Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                             <---------AHL20(2)                                                          <---------AHL20(2)                                                          --------->AHL20(2)                                                          --------->AHL20(1)    <-------TEIL                                          <---------AHL20(1) ---------------AtSPL8                                    --------->ARR11(3) -------------->AtSPL3                                    <---------ARR11(3) -----ANAC46                                         --------->AHL20(2) ---GAMYB                   --------->WOX13(1)       <---------AHL20(2) -MYB46(1)               ------>MYB46(1)         --------->AHL20(2) -MYB83                  ------>MYB83          ----------->GT1 -->MYB55(2)       ----------->HVH21           --------->ANAC58                  --------->YAB1 ---MYB46(3)      --------->ETT(1)             --------->ANAC58            <---------HSFB2a(2) --MYB55(1)     <-----------HVH21   <---------AHL20(2)   --------->AHL20(2)--------->HSFB2a(2) ->ALFIN1   --------->MYB52(1)      --------->AHL20(2)<---------AHL20(2)--------->ARR11(3)      <----   ttgaagtacatgaataagggtcggacctagcaatccattttaatgcagcaagtaattaaatatatttgaaaaaacatctggaatcagaaaacaaatatta  16408700                               ------>ZmHOX2a(1)                            <---------AHL20(1)                              <---------MYB59                               --------->AHL20(1)                         =============HOX2a_HOX2a                           --------->AHL20(2)                         ------>ZmHOX2a(2)                      <---------AHL20(2)        <-------TEIL                        ==============HOX2a_HOX2a              <---------AHL20(2)      ----------->GT1                        <------ZmHOX2a(2)                      --------->AHL20(1)     --------->DAG2                       <---------ARR11(3)                      <---------AHL20(1)   ---------->DOF2                       --------->ARR14(2)                      --------->AHL20(2) <---------HSFB2a(2)    ------->TEIL       <---------ARR14(2)                     --------->AHL20(2)  <---------YAB1 -----AHL20(2)         --------->ARR11(3)                --------->YAB1     <---------AHL20(2)   aaaatggatgtaaacttggagaaacgatctgtcctaacaacaatctctatttgagtcaaacaaaattaatttgagtaataaattctgaaaggtgcaaaat  16408800                                <---------YAB1                                --------->ICU4                              <---------ICU4                              --------->ATHB12             ---------->DOF2  --------->ATHB51         --------->YAB1       --------->YAB1                   --------->ANAC55(2)  --------->ATHB51            <--------HAHB4                   <---------ANAC55(2)  <---------ICU4              <--------ATHB1                 <---------AHL20(2)  --------->ATHB12           --------->AHL20(2)              <-----------GT1  --------->AHL20(2)         --------->ICU4              --------->AHL20(2)  <---------AHL20(2)         <---------ATHB12            --------->ATHB51               ---------->DOF2  -------->ATHB1             <---------ATHB51           <---------YAB1              --------->ANAC58  <--------HAHB4      --------->ARR14(2)                --------->ICU4              --------->ANAC58 <---------ATHB51     --------->GLK1(2)              --------->MYB46(3)      --------->ARR14(2) <---------ATHB12     <---------ARR14(2) ----------->GT1<---------MYB52(1)   <---------ARR14(2) --------->ICU4      <---------GLK1(2) <---------ZAT14<---------ICU4   <---------ARR14(2)   gcaattatttgtcataaaagagagaatcccaataattagtgtatagtataatctaaccattatttacttaacaaatatggatttggaagcaaaaggaaat  16408900                    ------->TEIL               <---------AtLEC2                                                                   <--          --------->GLK1(2)                                                   <---------AHL20(2)<----          --------->ARR14(2)                                            <------ZmHOX2a(1)       <----         <---------GLK1(2)                           ---------->DOF2   <----------ID1          <-----         <---------ARR14(2)                        <---------YAB1   ---------->DOF2            ------         --------->ARR14(2)                   <-----------GT1 --------->AHL20(2)               <-----   gactgtaaccagattctgcatgaaccccttcttatctattcaatgtattcaccattaatgccaatataacaaaaggacatatattttggacttccaagat  16409000                                         --------->ARR11(3)     <---------AtMYB61                   <---------GLK1(2) -------AHL20(2)                         <---------ARR11(3) -----CCA1(1)               --------->AHL20(2)     --------->YAB1                       ----------->GT1 -----RVE1(1)             --------->ARR11(3)      <---------ATHB12                   --------->YAB1<- ----ARR11(3)             <---------ARR11(3)  ------------>CBF                       <------ZmHOX2a(1) --->ARR11(3)      <----------DOF2     <---------TOE2(3)        *TSS               <---------TOE2(3) ----GLK1(2)     ------->TEIL<---------AHL20(2) --------->WOX13(1)         <---------YAB1       <----   tttttttttggtcgaaatggactttcaagattttatattctaagattttgcaatcaaaactcagtagaacaaaaatgaagattgtaaggatagtgaaatc  16409100                                                                --------->YAB1                                                                <---------ICU4                                                               --------->ICU4                                                             --------->YAB1                                                             <---------ICU4                                                            --------->ICU4                                                            <---------YAB1                                                          --------->YAB1                                                         <---------YAB1                                                        <---------ARR11(3)                               --------->KAN4(2)       --------->YAB1                              <---------ICU4          --------->ICU4                  <---------ANAC58                    <---------YAB1       <-----------HVH21     <---------YAB1         --------->YAB1                                --- --------DAG2     <---------ANAC58                  <---------ICU4                              ----- -------GT1  <-----------RAV1(1)   <----------DOF2 --------->ICU4                             <------   accttaccttgtcatatgttgccttctcttgatcattctttggttattgtctcatcatgatcataatcatcactcttgtgctccatacatgaatactatc  16409200                                                                                             <------MYB46(1)                                                                                             <------MYB83                                                      --------->YAB1           --------->ARR11(3)                                                     <---------YAB1            --------->AHL20(1)                                              ------>ZmHOX2a(2)                <---------AHL20(1)                                          <---------YAB1       <---------AHL20(2)  <---------YAB1                                      <---------GLK1(2)    <----------DOF2  --------->AHL20(2)                                    <---------YAB1 --------->YAB1         --------->TOE2(3) --------- <------ZmHOX2a(1)                  --------->ICU4 <---------ICU4      <-----------GT1   --------->ARR11(1) ------>At4g35610                <------ZmHOX2a(2)--------->ICU4   <---------AHL20(2) <---------WOX13(1) ---->YAB1                      <---------ARR11(3)<---------ATHB12 --------->AHL20(2)================ -----HVH21    <---------CCA1(2)--------->ARR11(3)<---------ATHB51--------->AHL20(2) <---------------   agaggaacacaattctcgcatcttcaacctgtaagatcaagattatgatccaattatgatgctttttatttaataacattatatattgatagatttggta  16409300                                                                          <---------YAB1                                                                        <-----------GT1            <---------KAN4(2)                                        <---------ICU4            --------->GLK1(2)                                       <---------YAB1            --------->ARR14(2)                  ----------->RAV1(1) --------->ICU4           <---------GLK1(2)                  --------->ZAT2   ----------->GT1      --------->TOE1(2)                       --------->At4g35610<---------YAB1     --------->ATHB12              <---------------AGL15     <---------ARR11(3)    <---------YAB1   <---------ANAC58         <---------At4g35610--------->ICU4 >MYB59   <------ZmHOX2a(1)        --------------->AGL15   --------->ANAC58                         - ==================================================MADS_MADS --------->ARR11(3)       --------->HSFB2a(2) --AG--------->YAB1  <---------ANAC58---------->DOF2       --------->ANAC58      --------->ETT(2) <--   tttctgatcataggaatcttcaggcttatcgagtctacttaaagaagcagctacagaagacaagatagtgattattaccatggtcgatcgagaatgggca  16409400                                 --------->ZAT18                                 --------->ZAT14                                 <---------ZAT14                                 <---------SPL7                               <---------------AtSPL8                               <---------------AtSPL3                                     <---------At4g35610                              <------------------SPL14                                <----------DOF2                         --------->LBD16               ------>MYB46(1)               <---------ANAC58                         ------>ZmHOX2a(1)             ------>MYB83                  <---------ANAC58                  ==============HOX2a_HOX2a   ---------->DOF2                     <---------RAP2.6(2)                  ------>ZmHOX2a(2)    --------->ARR14(2)                     <-------GAMYB ---------->RAV1(2)     <---------LBD16<---------ARR14(2)                    ------>ZmHOX2a(2)      < -------ARR14(2)<---------ARR11(3) <---------LBD16   <---------MYB59         <---------MYB46(3)     -   aaacctgactctattcttgatctattcctggagagtgtacggattggagaaagaaccaaacacttgctaaaccatttgatcgttgtggctttagatgatc  16409500                           <---------ALFIN1                           ----------->RAV1(1)                          --------->MYB46(3)        --------->HSFC1(1)                         --------->ANAC58           --------->HSFB2a(2)                         --------->ANAC58           <---------HSFB2a(2)                       <---------ALFIN1          --------->GLK1(2)                                 <-                      --------->MYB46(3)      <---------ARR11(3)   --------->GLK1(2)               <-                 <---------ANAC58             --------->ARR11(3)   <---------ARR11(3)            <---                 <---------ANAC58     --------->TOE1(3)           <---------GLK1(2)             <---- ---------ARR11(3)  <---------ZAT18   --------->TOE2(3)        --------->YAB1       --------->ARR11(3) -------->ARR11(3)  --------->PCF2 <-----------GT1  <---------HSFC1(1)     <-----------GT1 <---------   aagctcttcgatattgtcttcgtgcccacccacattgttaccttcatagatattctagaaaaaaatcagaatctttaaaaccagatggtcttgttaccgg  16409600  Previous    Next  AGI:  At5g40900.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G14590.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G19970.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48999.1); contains domain REGULATORY PROTEIN (PTHR10483:SF6); contains domain PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN (PTHR10483) Range:  from: 16409064    to: 16410603    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.