Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                 <-----                                                                                             <-------                                                                                            ---------                                                                                            ---------                                                                                        --------->ANAC58                                                      ---------->DOF2                   --------->ANAC58                                             --------->WOX13(1)                        --------->WOX13(1)                                            -------->ATHB1                       <---------------AGL15                                            <---------ICU4                     <------ZmHOX2a(2)                                            --------->YAB1                    <---------ARR11(3) ----                                           <---------ATHB12               --------->YAB1--------->ANAC46                                         --------->WOX13(1)               <-----------GT1   --------- --->GT1                  <------ZmHOX2a(2)--------->ICU4          <---------LBD16   <---------ATHB12   aaatcgcgaaattcaaaactaagaacagatcaaattttcagagcaatcattcaaacaaaagctataaatctcggaatcacgatctaaatcaagcaagtaa  21302100                                               <---------HSFB2a(2)                                               --------->HSFB2a(2)                                              <---------LBD16                                            <---------ARR14(2)                                            --------->ARR14(2)                                            <---------ARR11(3)                                            --------->ARR11(3)                                            --------->GLK1(2)                                        --------->At5g28300                                       --------->LBD16                                      --------->ANAC58                                      --------->ANAC55(2)                                      --------->ANAC55(1)                             --------->At4g35610 ------GT1                            <---------ANAC55(2)                           <---------RAP2.6(2) --MYB52(2)                           --------->ANAC46                  --------->TOE2(2)<---------ZAT14 >ANAC58        --------->At4g35610   --------->ANAC58                  --------->TOE1(2)--------->ZAT14 -->GT1------>ZmHOX2a(2)             <---------LBD16      --------->HSFC1(2)        <---------DEAR3(1) ----->ZAT6  --------->At4g35610   <---------ATHB12       <---------HSFC1(2)       --------->RAP2.6(3) >ANAC58     <---------At4g35610 --------->WOX13(1)  >>>>>>>>>TBF1     ----------->RAV1(2)   caatactgatctatgagcagaagaaaaacacatttcaatcacggaaaatctggaagaagaagcttagtagtttacctgagaagaagacggctgtactcga  21302200                              --------->DOF5.7(2)                            <---------ANAC46                           <------NtERF2                          <---------ERF1                          <---------ATERF1(1)                          ------>NtERF2                          <---------RRTF1(1)                          <---------ORA47(2)                          <---------RAP2.3(1)                          <---------DEAR4(2)                         <---------DEAR3(1)                         <---------ANAC46                         --------->DEAR3(1)                        <---------ABI4(1)                        --------->RAP2.3(1)                      <---------RAP2.3(2)                      <---------RAP2.6(2)                  --------->ATERF1(1)                  <------NtERF2                  <-------GAMYB                 <---------DEAR3(2)                 <---------MYB46(3)                <---------RAP2.6(2)------->GAMYB             <---------DEAR3(1)   --------->ZAT6       ----------->HVH21<------NtERF2       ----------->TGA1<---------ATERF1(1)      <------NtERF2   <---------RRTF1(3)      --------->ATERF1(1)<---------RAP2.3(3)                                               ------>MYB46(1)      --------->At5g28300<---------RAP2.3(2)                                               ------>MYB83     <---------DEAR3(2)<---------RAP2.3(1)                                               --------->DEAR3(1)     <---------ATERF1(1)--------->ATERF1(1)                                              --------->DREB2C(2)     <---------MYB46(3)<---------RRTF1(1)                       ------>ZmHOX2a(1)       --------->DEAR3(2)    <---------DEAR3(1)<---------DEAR3(1)                  --------->HSFB2a(1)      <-------TEIL -----   <------NtERF2<---------ANAC46<---------DOF5.7(2)       <---------HSFB2a(1)    <---------GLK1(2)   <---------ABI4(1) --------->At4g35610             <-----------GT1             <---------ARR14(2) <---------DEAR3(1)  <---------At4g35610        <---------MYB52(1)               --------->ARR14(2)   gactcggcggtgacgatggcggtagcggcggcgttaacagtctcaacgctgttattaacaacgttcctcatctttcgaactcagattcacaccgactaca  21302300                                                ------>ZmHOX2a(2)                                   -                                              --------->ARR14(2)       --------->LBD16             <-                 <---------ANAC58             <---------ARR14(2)     --------->HSFB2a(2)           --                 <---------ANAC58             --------->ARR11(3)     <---------HSFB2a(2)          ---             <---------ANAC58                 <---------ARR11(3)    <---------LBD16               <--         --------->GLK1(1)                    <---------AGP1   <---------GLK1(2)            ---------        <---------GLK1(2)                    <---------CCA1(2) <---------ARR11(3)           <------ZmHOX2a(1)        --------->ARR14(2)             <---------ALFIN1        --------->ARR11(3)          ----------        <---------ARR14(2)          --------->AtMYB61         <---------RVE1(1)            <--------- ---->YAB1   <---------ANAC58      --------->MYB46(3) --------->ANAC46--------->LBD16   ---------->DOF2   ataacatccagatttgcttgcttactactactcagaaaccaccacttggatctactacgcagagagattttcccgagaaaatcaaatgagaaaaggataa  21302400              <----------ID1                <---------ARR14(2)   --------->AHL20(2)               <---------WOX13(1) -------->WOX13(1)                --------->ATHB12 --------AHL20(2)                 <---------ICU4                              --------->DOF5.7(2) ------->AHL20(2)                 -------->HAHB4                              <---------MYB52(1) ------>AHL20(2)                 <---------YAB1                              <-------GAMYB  ========= -------AHL20(2)                 --------->ICU4                             --------->MYB52(2)     -- -->GT1    --------->DAG2      --------->YAB1                               <---------MYB46(3)   *TSS ->GT1    ---------->DOF2 ----------->GT1------>ZmHOX2a(2)                <---------MYB52(1)<-------- -ID1  --------->AHL20(2) <---------ANAC46  --------->ARR14(2)       <---------ALFIN1      <---------GLK1(2)   ataaatcaaataaaaagcgaagaaggttttgtataatgatggatcgaattctctctctctctctctcactcacaccggtcgttatctagtccagcttttc  21302500                          --------->TGA2(2)                         <-----------TGA1                         <-----------HVH21                        ==========================================bZIP_DOF <-------MYC3                        <---------O2                                       ------->MYC2                        --------->O2                                       ------->MYC3                        <---------ANAC55(2)                                <-------MYC2                        <---------TGA1a                                   --------->ANAC58                        --------->ANAC55(2)                               --------->ANAC58                        --------->ANAC58                                  --------->ANAC46                        --------->TGA1a                              --------->ANAC46                        --------->ANAC58                           --------->AtMYB61                        --------->ANAC46                           <---------ALFIN1                        <---------bZIP60(1)                       --------->MYB46(3)                       <-----------STF1                         --------->ANAC58                <----------DOF2                                 --------->ANAC46    <---------------AGL15            <-------PIF5--------->bZIP60(2)            <----------DOF2  <---------ALFIN1      <-----------GT1  <-----------bZIP910(1)         <---------ANAC58<---------ALFIN1--------->AHL20(2) =================================bZIP_DOF            <---------ANAC58--------->AtMYB61 ---------->CBF ==================bZIP_DOF<---------MYB46(3)    --------->ANAC58    --------------->AGL15 --DOF2     ------->PIF5--------->bZIP60(1)  <-------TEIL   <-----------HVH21  <----------DOF2   attcaatttcaccacgagcttttgccacgtcatcacattttagatggttcatggttcctttccttcacaccaccacacgcgcttcacttaaaatagttat  21302600                                   <------MYB83                    <------------MYB.PH3(1)                  --------->MYB52(1)                <---------MYB52(2) <------MYB46(1)            --------->At5g28300   <---------AtMYB61                 <-----------GT1           ----------->GT1      <---------MYB52(1)         <-------TEIL               <--------------          ----------->GT1    ------>ZmHOX2a(2)           <---------ARR14(2)     ----------->GT1  ---- --------->ATHB12 <-----------GT1 --------->MYB59        --------->ARR14(2) <-------TEIL    ---------   gcatcatttgggagggtaaataacggtttgatcggtttggttcaatccctagaaatgcagattcaatttttatctacatacatagttactaaaacttgtt  21302700                 <---------ANAC58           <---------AHL20(2)                                                     ----------->GT1           --------->AHL20(1)                                                    ----------->GT1           --------->AHL20(2)                                             <----------ID1   <---------HSFC1(1)           <---------AHL20(1)                                           ---------->DOF2    <---------HSFB2a(2)           <---------ARR11(3)                                        --------->HSFB2a(2)--------->ARR11(3)    --------->GLK1(2)                         <---------ANAC46       <---------HSFB2a(2)<---------ARR11(3) -AGL15    --------->ARR11(3)<---------AHL20(2)                     ----------------->AGL1 --------->HSFB2a(2) ------>DOF2     <---------ANAC58       --------->ZAT14       ---------->DOF2  --------->DAG2 <<<<<<<ZML2 ------>AGL15   <---------MYB46(3)      <---------ZAT14     <---------ATHB12  ---------->DOF2 <------   aaagaaattctaatatattggttgtgaacatatatttgtctctgcattgtgggttttctcaaatcaaagttccaaaaagaaaaagggtaatatctagaac  21302800                                                                                     <---------ICU4                                                                                     -------->HAHB4                                                                                     --------->ATHB12                                                                                     <---------AHL20(2)                                                                                     -------->ATHB1                                                                                     --------->ATHB51                                                                                    <---------ATHB51                                                                                    --------->ICU4                                                                                    <---------YAB1                                        <---------TOE2(3)                         <--------HAHB4   <---------AHL20(2)                   <---------TOE1(3)                         <---------ICU4  <---------AHL20(1)                   --------->MYB52(1)                         --------->YAB1  --------->AHL20(2)        --------->YAB1                               <---------YAB1  <---------AHL20(2)        <---------ANAC46--------->WRKY12   <------MYB83      --------->ICU4 ---ARR11(3)                ----------->GT1 --------->WRKY38(1)<------MYB46(1)   --------->AHL20(2)   ttaattttttttggtatatatagactagtatcgtaaaatactaacgttggccaatgtctatatgtaggtgttttttttatagaataattattggtcttca  21302900                                                                                      <--------------                                                                                    <---------MYB52(1)                                                 <---------ARR11(3)                <----------DOF2                                                 --------->ARR11(3)     >>>>>>>>>>WRKY6                                                 --------->AHL20(1)     >>>>>>>>>>WRKY11            -                                                 <---------AHL20(1)    --------->WRKY45          <---         <---------AHL20(2)                      --------->AHL20(2)    --------->WRKY12    --------->ANAC58        --------->AHL20(2)            ---------->DOF2                  --------->WRKY38(1) --------->ANAC58  ------->TEIL                   ---------->DOF2 <---------AHL20(2)    ----------->HVH21  ------->TEIL   aatgtacctataaaatggatgattctatacttgttcaaaggaaagaagaaatatattagaccatggggaagagttgacccatagcctttatgtacgcata  21303000  Previous    Next  AGI:  At5g52430.1    Description:  hydroxyproline-rich glycoprotein family protein. similar to hydroxyproline-rich glycoprotein family protein [Arabidopsis thaliana] (TAIR:AT4G25620.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO49451.1) Range:  from: 21299976    to: 21302497    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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