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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
<-----
<-------
---------
---------
--------->
ANAC58
---------->
DOF2
--------->
ANAC58
--------->
WOX13(1)
--------->
WOX13(1)
-------->
ATHB1
<---------------
AGL15
<---------
ICU4
<------
ZmHOX2a(2)
--------->
YAB1
<---------
ARR11(3)
----
<---------
ATHB12
--------->
YAB1
--------->
ANAC46
--------->
WOX13(1)
<-----------
GT1
---------
--->
GT1
<------
ZmHOX2a(2)
--------->
ICU4
<---------
LBD16
<---------
ATHB12
aaatcgcgaaattcaaaactaagaacagatcaaattttcagagcaatcattcaaacaaaagctataaatctcggaatcacgatctaaatcaagcaagtaa
21302100
<---------
HSFB2a(2)
--------->
HSFB2a(2)
<---------
LBD16
<---------
ARR14(2)
--------->
ARR14(2)
<---------
ARR11(3)
--------->
ARR11(3)
--------->
GLK1(2)
--------->
At5g28300
--------->
LBD16
--------->
ANAC58
--------->
ANAC55(2)
--------->
ANAC55(1)
--------->
At4g35610
------
GT1
<---------
ANAC55(2)
<---------
RAP2.6(2)
--
MYB52(2)
--------->
ANAC46
--------->
TOE2(2)
<---------
ZAT14
>
ANAC58
--------->
At4g35610
--------->
ANAC58
--------->
TOE1(2)
--------->
ZAT14
-->
GT1
------>
ZmHOX2a(2)
<---------
LBD16
--------->
HSFC1(2)
<---------
DEAR3(1)
----->
ZAT6
--------->
At4g35610
<---------
ATHB12
<---------
HSFC1(2)
--------->
RAP2.6(3)
>
ANAC58
<---------
At4g35610
--------->
WOX13(1)
>>>>>>>>>
TBF1
----------->
RAV1(2)
caatactgatctatgagcagaagaaaaacacatttcaatcacggaaaatctggaagaagaagcttagtagtttac
ctgagaagaagacggctgtactcga
21302200
--------->
DOF5.7(2)
<---------
ANAC46
<------
NtERF2
<---------
ERF1
<---------
ATERF1(1)
------>
NtERF2
<---------
RRTF1(1)
<---------
ORA47(2)
<---------
RAP2.3(1)
<---------
DEAR4(2)
<---------
DEAR3(1)
<---------
ANAC46
--------->
DEAR3(1)
<---------
ABI4(1)
--------->
RAP2.3(1)
<---------
RAP2.3(2)
<---------
RAP2.6(2)
--------->
ATERF1(1)
<------
NtERF2
<-------
GAMYB
<---------
DEAR3(2)
<---------
MYB46(3)
<---------
RAP2.6(2)
------->
GAMYB
<---------
DEAR3(1)
--------->
ZAT6
----------->
HVH21
<------
NtERF2
----------->
TGA1
<---------
ATERF1(1)
<------
NtERF2
<---------
RRTF1(3)
--------->
ATERF1(1)
<---------
RAP2.3(3)
------>
MYB46(1)
--------->
At5g28300
<---------
RAP2.3(2)
------>
MYB83
<---------
DEAR3(2)
<---------
RAP2.3(1)
--------->
DEAR3(1)
<---------
ATERF1(1)
--------->
ATERF1(1)
--------->
DREB2C(2)
<---------
MYB46(3)
<---------
RRTF1(1)
------>
ZmHOX2a(1)
--------->
DEAR3(2)
<---------
DEAR3(1)
<---------
DEAR3(1)
--------->
HSFB2a(1)
<-------
TEIL
-----
<------
NtERF2
<---------
ANAC46
<---------
DOF5.7(2)
<---------
HSFB2a(1)
<---------
GLK1(2)
<---------
ABI4(1)
--------->
At4g35610
<-----------
GT1
<---------
ARR14(2)
<---------
DEAR3(1)
<---------
At4g35610
<---------
MYB52(1)
--------->
ARR14(2)
gactcggcggtgacgatggcggtagcggcggcgttaacagtctcaacgctgttattaacaacgttcctcat
ctttcgaactcagattcacaccgactaca
21302300
------>
ZmHOX2a(2)
-
--------->
ARR14(2)
--------->
LBD16
<-
<---------
ANAC58
<---------
ARR14(2)
--------->
HSFB2a(2)
--
<---------
ANAC58
--------->
ARR11(3)
<---------
HSFB2a(2)
---
<---------
ANAC58
<---------
ARR11(3)
<---------
LBD16
<--
--------->
GLK1(1)
<---------
AGP1
<---------
GLK1(2)
---------
<---------
GLK1(2)
<---------
CCA1(2)
<---------
ARR11(3)
<------
ZmHOX2a(1)
--------->
ARR14(2)
<---------
ALFIN1
--------->
ARR11(3)
----------
<---------
ARR14(2)
--------->
AtMYB61
<---------
RVE1(1)
<---------
---->
YAB1
<---------
ANAC58
--------->
MYB46(3)
--------->
ANAC46
--------->
LBD16
---------->
DOF2
ataacatccagatttgcttgcttactactactcagaaaccaccacttggatctactacgcagagagattttcccgagaaaatcaaatgagaaaaggataa
21302400
<----------
ID1
<---------
ARR14(2)
--------->
AHL20(2)
<---------
WOX13(1)
-------->
WOX13(1)
--------->
ATHB12
--------
AHL20(2)
<---------
ICU4
--------->
DOF5.7(2)
------->
AHL20(2)
-------->
HAHB4
<---------
MYB52(1)
------>
AHL20(2)
<---------
YAB1
<-------
GAMYB
=========
-------
AHL20(2)
--------->
ICU4
--------->
MYB52(2)
--
-->
GT1
--------->
DAG2
--------->
YAB1
<---------
MYB46(3)
*
TSS
->
GT1
---------->
DOF2
----------->
GT1
------>
ZmHOX2a(2)
<---------
MYB52(1)
<--------
-
ID1
--------->
AHL20(2)
<---------
ANAC46
--------->
ARR14(2)
<---------
ALFIN1
<---------
GLK1(2)
ataaatcaaataaaaagcgaagaaggttttgtataatgatggatcgaattctctctctctctctctcactcacaccggtcgttatctagtccagctt
ttc
21302500
--------->
TGA2(2)
<-----------
TGA1
<-----------
HVH21
==========================================
bZIP_DOF
<-------
MYC3
<---------
O2
------->
MYC2
--------->
O2
------->
MYC3
<---------
ANAC55(2)
<-------
MYC2
<---------
TGA1a
--------->
ANAC58
--------->
ANAC55(2)
--------->
ANAC58
--------->
ANAC58
--------->
ANAC46
--------->
TGA1a
--------->
ANAC46
--------->
ANAC58
--------->
AtMYB61
--------->
ANAC46
<---------
ALFIN1
<---------
bZIP60(1)
--------->
MYB46(3)
<-----------
STF1
--------->
ANAC58
<----------
DOF2
--------->
ANAC46
<---------------
AGL15
<-------
PIF5
--------->
bZIP60(2)
<----------
DOF2
<---------
ALFIN1
<-----------
GT1
<-----------
bZIP910(1)
<---------
ANAC58
<---------
ALFIN1
--------->
AHL20(2)
=================================
bZIP_DOF
<---------
ANAC58
--------->
AtMYB61
---------->
CBF
==================
bZIP_DOF
<---------
MYB46(3)
--------->
ANAC58
--------------->
AGL15
--
DOF2
------->
PIF5
--------->
bZIP60(1)
<-------
TEIL
<-----------
HVH21
<----------
DOF2
attcaatttcaccacgagcttttgccacgtcatcacattttagatggttcatggttcctttccttcacaccaccacacgcgcttcacttaaaatagttat
21302600
<------
MYB83
<------------
MYB.PH3(1)
--------->
MYB52(1)
<---------
MYB52(2)
<------
MYB46(1)
--------->
At5g28300
<---------
AtMYB61
<-----------
GT1
----------->
GT1
<---------
MYB52(1)
<-------
TEIL
<--------------
----------->
GT1
------>
ZmHOX2a(2)
<---------
ARR14(2)
----------->
GT1
----
--------->
ATHB12
<-----------
GT1
--------->
MYB59
--------->
ARR14(2)
<-------
TEIL
---------
gcatcatttgggagggtaaataacggtttgatcggtttggttcaatccctagaaatgcagattcaatttttatctacatacatagttactaaaacttgtt
21302700
<---------
ANAC58
<---------
AHL20(2)
----------->
GT1
--------->
AHL20(1)
----------->
GT1
--------->
AHL20(2)
<----------
ID1
<---------
HSFC1(1)
<---------
AHL20(1)
---------->
DOF2
<---------
HSFB2a(2)
<---------
ARR11(3)
--------->
HSFB2a(2)
--------->
ARR11(3)
--------->
GLK1(2)
<---------
ANAC46
<---------
HSFB2a(2)
<---------
ARR11(3)
-
AGL15
--------->
ARR11(3)
<---------
AHL20(2)
----------------->
AGL1
--------->
HSFB2a(2)
------>
DOF2
<---------
ANAC58
--------->
ZAT14
---------->
DOF2
--------->
DAG2
<<<<<<<
ZML2
------>
AGL15
<---------
MYB46(3)
<---------
ZAT14
<---------
ATHB12
---------->
DOF2
<------
aaagaaattctaatatattggttgtgaacatatatttgtctctgcattgtgggttttctcaaatcaaagttccaaaaagaaaaagggtaatatctagaac
21302800
<---------
ICU4
-------->
HAHB4
--------->
ATHB12
<---------
AHL20(2)
-------->
ATHB1
--------->
ATHB51
<---------
ATHB51
--------->
ICU4
<---------
YAB1
<---------
TOE2(3)
<--------
HAHB4
<---------
AHL20(2)
<---------
TOE1(3)
<---------
ICU4
<---------
AHL20(1)
--------->
MYB52(1)
--------->
YAB1
--------->
AHL20(2)
--------->
YAB1
<---------
YAB1
<---------
AHL20(2)
<---------
ANAC46
--------->
WRKY12
<------
MYB83
--------->
ICU4
---
ARR11(3)
----------->
GT1
--------->
WRKY38(1)
<------
MYB46(1)
--------->
AHL20(2)
ttaattttttttggtatatatagactagtatcgtaaaatactaacgttggccaatgtctatatgtaggtgttttttttatagaataattattggtcttca
21302900
<--------------
<---------
MYB52(1)
<---------
ARR11(3)
<----------
DOF2
--------->
ARR11(3)
>>>>>>>>>>
WRKY6
--------->
AHL20(1)
>>>>>>>>>>
WRKY11
-
<---------
AHL20(1)
--------->
WRKY45
<---
<---------
AHL20(2)
--------->
AHL20(2)
--------->
WRKY12
--------->
ANAC58
--------->
AHL20(2)
---------->
DOF2
--------->
WRKY38(1)
--------->
ANAC58
------->
TEIL
---------->
DOF2
<---------
AHL20(2)
----------->
HVH21
------->
TEIL
aatgtacctataaaatggatgattctatacttgttcaaaggaaagaagaaatatattagaccatggggaagagttgacccatagcctttatgtacgcata
21303000
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AGI:
At5g52430.1
Description:
hydroxyproline-rich glycoprotein family protein. similar to hydroxyproline-rich glycoprotein family protein [Arabidopsis thaliana] (TAIR:AT4G25620.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO49451.1)
Range:
from: 21299976
to: 21302497
Orientation: Reverse
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.