Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                  --------->At4g35610                                                                <---------ZAT2                                                                <---------At4g35610                                                                --------->ZAT2                                                           <---------At4g35610                                                           <---------GLK1(1)                                                           --------->At4g35610                                                           <---------ZAT2                                  <---------HSFB2a(2)      --------->ZAT2                                  --------->HSFB2a(2)      --------->GLK1(1) ------->RAV1(1)            --------->DAG2                <-----------ARR10    --------->GLK1(2) -ANAC58              <---------------AGL15              <------NtERF2         --------->ARR14(2) -ANAC46              --------------->AGL15            <---------DEAR3(1)     <---------GLK1(2) -ANAC58    <-----------GT1---------->DOF2           <-----------HVH21--------->ANAC46       --------   aacaaaaaaaaaaaaaaccatttacaaaataaagttacagaaaacacaaacgcttcgtcggagctcagcttcccgcttcagaatcggagttgaaatcgaa  18182200                              <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                          --------->HSFB2a(2)                          <---------HSFB2a(2)                          --------->TOE2(3)                       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)                  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                 <xxxxxxxxxxxxxxxxsmallRNA(i)                  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)            <---------At4g35610                 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)             --------->At4g35610       --------                 xxxxxxxxxxxxxxxx>smallRNA(s)     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)    <---------                --------->GLK1(2)    <---------HSFB2a(2)          xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)      <xxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)         <----------DOF2<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)  <---------YAB1<-----------ARR10    --------->HSFB2a(2)        <xxxxxxxxxxxxxxxxxxxsmallRNA(si3) --->GT1       <---------GLK1(2)   --------->At4g35610     --------->ATHB12        <---------HSFB2a(2)   aattttgaaagtttttagaatctcacttccataacgcttctgaaaaaaacactttgaaaacttattggaagctgtagatttcattttggaagtttacgct  18182300                                             <---------YAB1                                           --------->AHL20(2)                                           --------->ATHB51                                        <---------ICU4                                       --------->ICU4                                     <---------ANAC55(2)                                     --------->ANAC55(2)                                <---------ICU4   <---------YAB1                                  <---   <---------AHL20(2)    --------->AHL20(2)<---------AHL20(2)                       <-----------GT1   --------->AHL20(2)   --------->AHL20(2)--------->ICU4                        --------->ARR11(3) ->ANAC46    <---------YAB1  --------->YAB1<---------ICU4                     <---------YAB1     ---- --GT1    <---------YAB1<---------AHL20(2)<---------YAB1                --------->AHL20(2)       ----   tccatttaaattttgattattcacaaataaataagaatcacataattatttttgatagtttttgttttacaaaaaaaaatatgattttgcaatttagaat  18182400                                  --------->MYB52(1)                           <---------GLK1(1)                           --------->GLK1(1)                       <---------TOE2(3)                     ---------->DOF2                 <---------------AGL15                 --------------->AGL15                <-----------------AGL1                ----------------->AGL2                <-----------------AG ------->GAMYB         --------->AHL20(2)           --------->LBD16 ------AHL20(1) <-----------------AGL2               <------ZmHOX2a(1)                <---------LBD16 ----->ARR11(3) ----------------->AGL3              ----------->GT1                  --------->MYB52(1) ----->AHL20(1) <-----------------AGL3       ---------->DOF2              --------->AtMYB61 ---------   attttgcatactagcctttctattaaaggaaatcgctaaccgaaatcgaaagtcaggaaaaataaaaactaataaaccaaaactctctaccggagaaaga  18182500                                                  <---------DAG2                                                  <----------DOF2                                              --------->WRKY12                                          --------->DAG2            <---------ICU4               ----                     <------NtERF2       ---------->DOF2   <---------ARR14(2)                <------- ->DOF2           ---------->ID1      --------->YAB1  --------->AtLEC2    <----------DOF2<----------DOF2   gggtttgaaactttctatttgtcgtcgtgaggctgtcgaataataaagttgactttatgcaaatttgaactaatgactttgggagcgaagactttttaca  18182600                                                                     --------->ZAT14                                                             --------->ANAC46                                                         <---------ARR14(2)                                                         --------->ARR14(2)                                 --------->ANAC58       --------->ATERF1(1)                    <-----                                 --------->ANAC46       <-------GAMYB<---------ZAT14       <---------ZAT2                                --------->LBD16        <---------DEAR3(2)                  --------->At4g35610                             <------ZmHOX2a(2)         <---------MYB46(3)               --------->LBD16                             --------->CCA1(2)        <---------DEAR3(1)               --------->DEAR3(1)                            --------->ARR11(3)        <---------ANAC58                --------->ANAC46                            --------->AGP1            <---------ANAC58              <---------ALFIN1      ---------->DOF2       <---------ARR14(2)        <---------RAP2.6(2)      --------->GLK1(1)   ----------->GT1          --------->ARR14(2)        <---------ANAC46         <---------GLK1(1) ------>DOF2 ----------->GT1<---------ARR11(3)        <---------DREB2C(2) --------->ZAT14  --------->ZAT2 ----GT1  *TSS    ---------->DOF2--------->ANAC58   ------------>AtMYB77  <---------ZAT14  <---------At4g35610   aaagaatgtaaagagcgattaaaagcttaagatccacgaaaaatccacttcccatggcggttccctccatctacagtgaagaaatcccaccgcagcacca  18182700                                   --------->HSFC1(2)                                ---------->DOF2                            --------->ANAC58       <-------GAMYB                            --------->ANAC58  <---------GLK1(1)              <------ZmHOX2a(2)                        --------->At4g35610   --------->GLK1(1)             <---------ARR11(3)                      <------ZmHOX2a(1)  <---------LBD16                    --------->ARR11(3)    <--                    --------->ALFIN1     ------>ZmHOX2a(1)           --------->ANAC58      <---------At4g35610                 <------ZmHOX2a(1) <---------HSFC1(2)              --------->CCA1(2)       --------->At4g35610 ----ALFIN1   <---------At4g35610--------->DAG2   <-----------RAV1(1)--------->ANAC58<----------DOF2   agtcttcatcaacttcagaggagaggagctacgaaaaagcttcctcgggtttctgttgaaggccatgagagacgcgaagatcaacgtctttacagatgag  18182800                                                                                  <-------TEIL                                                                                 --------->CCA1(2)                                                                        <---------HSFB2a(2)                                                                    ------>ZmHOX2a(2)                         --------->GLK1(2)    <---------ARR14(2)   <------ZmHOX2a(2)                         <---------ARR11(3)  ==============================HOX2a_HOX2a              <                        <---------GLK1(2)    <------ZmHOX2a(1)    --------->ARR11(3)             <---                 --------->CCA1(2)           =============================HOX2a_HOX2a            <---                <---------ARR11(3)    <------ZmHOX2a(1)   <------NtERF2 --------->HSFB2a(2)     <----              <---------ZAT6<----------DOF2<---------TOE2(3)      <---------ARR11(3)            <----   <-----------HVH21 --------->ANAC46 ====================================HOX2a_HOX2a--------->ANAC46 ----ZmHOX2a(2) --------->ARR11(3)    =====================================HOX2a_HOX2a         <-----   atcgaagtcagaggtagagatatacagaatcttttgagcaggattgaggaatcgagagtcgccattgcgatcttatcgaagagatacactgaatcgagtt  18182900 ---------MYB46(3)                 <---------WRKY18(1) ---MYB83                         --------->WRKY38(1) <---------YAB1 ---MYB46(1)                     <---------WOX13(1)  <-----------HVH21                       -------- -----MYB46(3)             --------->MYB52(1) --------->ZAT2                              --------->At5g28300 -----AtMYB61     --------->ICU4--------->ARR14(2)<-------GAMYB                          ----------->GT1 ---P<---------AtLEC2<---------REM1(1)        <---------ZAT2   <---------ATHB12   ----------->RAV1(1)   ggtgtttggatgaattagtgaagatgaaggaacggattgaccaagacgagctcgttgtcattccaatcttctacagattggatgccacaaactgtaaaag  18183000                                                                    --------->ANAC58      ------>ZmHOX2a(2)                                                                    --------->ANAC58    --------->ARR11(3)                                                                 <------ZmHOX2a(2)  <----------DOF2                                                                --------->ARR11(3)<---------HSFC1(2)                  --------->ICU4                               <------ZmHOX2a(1)  --------->HSFC1(2)         <----------DOF2                                       ==================================HOX2a_HOX2a -->DOF2<---------DAG2  <---------LBD16                    ---------->DOF2  ---------->DOF2        --   actcgagggacctttcggcgataattttcggaatttggagagagactatcgaagcgagcctgaaaggatcaagaaatggaaagaagctttgatctctatt  18183100  Previous    Next  AGI:  At5g45000.1    Description:  transmembrane receptor. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G51270.2); similar to unknown [Arabidopsis lyrata] (GB:AAO42473.1); contains InterPro domain Toll-Interleukin receptor; (InterPro:IPR000157) Range:  from: 18182610    to: 18184420    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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