Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                     --                                --------->ANAC46                                     <------MYB46(1)                        <---------ETT(2)                                             <------MYB83  <- ---->AHL20(2)        --------->At4g35610                                          <---------WOX13(1) -----AHL20(2)   --------->DAG2 --------->ANAC58                                 --------->ATHB12  -- --->YAB1       ---------->DOF2 --------->ANAC58 <-----------ARR10             <---------WOX13(1) ---   taatgccataagacaaaataaagctgttgacaacactcaagctcaatctagtatctaaacaactctttcaaaacatatttgactgattggttttgaccaa  21755700                                   --------->AHL20(1)                                   <---------AHL20(2)                                  --------->AHL20(2)                                  <---------ICU4                                  <---------AHL20(2)              <---------ANAC46    --------->ATHB51            <------MYB83          --------->YAB1            <------MYB46(1)       -------->ATHB1          <---------WOX13(1)      <--------HAHB4        --------->ATHB12         <---------ATHB51      <---------WOX13(1)         --------->ICU4 ------->AHL20(1)             <---------YAB1                                           --------->ATHB12 --------AHL20(2)           <-----------GT1                         <----------DOF2   <---------YAB1 ------->AHL20(2)       --------->ARR11(3)    <----------DOF2 --------->AtMYB61---------->DOF2     -- ------>AHL20(2)        <---------ARR11(3)  xxxxxxxxxxxxxxxx>smallRNA(i)   ---------->DOF2         <-   aaaaattgactgattggtttgtagtagattttacaattattttgaagtctttttttttttaaaaccaaaactttagccaaagaaagttttgattagttca  21755800                                                        <-----------GT1                                                    <---------AHL20(2)                                                <---------CCA1(1)                                                <---------RVE1(1)                                            <---------TOE2(3)                                   <----                                            <---------TOE1(3)                                   <----                                           <-----------GT1                                     <-----                               <---------MYB46(3)   --------->AHL20(2)             ----------->GT1 ------->TOE2(3)              <---------TOE1(2)<---------ARR11(3)         --------->ARR11(3)   ------ ---------DOF2---------->DOF2 <---------TOE2(2)--------->ARR11(3)        <---------CCA1(2)  <------ZmHOX2a(1)   actttagaactctagagaaagcatatttttcgctggtttgttttttaacgatatttttttacttagttttgttttaaatcttgtctagataataggagat  21755900        --------->ARR11(3)        <---------ARR14(2)        <---------ARR11(3)                                      <----------DOF2        --------->ARR14(2)                                     <---------ICU4       <---------CCA1(2)                                     <---------ARR11(3)           --------->TOE2(3)  <---------TOE2(3)          --------->At4g35610             --------->ARR11(3)           --------->TOE1(3)  <---------TOE1(3)          <---------At4g35610            <---------GLK1(2)    <----------DOF2 -----RVE1(1)              <-----------RAV1(2)   ------------>CBF             <---------ARR11(3) -----CCA1(1)     =====================RAV       <-------TEIL--------->GLK1(2)--------->ARR11(3)    - ----ARR11(3)     ----------->RAV1(1)           --------->GLK1(2)            <---------CCA1(2) ------ --->ARR11(3)<---------MYB52(1)  ----------->ARR10    --------->YAB1    ------->TEIL  <-----------GT1   atttaaggtatatctgttagcaacataatccagatgagatttgtggagagattcaataacaagaatctttactgaatctaaatctttttcacccttaacc  21756000                                                                 <----------DOF2                                                                ------>ZmHOX2a(2)                                                               <------ZmHOX2a(2)                   ------>MYB83                                <---------RVE1(1)                   ------>MYB46(1)                            <-----------ARR10              <---------ALFIN1                                <---------ARR14(2)              --------->ANAC46                                <---------ARR11(3)            <---------ALFIN1                                  --------->ARR14(2)            --------->AtMYB61                                 --------->ARR11(3)           --------->ANAC46                         <-----------GT1        <-------TEIL ----------->RAV1(1)            --------->RVE1(1)      <---------GLK1(2)--------->ANAC46   --------->ANAC58    <---------ARR11(1)                <----  ---------->DOF2--------->DEAR3(1)       --------->ANAC58   <---------ARR14(1)                 ----- ---------->TBP  --------->AtMYB61        --------->ANAC46   <---------CCA1(2)                  <---- --->ZAT6<-----------GT1       <----------DOF2  --------->AHL20(2)  ------------>CBF<---------HSFB2a(2)   ctataaaagattcaccacacctcccacaaaactctttatcacacacacaaaaaaatacctctcggatcttttcaatggacgagattgtagaagactcgag  21756100                                             <---------ANAC46                                            --------->ALFIN1                                          <---------ANAC58                                          <---------ANAC46                                          <---------ANAC58                                         <-------TEIL  <-------GAMYB                               ------>ZmHOX2a(2)      <---------MYB46(3)                               ============================HOX2a_HOX2a                             <---------ARR11(3)      <---------AtMYB61                             <---------ARR14(2)<---------ANAC46        --------->HSFB2a(2)   <-------                           <---------YAB1--------->MYB55(2)   ----------->HVH21              --------                         --------->YAB1  <---------MYB46(3) --------->At4g35610         <---------TOE1(2)                        --------->ICU4  --------->ALFIN1--------->ALFIN1  ---------->DOF2  --------->DOF5.7(2) -----ZAT2       =====================HOX2a_HOX2a   <------ZmHOX2a(1)  <---------HSFB2a(2)<---------- ---->ZAT2 --------->CCA1(2) --------->ARR11(3)--------->ALFIN1--------->MYB52(1)    --------->MYB46(3) -----At4g35610  <------ZmHOX2a(1)     <---------MYB52(1)   <---------At4g35610      ------>ZmHOX2a(2)   cagagtcatggagatagaaggacagaatgatgatctggaccggtgcgtggtggaggaggttgagctaaccgttccaaaaaccgatgatccaacgttaccg  21756200                                                                                                 ----                                                                                                 <---                                                                                            <--------                                                                                           ----------                                                                                       <---------MYB52(1)                                                                                       --------->DOF5.7(2)                                                                                      <-------GAMYB                                  <---------ANAC46                                    <---------RAP2.6(3)                                  <---------ANAC58                                   <---------ANAC46                         --------->ARR11(3)                                     --------->At4g35610                       --------->MYB59   --------->YAB1                         <---------At4g35610 --DOF5.7(2)        <----------DOF2   <---------CCA1(2)              <---------------AtSPL8---------- ->MYB52(1)     <---------ZAT18   <---------ANAC58                   --------->HSFB2a(2) <---------DOF5.7(2) -HVH21         --------->ZAT18  <-------TEIL        --------->YAB1  <---------HSFB2a(2)--------->WRKY38(1)   gttctcacatttcgaatgtggactttaggtcttggtgcgtgtatcatactctcgttcataaaccagtttttctggtacagacagatgccgttaaccatta  21756300                                     --------->At4g35610                                     <---------At4g35610                                   <---------WRKY38(1)                                  <<<<<<<<<<WRKY26           <-----------RAV1(2)   <-----------HVH21        --------->At4g35610  <---------O2        <---------At4g35610  --------->O2  --------->GLK1(2)        <---------ALFIN1 <---------GLK1(2)    <---------ANAC58          <---------TOE2(3) --------->ARR14(2)   <---------ANAC58 ----------->HVH21 <---------ARR14(2)   <---------MYB46(3)        <---------TOE1(3)                 ---------->DOF2 ----->At4g35610     --------->ALFIN1<---------ANAC55(2)          <---------HSFB2a(1) ------LBD16        <-----------HVH21--------->ANAC55(2)  =============================HOX2a_HOX2a -------AGL15     <---------RAP2.6(2)----------->RAV1(2)  ------>ZmHOX2a(1)     <------ZmHOX2a(2) ------->AGL1     <---------ANAC58<<<<<<<<<<WRKY43  <-------TEIL  --------->HSFB2a(1) --------->ALFIN1 ------->AGL2     <---------ANAC58<<<<<<<<<<WRKY38 --------->ARR14(2)         <------ZmHOX2a(1)   gcggaatctcggctcagattgcggtcgtgccacttggtcacctgatggctaaggttcttcctacaaggatgttcttggaaggatcaaagtgggagttttc  21756400                                                             --------->At4g35610                                                             --------->ZAT2                                                             <---------ZAT2                       --------->ANAC58                      <---------At4g35610                       --------->ANAC58                  <---------HSFB2a(2)            ------>ZmHOX2a(1)                           <---------LBD16                            --            <----------DOF2        --------->ICU4  <---------------AGL15                      <------  ------->TEIL     <-----------HVH21     <---------YAB1<---------LBD16                        -------   tatgaatccaggtccttttaatgtcaaggaacatgtattgatcacgatttttgctaattcgggagctggaacggtttatgcgactcatatacttagtgca  21756500                   ------>ZmHOX2a(2)                   ==================================HOX2a_HOX2a                  <---------GLK1(1)                           <---------ZAT2 <---------At4g35610                  <------ZmHOX2a(2)                           <---------At4g35610                  --------->GLK1(1)                           --------->At4g35610                  ===================================HOX2a_HOX2a             --------->At4g35610                 <---------ARR11(3)                          <---------TOE2(2)                 --------->ARR11(3)                         <-----------RAV1(2)                --------->GLK1(1)                <---------YAB1      <---------AHL20(2)        <---------YAB1                    <-----------GT1  ------->GAMYB     ----------->RAV1(2) -------->DOF2  <---------GLK1(1)     <----------DOF2--------->YAB1 <---------AHL20(2) ---ZAT18  <---------YAB1       --------->MYB52(1)--------->YAB1    --------->AHL20(2) -->ZAT18--------->YAB1        <-----------GT1------>ZmHOX2a(1)    <---------WOX13(1)        --------   attaagctctattataagagatctcttccatttctaccggcttttctccttatgatcacaacgcaggtgattaattttcatctgccctaatataagcata  21756600  Previous    Next  AGI:  At5g53510.1    Description:  ATOPT9 (oligopeptide transporter 9); oligopeptide transporter. Identical to Probable oligopeptide transporter 9 (OPT9) [Arabidopsis Thaliana] (GB:Q9FJD2); similar to ATOPT7 (oligopeptide transporter 7), oligopeptide transporter [Arabidopsis thaliana] (TAIR:AT4G10770.1); similar to ATOPT8 (oligopeptide transporter 8), oligopeptide transporter [Arabidopsis thaliana] (TAIR:AT5G53520.1); similar to ATOPT6 (oligopeptide transporter 6), oligopeptide transporter [Arabidopsis thaliana] (TAIR:AT4G27730.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48613.1); similar to hypothetical protein OsI_020722 [Oryza sativa (indica cultivar-gro Range:  from: 21756075    to: 21759308    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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