Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                             <---------AHL20(2)                                                          --------->ARR11(3)                                                          <---------AHL20(1)                                                          --------->AHL20(1)    <-------TEIL                                          <---------ARR11(3) ---------------AtSPL8                                    <---------AHL20(2) -------------->AtSPL3                                    --------->AHL20(2) -----ANAC46                                         <---------AHL20(2) ---GAMYB                   --------->WOX13(1)       --------->AHL20(2) -MYB46(1)               ------>MYB83            --------->AHL20(2) -MYB83                  ------>MYB46(1)       --------->ANAC58 ---MYB46(3)       ----------->HVH21           ----------->GT1                   --------->YAB1 -->MYB55(2)      --------->ETT(1)             --------->ANAC58            <---------HSFB2a(2) --MYB55(1)     <-----------HVH21   --------->AHL20(2)   --------->AHL20(2)--------->HSFB2a(2) ->ALFIN1   --------->MYB52(1)      <---------AHL20(2)<---------AHL20(2)--------->ARR11(3)      <----   ttgaagtacatgaataagggtcggacctagcaatccattttaatgcagcaagtaattaaatatatttgaaaaaacatctggaatcagaaaacaaatatta  16408700                               ------>ZmHOX2a(1)                            --------->AHL20(1)                              <---------MYB59                               <---------AHL20(1)                         =============HOX2a_HOX2a                           --------->AHL20(2)                         ------>ZmHOX2a(2)                      <---------AHL20(2)        <-------TEIL                        ==============HOX2a_HOX2a              <---------AHL20(1)      ----------->GT1                        <------ZmHOX2a(2)                      --------->AHL20(1)     --------->DAG2                       --------->ARR14(2)                      --------->AHL20(2)   ---------->DOF2                       <---------ARR11(3)                      <---------AHL20(2) <---------YAB1    ------->TEIL       --------->ARR11(3)                     --------->AHL20(2)  <---------HSFB2a(2) -----AHL20(2)         <---------ARR14(2)                --------->YAB1     <---------AHL20(2)   aaaatggatgtaaacttggagaaacgatctgtcctaacaacaatctctatttgagtcaaacaaaattaatttgagtaataaattctgaaaggtgcaaaat  16408800                                <---------YAB1                                --------->ICU4                              <--------ATHB1                              <--------HAHB4             ---------->DOF2  --------->YAB1         --------->YAB1       <---------ICU4                   --------->ANAC55(2)  <---------AHL20(2)          --------->ATHB12                 <---------ANAC55(2)  --------->AHL20(2)          --------->ATHB51               <---------AHL20(2)  <--------HAHB4             --------->AHL20(2)              <-----------GT1  --------->ATHB51           <---------ATHB51            --------->AHL20(2)  -------->ATHB1             <---------ATHB12            --------->ATHB51               ---------->DOF2  <---------ICU4             --------->ICU4             <---------MYB52(1)          --------->ANAC58  --------->ATHB12    <---------ARR14(2)                --------->ICU4              --------->ANAC58 <---------ATHB12     --------->ARR14(2)             --------->MYB46(3)      <---------ARR14(2) <---------ATHB51     --------->GLK1(2)  ----------->GT1<---------YAB1       --------->ARR14(2) --------->ICU4      <---------GLK1(2) <---------ZAT14<---------ICU4   <---------ARR14(2)   gcaattatttgtcataaaagagagaatcccaataattagtgtatagtataatctaaccattatttacttaacaaatatggatttggaagcaaaaggaaat  16408900                    ------->TEIL               <---------AtLEC2                                                                   <--          --------->ARR14(2)                                                  <---------AHL20(2)<----          --------->GLK1(2)                                             <------ZmHOX2a(1)       <----         --------->ARR14(2)                          ---------->DOF2   <----------ID1          <-----         <---------GLK1(2)                         <---------YAB1   ---------->DOF2            ------         <---------ARR14(2)                   <-----------GT1 --------->AHL20(2)               <-----   gactgtaaccagattctgcatgaaccccttcttatctattcaatgtattcaccattaatgccaatataacaaaaggacatatattttggacttccaagat  16409000                                         --------->ARR11(3)     <---------AtMYB61                   <---------GLK1(2) -------AHL20(2)                         <---------ARR11(3) -----CCA1(1)               --------->AHL20(2)     --------->YAB1                       ----------->GT1 -----RVE1(1)             --------->ARR11(3)      <---------ATHB12                   --------->YAB1<- ----ARR11(3)             <---------ARR11(3)  ------------>CBF                       <------ZmHOX2a(1) --->ARR11(3)      <----------DOF2     <---------TOE2(3)        *TSS               <---------TOE2(3) ----GLK1(2)     ------->TEIL<---------AHL20(2) --------->WOX13(1)         <---------YAB1       <----   tttttttttggtcgaaatggactttcaagattttatattctaagattttgcaatcaaaactcagtagaacaaaaatgaagattgtaaggatagtgaaatc  16409100                                                                --------->YAB1                                                                <---------ICU4                                                               --------->ICU4                                                             --------->YAB1                                                             <---------ICU4                                                            --------->ICU4                                                            <---------YAB1                                                          --------->YAB1                                                         <---------YAB1                                                        <---------ARR11(3)                               --------->KAN4(2)       --------->YAB1                              <---------ICU4          --------->ICU4                  <---------ANAC58                    <---------YAB1       <-----------HVH21     <---------YAB1         --------->YAB1                                --- --------DAG2     <---------ANAC58                  <---------ICU4                              ----- -------GT1  <-----------RAV1(1)   <----------DOF2 --------->ICU4                             <------   accttaccttgtcatatgttgccttctcttgatcattctttggttattgtctcatcatgatcataatcatcactcttgtgctccatacatgaatactatc  16409200                                                                                             <------MYB46(1)                                                                                             <------MYB83                                                      --------->YAB1           --------->AHL20(1)                                                     <---------YAB1            <---------AHL20(1)                                              ------>ZmHOX2a(2)                --------->ARR11(3)                                          <---------YAB1       <---------AHL20(2)  <---------YAB1                                      <---------GLK1(2)    <----------DOF2  --------->AHL20(2)                                    --------->ICU4 <---------ICU4         --------->TOE2(3) --------- <------ZmHOX2a(1)                  <---------YAB1 --------->YAB1      <-----------GT1   --------->ARR11(1) ------>At4g35610                <------ZmHOX2a(2)<---------ATHB51 <---------AHL20(2) <---------WOX13(1) ---->YAB1                      --------->ARR11(3)--------->ICU4   --------->AHL20(2)<--------------- -----HVH21    <---------CCA1(2)<---------ARR11(3)<---------ATHB12--------->AHL20(2) ================   agaggaacacaattctcgcatcttcaacctgtaagatcaagattatgatccaattatgatgctttttatttaataacattatatattgatagatttggta  16409300                                                                          <---------YAB1                                                                        <-----------GT1            <---------KAN4(2)                                        <---------ICU4            --------->GLK1(2)                                       <---------YAB1            --------->ARR14(2)                  ----------->RAV1(1) --------->ICU4           <---------GLK1(2)                  --------->ZAT2   ----------->GT1      --------->TOE1(2)                       <---------At4g35610<---------YAB1     --------->YAB1                <---------------AGL15     <---------ARR11(3)    <---------YAB1   <---------ANAC58         --------->At4g35610--------->ICU4 >MYB59   <------ZmHOX2a(1)        --------------->AGL15   --------->ANAC58                         - --AG--------->ATHB12<---------ANAC58---------->DOF2       --------->ANAC58           --------->HSFB2a(2) ==================================================MADS_MADS --------->ARR11(3)  --------->ETT(2) <--   tttctgatcataggaatcttcaggcttatcgagtctacttaaagaagcagctacagaagacaagatagtgattattaccatggtcgatcgagaatgggca  16409400                                 <---------ZAT14                                 --------->ZAT14                                 --------->ZAT18                                 <---------SPL7                               <---------------AtSPL8                               <---------------AtSPL3                                     <---------At4g35610                              <------------------SPL14                                <----------DOF2                         ------>ZmHOX2a(1)             ------>MYB83                  <---------ANAC58                         --------->LBD16               ------>MYB46(1)               <---------ANAC58                  ==============HOX2a_HOX2a   ---------->DOF2                     <---------RAP2.6(2)                  ------>ZmHOX2a(2)    --------->ARR14(2)                     <-------GAMYB ---------->RAV1(2)     <---------LBD16<---------ARR14(2)                    <---------MYB46(3)     < -------ARR14(2)<---------ARR11(3) <---------LBD16   <---------MYB59         ------>ZmHOX2a(2)      -   aaacctgactctattcttgatctattcctggagagtgtacggattggagaaagaaccaaacacttgctaaaccatttgatcgttgtggctttagatgatc  16409500                           <---------ALFIN1                           ----------->RAV1(1)                          --------->MYB46(3)        <---------HSFC1(1)                         --------->ANAC58           --------->HSFB2a(2)                         --------->ANAC58           <---------HSFB2a(2)                       <---------ALFIN1          --------->GLK1(2)                                 <-                      --------->MYB46(3)      --------->ARR11(3)   --------->GLK1(2)               <-                 <---------ANAC58             <---------ARR11(3)   <---------ARR11(3)            <---                 <---------ANAC58     --------->TOE1(3)           <---------GLK1(2)             <---- ---------ARR11(3)  --------->PCF2    --------->TOE2(3)        --------->YAB1       --------->ARR11(3) -------->ARR11(3)  <---------ZAT18<-----------GT1  --------->HSFC1(1)     <-----------GT1 <---------   aagctcttcgatattgtcttcgtgcccacccacattgttaccttcatagatattctagaaaaaaatcagaatctttaaaaccagatggtcttgttaccgg  16409600  Previous    Next  AGI:  At5g40900.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G14590.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G19970.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48999.1); contains domain REGULATORY PROTEIN (PTHR10483:SF6); contains domain PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN (PTHR10483) Range:  from: 16409064    to: 16410603    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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