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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
-
------>
ZmHOX2a(1)
-
--------->
TOE2(3)
<--------
=================
HOX2a_HOX2a
<-----
<---------
At4g35610
<------
ZmHOX2a(2)
<-----------
GT1
--------->
ARR11(3)
--------->
ARR14(2)
<---------
ARR14(2)
--------->
GLK1(2)
--------->
AGP1
--------->
ARR14(2)
<---------
ARR11(3)
<-------
TEIL
<---------
ALFIN1
--------->
LBD16
-
<---------
GLK1(2)
<---------
ATHB12
<---------
ARR14(2)
<---------
LBD16
<
<---------
At4g35610
--------->
At4g35610
--------->
ARR11(3)
--------->
At4g35610
--------->
At4g35610
------>
ZmHOX2a(2)
<----------
DOF2
<---------
ARR11(3)
<---------
At4g35610
tgcttaatcaactgcttcttcaaaatctcgatctcttcagcagtccaatctttagtttcattcacagatccactctccttagactgcggaatcaccactt
18423400
<
<---------
GLK1(2)
--------->
ARR14(2)
<---------
At5g28300
<------
NtERF2
------>
ZmHOX2a(1)
<---------
WRKY38(1)
<---------
LBD16
--------->
LBD16
--------->
HSFC1(2)
<---------
RAP2.3(2)
----------->
RAV1(2)
--------->
ANAC46
--------->
ZAT14
--------->
LBD16
<---------
GLK1(1)
<-
-------->
LBD16
--------->
DEAR3(1)
<---------
ANAC46
--------->
GLK1(1)
--
-------->
HSFB2a(2)
<---------
RAP2.6(2)
=============================
HOX2a_HOX2a
-
ALFIN1
--------->
ZAT14
<---------
LBD16
==========================
HOX2a_HOX2a
-----
DOF2
<-----------
HVH21
<---------
LBD16
<----------
DOF2
<---------
At5g28300
<--
----->
ZmHOX2a(1)
--------->
LBD16
------>
NtERF2
------->
TEIL
<-----------
GT1
<---------
ARR14(2)
---------
HSFB2a(2)
--------->
At4g35610
<----------
DOF2
------>
ZmHOX2a(2)
------>
ZmHOX2a(1)
tcctcgaaacttcagtcaccgcagaagcattttccggcggattatcgctcttcgtcgaacctttagatcgcttattcaccgatttcctcctggattcacg
18423500
------->
GAMYB
----------->
HVH21
--------->
DEAR3(1)
--------->
MYB46(3)
--------->
DEAR3(2)
<---------
ARR14(2)
--------->
ARR14(2)
--------->
MYB52(1)
----------->
HVH21
------>
ZmHOX2a(2)
--------->
CCA1(2)
--------->
At4g35610
<---------
MYB52(1)
<---------
LBD16
<------
ZmHOX2a(2)
--------->
LBD16
--------->
LBD16
<---------
ARR14(2)
------->
TEIL
<-----------
HVH21
<---------
ANAC46
<---------
ARR11(3)
--------->
GLK1(2)
<---------
ANAC58
--------->
ARR14(2)
<---------
ARR11(1)
-------
<---------
ANAC58
<---------
ARR14(3)
<-----------
ARR10
<---------
STY1(2)
<---------
MYB52(1)
--------->
ARR14(2)
--------->
ARR14(3)
--------->
ARR14(2)
--------->
STY1(2)
-------
GAMYB
<---------
ARR14(2)
<-----------
ARR10
<---------
ARR14(2)
--------->
ZAT2
--------
MYB46(3)
--------->
GLK1(2)
--------->
AGP1
<---------
CCA1(2)
<---------
ZAT2
-
------->
MYB52(2)
------->
TEIL
<---------
AGP1
------>
NtERF2
<---------
LBD16
<------
ZmHOX2a(1)
-----
TEIL
<---------
CCA1(2)
--------->
ARR11(3)
<---------
ARR14(1)
--------->
ZAT18
<--
ttcgttatccgtggatgactcatcgtgaatctgttctggctccaagatctgaccataaccgacgcgaatcttacctccggtgagcgagctaggagcgaaa
18423600
<-------
TEIL
--------->
ARR14(2)
<---------
GLK1(2)
<------
ZmHOX2a(1)
--------->
YAB1
<---------
ARR14(2)
--------->
DEAR3(1)
--------->
ANAC58
----------->
ARR10
----------->
HVH21
--------->
ANAC58
<-------
TEIL
--->
DOF2
---------->
DOF2
<---------
YAB1
<------
MYB83
<---------
YAB1
-------->
DEAR3(2)
--------->
GLK1(1)
<------
MYB46(1)
----------->
GT1
----
ZmHOX2a(1)
---------->
DOF2
<---------
TOE1(2)
<------
ZmHOX2a(1)
ggaccgacgaggaaagagagggaaagccataatagtagcgatttggcaggttcagattcgaagtagaagaaggagagagataatatgatgagggagattg
18423700
<---------
TGA1a
--------->
TGA1a
<---------
O2
<---------
ANAC46
<---------
ANAC58
------>
NtERF2
>>>>>>>>>
TBF1
--------->
DEAR3(1)
--------->
ANAC46
<---------
ARR14(2)
<<<<<<<<<
TBF1
--------->
ALFIN1
<----------
<---------
ANAC58
<<<<<<<<<
TBF1
<---------
ANAC58
--------->
ARR14(2)
<---------
ANAC58
<---------
GLK1(2)
--------->
LBD16
<------
ZmHOX2a(1)
--------->
GLK1(2)
---------->
DOF2
--------->
GLK1(2)
------>
ZmHOX2a(1)
<----------
ID1
------->
TEIL
==================================================
bZIP_DOF
<---------
ARR14(1)
agacggagattgaaatgaaaagcttgttagggattctagcttcttcttcttcctccgccgtgtgagaagaagaaggacgagattggaaaacgaatctagg
18423800
<---------
At4g35610
--------->
ZAT14
--------->
ZAT18
--------->
AHL20(2)
--------->
ARR11(3)
*
TSS
<---------
ZAT14
--------->
AHL20(2)
<---------
ARR11(3)
<-------
GAMYB
--------->
At4g35610
--------->
RVE1(1)
<-----------
RAV1(1)
------------>
CBF
--------->
CCA1(1)
-
ARR10
<-----------
RAV1(1)
--------->
GLK1(2)
--------->
AHL20(2)
cctgtcttcgtcgaaaaaatccat
tgttgctct
gttgcactgtagaagaagctgaaacaataaataaaacttagaaaaaaaaatctcagaaataagtgtt
18423900
<------
--------->
ARR11(3)
-------
<---------
ARR11(3)
--------->
At4g35610
<------
--------->
ARR14(2)
<-----------
GT1
--------
<---------
ARR14(2)
<---------
AHL20(1)
<-------
<-------
TEIL
<---------
GLK1(2)
--------->
AHL20(1)
---------
---------->
DOF2
----------->
ARR10
---------->
DOF2
--------->
AHL20(2)
------->
TEIL
<----------
DOF2
--------->
ANAC46
----------->
GT1
<---------
AHL20(2)
----------->
GT1
--
tttgggcttttgaaagtccatatacgaagatttttgggtattgtaaagcccatatatattaaaatttagcatatgacaaaattggttatacgaattttaa
18424000
--------->
AHL20(1)
<---------
AHL20(1)
==========================
HOX2a_HOX2a
<---------
AHL20(2)
<------
ZmHOX2a(2)
--------->
AHL20(2)
<---------
ZAT18
--------->
AHL20(1)
--------->
ZAT18
<---------
AHL20(2)
--------->
AHL20(2)
--------->
ZAT14
---
YAB1
<---------
AHL20(2)
<---------
ANAC46
-->
AHL20(2)
<---------
MYB52(1)
<---------
ANAC58
------>
ZmHOX2a(2)
---
AHL20(2)
--------->
TOE2(3)
---------->
DOF2
<---------
ARR11(3)
<------
ZmHOX2a(1)
->
AHL20(2)
--------->
TOE1(3)
<---------
ZAT6
--------->
ANAC46
<---------
ZAT6
--
AHL20(2)
--------->
ANAC58
<---------
AHL20(2)
<---------
ZAT14
<---------
ARR14(2)
>
YAB1
<---------
ZAT6
<---------
AHL20(1)
<---------
ANAC58
=========================
HOX2a_HOX2a
--------->
GT1
--------->
ANAC58
--------->
AHL20(2)
--------->
REM1(2)
--------->
ARR14(2)
ttagttaattttagagtaagcaaacccttaattaattaaattttagtggaaagcgtgtacactcgagatcgcagatagagatagtaggactcagagaaga
18424100
--------->
ANAC46
--------->
ANAC58
--------->
ANAC58
--------->
SPL7
--------------->
AtSPL8
<---------------
AtSPL3
<---------------
AtSPL8
------->
MYC3
<-
<-------
MYC3
--
=======================================
--------->
YAB1
--------->
ANAC58
--------->
TGA1a
---
<---------
ICU4
================================================
bZIP_DOF
<---------
TOE2(3)
<---------
ATHB12
--------->
MYB46(3)
<---------
TGA1a
<-----------
GT1
--------->
YAB1
<----------
DOF2
--------->
ANAC58
<---------
TOE1(2)
<---------
AHL20(2)
<---
ttgtgccactaatcatgctcttgagcctttctgttcaacaacgaagcaattgcagagaaatcacacgtttgtgtacgacattttttttttttaacgtcga
18424200
<---------
AHL20(1)
--------->
MYB52(2)
--------->
ARR11(3)
<---------
MYB52(1)
--------->
AHL20(1)
<--------
P
--------->
YAB1
<---
<---------
MYB46(3)
----------->
GT1
<---
--------
AHL20(2)
<---------
AHL20(2)
----
------->
ATHB12
--------->
YAB1
--------->
DAG2
<----
=======
bZIP_DOF
<---------
AHL20(2)
----------->
GT1
---------->
DOF2
-----
------>
AHL20(2)
<---------
YAB1
<---------
YAB1
----------->
GT1
----------->
GT1
<----
-------
DOF2
<---------
AHL20(2)
--------->
AHL20(2)
<---------
LBD16
<------
ZmHOX2a(1)
----------->
GT1
tttattggttagttttatattgcaactatattataaaatgaaaatattgttgacggaaaaatggaaattttaggagccagaaaaaagggaaggaaacaat
18424300
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AGI:
At5g45420.1
Description:
myb family transcription factor. similar to DNAJ heat shock N-terminal domain-containing protein / cell division protein-related [Arabidopsis thaliana] (TAIR:AT3G11450.1); similar to hypothetical protein OsI_026897 [Oryza sativa (indica cultivar-group)] (GB:EAZ05665.1); contains InterPro domain Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609); contains InterPro domain SANT, DNA-binding; (InterPro:IPR001005); contains InterPro domain Homeodomain-like (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding (InterPro:IPR014778)
Range:
from: 18421296
to: 18423833
Orientation: Reverse
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.