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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
--
--------->
ANAC46
<------
MYB46(1)
<---------
ETT(2)
<------
MYB83
<-
---->
AHL20(2)
--------->
At4g35610
<---------
WOX13(1)
-----
AHL20(2)
--------->
DAG2
--------->
ANAC58
--------->
ATHB12
--
--->
YAB1
---------->
DOF2
--------->
ANAC58
<-----------
ARR10
<---------
WOX13(1)
---
taatgccataagacaaaataaagctgttgacaacactcaagctcaatctagtatctaaacaactctttcaaaacatatttgactgattggttttgaccaa
21755700
--------->
AHL20(1)
<---------
AHL20(2)
--------->
AHL20(2)
<---------
ICU4
<---------
AHL20(2)
<---------
ANAC46
--------->
ATHB51
<------
MYB83
--------->
YAB1
<------
MYB46(1)
-------->
ATHB1
<---------
WOX13(1)
<--------
HAHB4
--------->
ATHB12
<---------
ATHB51
<---------
WOX13(1)
--------->
ICU4
------->
AHL20(1)
<---------
YAB1
--------->
ATHB12
--------
AHL20(2)
<-----------
GT1
<----------
DOF2
<---------
YAB1
------->
AHL20(2)
--------->
ARR11(3)
<----------
DOF2
--------->
AtMYB61
---------->
DOF2
--
------>
AHL20(2)
<---------
ARR11(3)
xxxxxxxxxxxxxxxx>
smallRNA(i)
---------->
DOF2
<-
aaaaattgactgattggtttgtagtagattttacaattattttgaagtctttttttttttaaaaccaaaactttagccaaagaaagttttgattagttca
21755800
<-----------
GT1
<---------
AHL20(2)
<---------
CCA1(1)
<---------
RVE1(1)
<---------
TOE2(3)
<----
<---------
TOE1(3)
<----
<-----------
GT1
<-----
<---------
MYB46(3)
--------->
AHL20(2)
----------->
GT1
------->
TOE2(3)
<---------
TOE1(2)
<---------
ARR11(3)
--------->
ARR11(3)
------
---------
DOF2
---------->
DOF2
<---------
TOE2(2)
--------->
ARR11(3)
<---------
CCA1(2)
<------
ZmHOX2a(1)
actttagaactctagagaaagcatatttttcgctggtttgttttttaacgatatttttttacttagttttgttttaaatcttgtctagataataggagat
21755900
--------->
ARR11(3)
<---------
ARR14(2)
<---------
ARR11(3)
<----------
DOF2
--------->
ARR14(2)
<---------
ICU4
<---------
CCA1(2)
<---------
ARR11(3)
--------->
TOE2(3)
<---------
TOE2(3)
--------->
At4g35610
--------->
ARR11(3)
--------->
TOE1(3)
<---------
TOE1(3)
<---------
At4g35610
<---------
GLK1(2)
<----------
DOF2
-----
RVE1(1)
<-----------
RAV1(2)
------------>
CBF
<---------
ARR11(3)
-----
CCA1(1)
=====================
RAV
<-------
TEIL
--------->
GLK1(2)
--------->
ARR11(3)
-
----
ARR11(3)
----------->
RAV1(1)
--------->
GLK1(2)
<---------
CCA1(2)
------
--->
ARR11(3)
<---------
MYB52(1)
----------->
ARR10
--------->
YAB1
------->
TEIL
<-----------
GT1
atttaaggtatatctgttagcaacataatccagatgagatttgtggagagattcaataacaagaatctttactgaatctaaatctttttcacccttaacc
21756000
<----------
DOF2
------>
ZmHOX2a(2)
<------
ZmHOX2a(2)
------>
MYB83
<---------
RVE1(1)
------>
MYB46(1)
<-----------
ARR10
<---------
ALFIN1
<---------
ARR14(2)
--------->
ANAC46
<---------
ARR11(3)
<---------
ALFIN1
--------->
ARR14(2)
--------->
AtMYB61
--------->
ARR11(3)
--------->
ANAC46
<-----------
GT1
<-------
TEIL
----------->
RAV1(1)
--------->
RVE1(1)
<---------
GLK1(2)
--------->
ANAC46
--------->
ANAC58
<---------
ARR11(1)
<----
---------->
DOF2
--------->
DEAR3(1)
--------->
ANAC58
<---------
ARR14(1)
-----
---------->
TBP
--------->
AtMYB61
--------->
ANAC46
<---------
CCA1(2)
<----
--->
ZAT6
<-----------
GT1
<----------
DOF2
--------->
AHL20(2)
------------>
CBF
<---------
HSFB2a(2)
ctataaaagattcaccacacctcccacaaaactctttatcacacacacaaaaaaatacctctcggatcttttca
atggacgagattgtagaagactcgag
21756100
<---------
ANAC46
--------->
ALFIN1
<---------
ANAC58
<---------
ANAC46
<---------
ANAC58
<-------
TEIL
<-------
GAMYB
------>
ZmHOX2a(2)
<---------
MYB46(3)
============================
HOX2a_HOX2a
<---------
ARR11(3)
<---------
AtMYB61
<---------
ARR14(2)
<---------
ANAC46
--------->
HSFB2a(2)
<-------
<---------
YAB1
--------->
MYB55(2)
----------->
HVH21
--------
--------->
YAB1
<---------
MYB46(3)
--------->
At4g35610
<---------
TOE1(2)
--------->
ICU4
--------->
ALFIN1
--------->
ALFIN1
---------->
DOF2
--------->
DOF5.7(2)
-----
ZAT2
=====================
HOX2a_HOX2a
<------
ZmHOX2a(1)
<---------
HSFB2a(2)
<----------
---->
ZAT2
--------->
CCA1(2)
--------->
ARR11(3)
--------->
ALFIN1
--------->
MYB52(1)
--------->
MYB46(3)
-----
At4g35610
<------
ZmHOX2a(1)
<---------
MYB52(1)
<---------
At4g35610
------>
ZmHOX2a(2)
cagagtcatggagatagaaggacagaatgatgatctggaccggtgcgtggtggaggaggttgagctaaccgttccaaaaaccgatgatccaacgttaccg
21756200
----
<---
<--------
----------
<---------
MYB52(1)
--------->
DOF5.7(2)
<-------
GAMYB
<---------
ANAC46
<---------
RAP2.6(3)
<---------
ANAC58
<---------
ANAC46
--------->
ARR11(3)
--------->
At4g35610
--------->
MYB59
--------->
YAB1
<---------
At4g35610
--
DOF5.7(2)
<----------
DOF2
<---------
CCA1(2)
<---------------
AtSPL8
----------
->
MYB52(1)
<---------
ZAT18
<---------
ANAC58
--------->
HSFB2a(2)
<---------
DOF5.7(2)
-
HVH21
--------->
ZAT18
<-------
TEIL
--------->
YAB1
<---------
HSFB2a(2)
--------->
WRKY38(1)
gttctcacatttcgaatgtggactttaggtcttggtgcgtgtatcatactctcgttcataaaccagtttttctggtacagacagatgccgttaaccatta
21756300
--------->
At4g35610
<---------
At4g35610
<---------
WRKY38(1)
<<<<<<<<<<
WRKY26
<-----------
RAV1(2)
<-----------
HVH21
--------->
At4g35610
<---------
O2
<---------
At4g35610
--------->
O2
--------->
GLK1(2)
<---------
ALFIN1
<---------
GLK1(2)
<---------
ANAC58
<---------
TOE2(3)
--------->
ARR14(2)
<---------
ANAC58
----------->
HVH21
<---------
ARR14(2)
<---------
MYB46(3)
<---------
TOE1(3)
---------->
DOF2
----->
At4g35610
--------->
ALFIN1
<---------
ANAC55(2)
<---------
HSFB2a(1)
------
LBD16
<-----------
HVH21
--------->
ANAC55(2)
=============================
HOX2a_HOX2a
-------
AGL15
<---------
RAP2.6(2)
----------->
RAV1(2)
------>
ZmHOX2a(1)
<------
ZmHOX2a(2)
------->
AGL1
<---------
ANAC58
<<<<<<<<<<
WRKY43
<-------
TEIL
--------->
HSFB2a(1)
--------->
ALFIN1
------->
AGL2
<---------
ANAC58
<<<<<<<<<<
WRKY38
--------->
ARR14(2)
<------
ZmHOX2a(1)
gcggaatctcggctcagattgcggtcgtgccacttggtcacctgatggctaaggttcttcctacaaggatgttcttggaaggatcaaagtgggagttttc
21756400
--------->
At4g35610
--------->
ZAT2
<---------
ZAT2
--------->
ANAC58
<---------
At4g35610
--------->
ANAC58
<---------
HSFB2a(2)
------>
ZmHOX2a(1)
<---------
LBD16
--
<----------
DOF2
--------->
ICU4
<---------------
AGL15
<------
------->
TEIL
<-----------
HVH21
<---------
YAB1
<---------
LBD16
-------
tatgaatccaggtccttttaatgtcaaggaacatgtattgatcacgatttttgctaattcgggagctggaacggtttatgcgactcatatacttagtgca
21756500
------>
ZmHOX2a(2)
==================================
HOX2a_HOX2a
<---------
GLK1(1)
<---------
ZAT2
<---------
At4g35610
<------
ZmHOX2a(2)
<---------
At4g35610
--------->
GLK1(1)
--------->
At4g35610
===================================
HOX2a_HOX2a
--------->
At4g35610
<---------
ARR11(3)
<---------
TOE2(2)
--------->
ARR11(3)
<-----------
RAV1(2)
--------->
GLK1(1)
<---------
YAB1
<---------
AHL20(2)
<---------
YAB1
<-----------
GT1
------->
GAMYB
----------->
RAV1(2)
-------->
DOF2
<---------
GLK1(1)
<----------
DOF2
--------->
YAB1
<---------
AHL20(2)
---
ZAT18
<---------
YAB1
--------->
MYB52(1)
--------->
YAB1
--------->
AHL20(2)
-->
ZAT18
--------->
YAB1
<-----------
GT1
------>
ZmHOX2a(1)
<---------
WOX13(1)
--------
attaagctctattataagagatctcttccatttctaccggcttttctccttatgatcacaacgcag
gtgattaattttcatctgccctaatataagcata
21756600
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AGI:
At5g53510.1
Description:
ATOPT9 (oligopeptide transporter 9); oligopeptide transporter. Identical to Probable oligopeptide transporter 9 (OPT9) [Arabidopsis Thaliana] (GB:Q9FJD2); similar to ATOPT7 (oligopeptide transporter 7), oligopeptide transporter [Arabidopsis thaliana] (TAIR:AT4G10770.1); similar to ATOPT8 (oligopeptide transporter 8), oligopeptide transporter [Arabidopsis thaliana] (TAIR:AT5G53520.1); similar to ATOPT6 (oligopeptide transporter 6), oligopeptide transporter [Arabidopsis thaliana] (TAIR:AT4G27730.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48613.1); similar to hypothetical protein OsI_020722 [Oryza sativa (indica cultivar-gro
Range:
from: 21756075
to: 21759308
Orientation: Forward
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.