Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                       <-----------RAV1(2)                                                 <------ZmHOX2a(2)           --------->ICU4                       --------->ARR11(3) --------->YAB1                   <        <---------YAB1                --------->GLK1(2)   <-------TEIL  --------->At4g35610 --------- ---------TOE2(3)                ---------->DOF2<---------ARR11(3)<---------YAB1       --------->TOE2(3)   ttaaggcattctcattatcaagaccgtcgcaattctaaagaatccaattagatcaccaggtacaatttttgataagcagagaaatgctacctcagaaagt  23910500             --------->ARR14(2)             <---------ARR11(3)          --------->YAB1             <---------ARR14(2)          <---------ICU4             --------->ARR11(3)         --------->ICU4           ---------->DOF2     --------->At4g35610                <---------ATHB51   <---------ICU4     <---------At4g35610        <---------ARR14(2)        <---------YAB1              ----------->GT1 --------->ARR14(2)             --------->GLK1(2)       --------->YAB1        --------->DAG2 ---------GLK1(1)              <---------GLK1(1)       <---------ATHB12      ---------->DOF2 ->DOF2      <---------GLK1(2) --------->GLK1(1)     --------->WOX13(1)  <---------ZAT6   cgatttccgctctcagattttctgatcactgggaaatctgaaataatgaagtagtcaatcaaaattgcaaagctagtggaaaaggagatggcaaaacatt  23910600                            <---------ARR14(2)                            --------->ARR14(2)      ------->TEIL                           ===========================HOX2a_HOX2a                           ============================HOX2a_HOX2a                     --------->ATERF1(2)        ------>ZmHOX2a(2)                     <---------ATERF1(2)       --------->CCA1(2)                    <---------LBD16            <------ZmHOX2a(2)                   <---------At5g28300        <---------AGP1                   --------->MYB52(1)         --------->ARR14(2)                  <-----------GT1             <---------ARR14(3)                   --------->At4g35610              <---------AHL20(2)              <---------ARR14(2)           <----------DOF2        ---              --------->AHL20(2)              --------->AGP1  --------->HSFC1(2)<---------At4g35610             <---------AHL20(2)               --------->ARR14(3)    <---------ANAC58              <--             --------->AHL20(2)               --------->ARR11(3)    <---------ANAC58     <----------DOF2      <---------At4g35610  <------ZmHOX2a(1)  <---------ARR11(3)<----------DOF2 --------->At4g35610      --------->At4g35610  --------->ATHB12 ----------->ARR10 <---------HSFC1(2)<---------ZAT2    ---   gaaattggagatgaataaaattaccggcaggattgggaatttcactaagatctggacctgaagaagctttgcttagcctttgagctgctctcttttgacg  23910700                                                                                                  <--                                 <----------ID1                                                   ---                               --------->YAB1                                                     <--                            --------->YAB1                                        <---------RAP2.6(2)                           --------->AHL20(2)         --------->ANAC58           --------->RAP2.6(3)                           <---------AHL20(2)         --------->ANAC58       ---------->DOF2     ----                          --------->AHL20(2)   --------->DEAR3(1)   <---------At4g35610  --------->ARR14(2) ------>GLK1(2)  <------ZmHOX2a(2)         <---------ABI4(2)        --------->At4g35610  <---------ARR14(2) ---------ARR10 <---------ARR11(3)       --------->DAG2           <-----------RAV1(2)---------------- ---->TEIL      --------->ARR11(3)      ---------->DOF2  --------->GLK1(2) --------->ARR11(3)    ----   aatctcttccaactacaagatcacagaaattaataacaacaaaaaagcaccgatgtaagaaactgtcttcagatgaagataaagacggccatatcggaaa  23910800                                                                                                    <                                                                                                    -                                                                                                   <-                                                                                                   --                                                                                                   --                                                                                                  ---                                                                                                  <--          <---------DEAR3(1)                                                                      ---         --------->SPL7                                                                          ----         <---------ZAT14                                                                         <---         --------->ZAT14                                                                         ----     --------->ZAT6         --------->ALFIN1                                               <---------GLK1(1)  ------>ZmHOX2a(1)        ------->MYC3                                                    --------->GLK1(1) --------->TOE2(3)        <---------O2                     --------->ANAC46                *TSS  <--- ---------GT1--------->DEAR3(1)     --------->GLK1(2)     --------->HSFB2a(2)            <------ZmHOX2a(1) ------>ARR11(3)          <---------ANAC46                --------->LBD16        <---------At5g28300- -------ARR11(3)          <---------ANAC58                ------>ZmHOX2a(1)     <-----------GT1 ----- ----->RVE1(1)            <---------ANAC58                <---------LBD16    <----------DOF2    <---- ->AGL1<---------SPL7 --------->CCA1(2)              ------>ZmHOX2a(1)--------->SPL7 --------->ALFIN1 ----->CCA1(1)------>NtERF2<-------MYC3       <---------YAB1  <---------GLK1(2) --------->MYB52(1)<--   tatccttacagtacggcgacctagagacgcgtggtgcgattccatggtatgattcctctcctcggaatttcgaacgtcgatttaacggtgaggaaatcgc  23910900          ----------->GT1  <------NtERF2 ----------->RAV1(1) ------>NtERF2 ---------ETT(2) -------->DEAR3(1) -----NtERF2 ------->RAP2.3(1) ------->ATERF1(1) ------>LBD16 -------ATERF1(1) --->NtERF2                    <----------DOF2 ----->DEAR3(1)    <-----------------AGL3 ------DEAR3(1)<---------AHL20(1) ----->ATERF1(2)   <-----------------AGL2 ------ATERF1(2)<---------CCA1(2) ---------->HVH21--------->ARR11(3)      ----------->GT1 ---->ATERF1(1)<---------ARR11(3)       ----------->GT1                  ----------->HVH21 -----LBD16    --------->ARR11(3)       <---------ZAT6            <-----------GT1 -------RAP2.3(1)<---------ARR11(3)  <------ZmHOX2a(1)       <-----------TBP     ---------->DOF2 <---   cggcgacaaaaatggaatatatctatatttgggcttataggagtgttaaataggcccatggacatatataactctctgaccttgaaagcgagcccagttt  23911000                                                                             xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                   <---------AHL20(2)                                       xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                   --------->AHL20(2)                                       xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                   --------->AHL20(1)             ---------->DOF2          xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                  --------->AHL20(2)            <---------YAB1             xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)          ----------->GT1                     --------->YAB1              xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)          <----------ID1     ---------->DOF2 ----------->GT1              xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)        ---------->DOF2--------->AHL20(2)    <---------YAB1       <---------ETT(1) --------GT1------------------------>ANAC81<------ZmHOX2a(1)   --------->ARR14(2)   ttcaatttcaaaaagaaaaaaaaaattgaataaaagttgaaaacaggatgataaaagaaaaccagtttccgacaaaaaaaaaaaaaaaaaaaaaaaacca  23911100                      ---------->DOF2                    --------->AHL20(2)                    <---------AHL20(2)                  <---------MYB52(1) <---------------------WRI1               --------->ARR11(3)                --------->AHL20(2)    <------ZmHOX2a(1)   <---------               <---------ARR11(3)        --------->KAN4(1)        <---------STY1(2)    --------->DAG2           ---------->DOF2              <---------KAN4(2) --------->MYB46(2)          ---------->DOF2   gtttatgcaattgcaaagacatttaaaagaaaaaaaaacgagaatgttcaaaaaaatcgttaggcgatagctaggagttcgattctaaaaaagttaccaa  23911200                   <------MYB46(1)         <------MYB46(1)         <------MYB83                                                                       <--------       <--------P<--------P                                                                 ---------     <---------MYB46(3)                                                                 --------->ETT(2)     --------->MYB55(2)                                                                 ------>ZmHOX2a(2)     <---------DEAR3(2)                                                              --------->ATHB12    <---------RAP2.6(2)                                                              -------->HAHB4    <---------ANAC46                       <---------ICU4                           --------->ICU4    <---------DEAR3(1)                  --------->YAB1                              <---------YAB1    <---------DREB2C(2)      ---------->DOF2    <---------YAB1                   --------->ICU4  ------------>AtMYB77     <---------YAB1 <---------YAB1      <----------DOF2  --------->TOE2(3) --GT1<-------GAMYB<------MYB83         <---------ICU4  --------------->AtSPL8 --------->YAB1   agtttggcggttggaaacggttggaagttatcaaagcttgaatcatcattttgatttctaagtactttaaacaatgttcagtcttaatgatcgacatctt  23911300               --------->DAG2        <---------ANAC55(2)        --------->ANAC55(2)                                                                         =    <-----------HVH21                             <---------AHL20(2)  <-----------RAV1(1)           < -ARR11(3)    ---------->DOF2              ----------->GT1            <---------YAB1                - >ARR11(3)<---------YAB1         <---------MYB52(1)               <---------GLK1(2)               <--   ctaatatgtcacatgataaagtgtgaaccatacccgtttgatgaagagttatataaacatgttttatagattatgttggcaaaaaaaaaaaaaaaacgtt  23911400  Previous    Next  AGI:  At5g59210.1    Description:  myosin heavy chain-related. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G32240.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21574.1) Range:  from: 23907832    to: 23910891    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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