Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                      -                                                                           ------>ZmHOX2a(1)        -                                                                          --------->TOE2(3) <--------                                                                 =================HOX2a_HOX2a  <-----                                    <---------At4g35610          <------ZmHOX2a(2)       <-----------GT1                     --------->ARR11(3)                         --------->ARR14(2)    <---------ARR14(2)                     --------->GLK1(2)                          --------->AGP1        --------->ARR14(2)                     <---------ARR11(3)               <-------TEIL <---------ALFIN1 --------->LBD16 -                    <---------GLK1(2)        <---------ATHB12   <---------ARR14(2)<---------LBD16   <       <---------At4g35610          --------->At4g35610         --------->ARR11(3)--------->At4g35610       --------->At4g35610   ------>ZmHOX2a(2) <----------DOF2  <---------ARR11(3)<---------At4g35610   tgcttaatcaactgcttcttcaaaatctcgatctcttcagcagtccaatctttagtttcattcacagatccactctccttagactgcggaatcaccactt  18423400                                                                                                    <                                     <---------GLK1(2)                                    --------->ARR14(2)              <---------At5g28300   <------NtERF2                                      ------>ZmHOX2a(1)             <---------WRKY38(1) <---------LBD16                                       --------->LBD16     --------->HSFC1(2)        <---------RAP2.3(2)                                   ----------->RAV1(2) --------->ANAC46--------->ZAT14--------->LBD16                                <---------GLK1(1)   <- -------->LBD16 --------->DEAR3(1)<---------ANAC46                             --------->GLK1(1)   -- -------->HSFB2a(2)            <---------RAP2.6(2)               =============================HOX2a_HOX2a -ALFIN1--------->ZAT14        <---------LBD16                   ==========================HOX2a_HOX2a -----DOF2 <-----------HVH21  <---------LBD16             <----------DOF2 <---------At5g28300     <-- ----->ZmHOX2a(1)--------->LBD16------>NtERF2          ------->TEIL      <-----------GT1  <---------ARR14(2) ---------HSFB2a(2) --------->At4g35610      <----------DOF2     ------>ZmHOX2a(2)  ------>ZmHOX2a(1)   tcctcgaaacttcagtcaccgcagaagcattttccggcggattatcgctcttcgtcgaacctttagatcgcttattcaccgatttcctcctggattcacg  18423500                                                        ------->GAMYB                                                        ----------->HVH21                                                        --------->DEAR3(1)                                                       --------->MYB46(3)                                                       --------->DEAR3(2)                                                     <---------ARR14(2)                                                     --------->ARR14(2)                                                     --------->MYB52(1)                                              ----------->HVH21                                             ------>ZmHOX2a(2)                                            --------->CCA1(2)                                            --------->At4g35610             <---------MYB52(1)       <---------LBD16                      <------ZmHOX2a(2)              --------->LBD16       --------->LBD16                     <---------ARR14(2)   ------->TEIL<-----------HVH21      <---------ANAC46                     <---------ARR11(3)   --------->GLK1(2)      <---------ANAC58                     --------->ARR14(2)   <---------ARR11(1)            -------      <---------ANAC58                     <---------ARR14(3)   <-----------ARR10   <---------STY1(2) <---------MYB52(1)      --------->ARR14(2)--------->ARR14(3)   --------->ARR14(2)  --------->STY1(2) -------GAMYB            <---------ARR14(2)<-----------ARR10    <---------ARR14(2)  --------->ZAT2 --------MYB46(3)        --------->GLK1(2) --------->AGP1      <---------CCA1(2)    <---------ZAT2  - ------->MYB52(2)        ------->TEIL      <---------AGP1   ------>NtERF2<---------LBD16 <------ZmHOX2a(1) -----TEIL              <---------CCA1(2)  --------->ARR11(3)  <---------ARR14(1) --------->ZAT18 <--   ttcgttatccgtggatgactcatcgtgaatctgttctggctccaagatctgaccataaccgacgcgaatcttacctccggtgagcgagctaggagcgaaa  18423600                                                      <-------TEIL                                                    --------->ARR14(2)                                                    <---------GLK1(2)        <------ZmHOX2a(1)  --------->YAB1           <---------ARR14(2) --------->DEAR3(1)  --------->ANAC58             ----------->ARR10 ----------->HVH21   --------->ANAC58           <-------TEIL --->DOF2---------->DOF2  <---------YAB1     <------MYB83                         <---------YAB1 -------->DEAR3(2)  --------->GLK1(1)        <------MYB46(1)              ----------->GT1 ----ZmHOX2a(1)    ---------->DOF2          <---------TOE1(2)        <------ZmHOX2a(1)   ggaccgacgaggaaagagagggaaagccataatagtagcgatttggcaggttcagattcgaagtagaagaaggagagagataatatgatgagggagattg  18423700                                                       <---------TGA1a                                                       --------->TGA1a                                                       <---------O2                                                       <---------ANAC46                                                       <---------ANAC58                                                     ------>NtERF2>>>>>>>>>TBF1                                                    --------->DEAR3(1)                                                    --------->ANAC46                      <---------ARR14(2)                                            <<<<<<<<<TBF1--------->ALFIN1                 <----------                   <---------ANAC58      <<<<<<<<<TBF1 <---------ANAC58                   --------->ARR14(2)                   <---------ANAC58 <---------GLK1(2)--------->LBD16    <------ZmHOX2a(1) --------->GLK1(2)               ---------->DOF2--------->GLK1(2)   ------>ZmHOX2a(1)    <----------ID1     ------->TEIL               ==================================================bZIP_DOF                <---------ARR14(1)   agacggagattgaaatgaaaagcttgttagggattctagcttcttcttcttcctccgccgtgtgagaagaagaaggacgagattggaaaacgaatctagg  18423800                                               <---------At4g35610                                      --------->ZAT14                                 --------->ZAT18          --------->AHL20(2)   --------->ARR11(3)                                 *TSS <---------ZAT14    --------->AHL20(2)    <---------ARR11(3)                              <-------GAMYB    --------->At4g35610            --------->RVE1(1)                             <-----------RAV1(1)     ------------>CBF         --------->CCA1(1) -ARR10              <-----------RAV1(1)      --------->GLK1(2)             --------->AHL20(2)   cctgtcttcgtcgaaaaaatccattgttgctctgttgcactgtagaagaagctgaaacaataaataaaacttagaaaaaaaaatctcagaaataagtgtt  18423900                                                                                              <------                          --------->ARR11(3)                                                  -------                          <---------ARR11(3)                        --------->At4g35610       <------                  --------->ARR14(2)                           <-----------GT1               --------                  <---------ARR14(2)                <---------AHL20(1)                       <-------              <-------TEIL<---------GLK1(2)         --------->AHL20(1)                      ---------         ---------->DOF2----------->ARR10---------->DOF2 --------->AHL20(2)               ------->TEIL    <----------DOF2  --------->ANAC46 ----------->GT1    <---------AHL20(2)     ----------->GT1    --   tttgggcttttgaaagtccatatacgaagatttttgggtattgtaaagcccatatatattaaaatttagcatatgacaaaattggttatacgaattttaa  18424000                                  --------->AHL20(1)                                  <---------AHL20(1)             ==========================HOX2a_HOX2a                                  <---------AHL20(2)             <------ZmHOX2a(2)                                  --------->AHL20(2)   <---------ZAT18                             --------->AHL20(1)        --------->ZAT18  <---------AHL20(2)         --------->AHL20(2)        --------->ZAT14 ---YAB1                     <---------AHL20(2)   <---------ANAC46 -->AHL20(2)            <---------MYB52(1)        <---------ANAC58------>ZmHOX2a(2) ---AHL20(2)           --------->TOE2(3)      ---------->DOF2   <---------ARR11(3)  <------ZmHOX2a(1) ->AHL20(2)            --------->TOE1(3)   <---------ZAT6 --------->ANAC46 <---------ZAT6 --AHL20(2)    --------->ANAC58  <---------AHL20(2)    <---------ZAT14 <---------ARR14(2) >YAB1     <---------ZAT6    <---------AHL20(1)   <---------ANAC58=========================HOX2a_HOX2a --------->GT1 --------->ANAC58  --------->AHL20(2)  --------->REM1(2) --------->ARR14(2)   ttagttaattttagagtaagcaaacccttaattaattaaattttagtggaaagcgtgtacactcgagatcgcagatagagatagtaggactcagagaaga  18424100                                                                        --------->ANAC46                                                                        --------->ANAC58                                                                        --------->ANAC58                                                                       --------->SPL7                                                                   --------------->AtSPL8                                                                   <---------------AtSPL3                                                                   <---------------AtSPL8                                                               ------->MYC3                        <-                                                               <-------MYC3                        --                                                              =======================================          --------->YAB1                 --------->ANAC58     --------->TGA1a                     ---          <---------ICU4================================================bZIP_DOF          <---------TOE2(3)         <---------ATHB12          --------->MYB46(3)         <---------TGA1a            <-----------GT1       --------->YAB1   <----------DOF2  --------->ANAC58    <---------TOE1(2) <---------AHL20(2)<---   ttgtgccactaatcatgctcttgagcctttctgttcaacaacgaagcaattgcagagaaatcacacgtttgtgtacgacattttttttttttaacgtcga  18424200                                        <---------AHL20(1)       --------->MYB52(2)               --------->ARR11(3)     <---------MYB52(1)                 --------->AHL20(1)     <--------P                     --------->YAB1                                               <---   <---------MYB46(3)              ----------->GT1                                               <--- --------AHL20(2)               <---------AHL20(2)                                               ---- ------->ATHB12             --------->YAB1                                       --------->DAG2 <---- =======bZIP_DOF           <---------AHL20(2)      ----------->GT1              ---------->DOF2 ----- ------>AHL20(2)           <---------YAB1  <---------YAB1  ----------->GT1 ----------->GT1      <---- -------DOF2 <---------AHL20(2)--------->AHL20(2)<---------LBD16      <------ZmHOX2a(1) ----------->GT1   tttattggttagttttatattgcaactatattataaaatgaaaatattgttgacggaaaaatggaaattttaggagccagaaaaaagggaaggaaacaat  18424300  Previous    Next  AGI:  At5g45420.1    Description:  myb family transcription factor. similar to DNAJ heat shock N-terminal domain-containing protein / cell division protein-related [Arabidopsis thaliana] (TAIR:AT3G11450.1); similar to hypothetical protein OsI_026897 [Oryza sativa (indica cultivar-group)] (GB:EAZ05665.1); contains InterPro domain Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609); contains InterPro domain SANT, DNA-binding; (InterPro:IPR001005); contains InterPro domain Homeodomain-like (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding (InterPro:IPR014778) Range:  from: 18421296    to: 18423833    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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