3)
<---------
DEAR3(1)
--
--------->
MYB52(1)
------>
NtERF2
--------->
TOE1(3)
<---------
RAP2.6(2)
---
<---------
ANAC58
<---------
DEAR3(1)
<---------
ICU4
--------->
YAB1
-------
<---------
ANAC58
--------->
ANAC46
<---------
YAB1
<---------
ICU4
<-------
<---------
AHL20(2)
--------->
GLK1(1)
<---------
ICU4
--------->
ATHB12
---------
--------->
YAB1
<--------
P
--------->
RAP2.3(1)
--------->
YAB1
<---------
ATHB12
<<<<<<<<<
GT-2
<---------
AHL20(2)
<---------
CCA1(2)
<---------
ATHB12
--------->
ICU4
<---------
tatataatattacttac
gggtagatctccggcgctaagggcccgtctcactggcccatcatcatcgttaacgaaatcatgggccgctgtgtaattaccgg
24170000
<-------
--------
---------
<--------
--------->
ATHB51
<---------
At4g35610
--------->
ICU4
<---------
ZAT2
<---------
ALFIN1
-------->
ANAC58
<---------
At4g35610
--->
LBD16
--------->
ZAT2
--------->
DEAR3(1)
---
HSFB2a(2)
<---------
ALFIN1
----------->
RAV1(2)
-------->
ANAC58
<---------
ALFIN1
--------->
At4g35610
------->
DAG2
------>
ZmHOX2a(1)
--------->
LBD16
<-----------
RAV1(2)
--------
------->
DOF2
--------->
At4g35610
------>
NtERF2
<---------
ANAC58
--------->
AtMYB61
-->
HSFB2a(2)
<---------
ALFIN1
--------->
ANAC46
<---------
ANAC58
--------->
MYB46(3)
--
LBD16
--------->
ZAT6
--------->
ANAC58
<---------
ANAC58
--------->
At4g35610
>
MYB52(1)
<---------
MYB52(2)
--------->
ANAC58
<---------
ANAC58
--------->
At4g35610
<-
--
GT1
<---------
ICU4
--------->
ANAC46
<---------
LBD16
--------->
ARR11(3)
<---------
At4g35610
<--
aaaagccattatggctactaacactcctctgcataacaagactctctccgccactccccatagagcttggcgagtcgcagctgctgcttccaccaccacc
24170100
<---------
ARR14(2)
<------
NtERF2
--------->
REM1(2)
--------->
LBD16
<------
NtERF2
--------->
DEAR3(1)
<---------
ANAC46
<---------
RAP2.6(3)
------->
GAMYB
--------->
REM1(2)
<------
NtERF2
--------->
LBD16
--------->
MYB46(3)
<---------
DEAR3(1)
--------->
LBD16
------->
TEIL
<------
NtERF2
--------->
ALFIN1
--------->
RAP2.6(2)
--------->
ARR14(2)
--------->
ATERF1(1)
<---------
LBD16
------>
MYB83
------>
NtERF2
<------
NtERF2
--
ALFIN1
------>
MYB46(1)
--------->
LBD16
<---------
ATERF1(1)
->
DEAR3(1)
------->
GAMYB
--------->
RAP2.6(2)
<---------
DEAR3(1)
>
MYB46(3)
<---------
MYB59
<---------
DEAR3(1)
--------->
ALFIN1
<
-
MYB55(2)
--------->
MYB52(1)
------>
NtERF2
<---------
LBD16
-
->
AtMYB61
---------->
DOF2
---------->
DOF2
<---------
ANAC46
<----------
ID1
--------->
ATERF1(1)
------
TEIL
--------->
YAB1
--------->
LBD16
--------->
RAP2.6(2)
--------->
YAB1
--------->
DAG2
----
---------
HVH21
<-----------
GT1
--------->
DEAR3(2)
<---------
YAB1
---------->
DOF2
<-----
gttcatgccggaatcaaagtaaccgaaccctgaaaccgcctcggccgcgtatagagagttttggctcatcataagaagcgccaaaggcggaggcgggaac
24170200
--
<------
<------
<---------
MYB46(3)
<-
<------
NtERF2
-------
--------->
LBD16
<------
--------->
DEAR3(1)
<------
--------->
ZAT2
<---------
LBD16
-------
----------->
RAV1(2)
--------->
ATERF1(1)
<------
--------->
ICU4
<------
NtERF2
<------
<---------
YAB1
--------->
ATERF1(1)
------>
NtERF2
-------
--------->
YAB1
<------
ZmHOX2a(1)
<---------
RAP2.3(1)
<------
<---------
YAB1
--------->
ALFIN1
<---------
ZAT14
<---------
DEAR3(1)
<------
--------->
ICU4
<------
ZmHOX2a(1)
<------
NtERF2
--------->
ETT(2)
<--------
--------->
YAB1
<---------
ZAT2
<---------
DEAR3(1)
<-----------
HVH21
----------
<---------
YAB1
<---------
At4g35610
<------
NtERF2
<-----------
RAV1(1)
----------
--------->
ICU4
--------->
At4g35610
<---------
ANAC58
<-------
GAMYB
<---------
HSFB2a(2)
--------->
YAB1
==============================
RAV
<---------
At4g35610
--------->
At4g35610
---------
YAB1
--------->
ANAC58
--------->
ETT(2)
--------->
At4g35610
--------->
ALFIN1
-------->
ICU4
--------->
ANAC46
<---------
ANAC46
====================================
----->
ICU4
--------->
ANAC58
<---------
ANAC58
========================================
----
At4g35610
--------->
WOX13(1)
<-----------
RAV1(1)
------------>
AtMYB77
--------->
HSFB2a(2)
tgatgatgatgatgatcaagcagctgaggaggagccactatgtcgtcggagtatagaaaacatggacagttgtcgccggaggttatagaagtgctgacgt
24170300
------->
MYC3
<-------
MYC3
<---------
ALFIN1
------->
ZAT18
---
O2
---
ANAC58
--------
ZAT18
-->
ANAC55(2)
---
TGA1a
---
ANAC55(1)
-->
TGA1a
---
ANAC46
---
ANAC58
-->
O2
---
ANAC55(2)
---
bZIP60(2)
<------------
CBF
<-----
-
TGA2(2)
<---------
AHL20(2)
<-----
->
HVH21
<---------
MYB46(3)
<---------
ANAC46
<------
->
TGA1
<---------
ANAC46
<---------
ANAC58
-------
===
MYC_MYB
<------
MYB83
<----------
DOF2
<--------
===
MYC_MYB
<------
MYB46(1)
<---------
ANAC46
<---------
ANAC58
----------->
GT1
<---------
MYB46(3)
gtccacacat
ggtgggttttagtttattgtggtgtttatgtgtctttgtgtgtttgtttatgtgtgtgtgtgtgagtgagtgaaactcgaagtggtttgg
24170400
<-----------
TGA1
<-----------
HVH21
--------->
TGA2(2)
--------->
ANAC55(2)
--------->
bZIP60(1)
<---------
O2
--------->
O2
<---------
bZIP60(1)
--------->
TGA2(1)
<---------
TGA1a
--------->
TGA1a
===================================
MYC_MYB
<---------
TGA2(1)
--------->
WRKY12
----------->
STF1
--------->
MYB52(1)
<-----------
STF1
------->
GAMYB
<---------
TGA2(2)
<---------
At4g35610
<---------
WOX13(1)
>>>>>>>>>>>
AtbZIP1
<---------
WRKY38(1)
<-----------------
AG
-
MYB83
----------->
TGA1
<---------
At4g35610
--------->
WRKY38(1)
--
-
MYB46(1)
--------->
At4g35610
----------->
RAV1(2)
--------->
DOF5.7(2)
<--
---
AtMYB61
<---------
At4g35610
--------->
At4g35610
<---------
MYB52(1)
<------
ZmHOX2a(1)
-->
MYB59
<------
ZmHOX2a(1)
--------->
YAB1
--------->
At4g35610
<----------
DOF2
--------
-
ANAC46
<------
ZmHOX2a(1)
<-----------
TGA1
<---------
WRKY12
--------->
WRKY45
----------->
GT1
tttctatttaacagaggaaggactgatgctgacgtcattaatcgtcatctgaagtcaactgacttaaccgttgacttcttttgactgactaggaaaaaag
24170500
<-
--
--------->
ANAC46
---------->
DOF2
<-----------
HVH21
--------->
ANAC58
<---------
TOE2(3)
<---------
ANAC58
--------->
ANAC58
-----
--------->
MYB59
<----------
DOF2
--------->
ANAC58
<----
<----------
DOF2
<---------
DAG2
--------->
ANAC46
<---------
------->
GLK1(2)
<---------
ANAC58
<---------
YAB1
--------->
ANAC58
-------
GLK1(2)
<---------
ANAC58
--------->
ANAC46
--------->
ANAC55(1)
-->
DOF2
----------->
TBP
<---------
ANAC58
<---------
CCA1(2)
<---------
MYB52(1)
--------->
AHL20(1)
--
gaatctttaggtataaaaagagttgcctttcgttttcaggtcgcttctatctcactctcacccgttattcttcaaacgacatatattacacgaaattgaa
24170600
<---------
AHL20(2)
<---------
YAB1
--------->
ATHB51
<---------
AHL20(2)
--------->
AHL20(2)
<---------
ICU4
--------->
ICU4
<---------
ICU4
--------->
YAB1
<---------
YAB1
--------
ETT(1)
--------->
ICU4
------->
ANAC46
--------->
YAB1
---->
ARR14(2)
----------->
GT1
--------->
YAB1
-----
ARR14(2)
<---------
YAB1
<---------
TOE2(3)
--------->
AHL20(2)
---
CBF
--------->
ANAC46
--------->
MYB52(2)
<---------
YAB1
<---------
TOE1(3)
--------->
TOE2(3)
--------->
HVH21
----------->
GT1
--------->
YAB1
--------->
MYB59
<---------
YAB1
tccgacatgtattatacgaaggtgaatttggatagttgaacaaaaatgataattattttttcatttaggtttaaaaatgttttcattaaaaatagaacta
24170700
<--
----
------
<-----
<------
<------
ZmHOX2a(1)
<------
--------->
AHL20(2)
-------
--------->
YAB1
<------
<---------
WOX13(1)
<---------
YAB1
----------->
HVH21
--------->
ICU4
<---------
ATHB51
<---------
ZAT6
<---------
TOE2(3)
--------->
WOX13(1)
---------->
DOF2
-------
ctactaaaaacaaaaattcaaatatacttacttatatataggttactgattaatatgctatcaattataaatacagaggaagaaagctagtgacaaataa
24170800
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AGI:
At5g59990.1
Description:
similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G41380.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21746.1); contains InterPro domain CCT (InterPro:IPR010402)
Range:
from: 24168209
to: 24170310
Orientation: Reverse
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.