Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                  -----                                                                                                -----                                                                                                -----                                                                                        ---------->DOF2                                                       <---------MYB52(2)             --------->ARR11(1) <---------ATHB12                              <---------GLK1(1)        ----------->GT1 <-------TEIL -------->ANAC58                           <--------P <---------At4g35610             --------->ARR11(3) -------->ANAC58                          --------->At5g28300        <---------AHL20(2)--------->CCA1(2) ------->WOX13(1)    --------->ANAC46    ------->GAMYB--------->At4g35610         ---------->DOF2 <-- ---->YAB1      <---------AHL20(2)    --------->MYB52(1)   --------->MYB46(3)    --------->AHL20(2)   acaatcaagtcaagagaattaatacacaagaacatagaaataacggtagatttctcagcgaaccaattcatataatgtaacaataaaagatacagcccaa  14988100                               -------->ATHB1                               --------->YAB1                               <--------ATHB1                               --------->ATHB51                               <---------ICU4                              <---------ATHB51                              --------->ICU4                              <---------ATHB12                              <---------YAB1 ---->ANAC58       --------->GLK1(2) ---->ANAC58      <---------ARR11(3)                  --------->DAG2                    --------->AGP1 ---->ANAC46      --------->ARR11(3)       <----------DOF2                            --------->LBD16 -------GLK1(2) <---------TOE2(3)    --------->WRKY38(1)                    <-----------GT1     -----   gaaactcaagagaagtttgagattttgaaacaataattgttgactctttgtgagaaaaattggtttttggcaacgtttttactaaacccagaactataac  14988200                                                                                                 ----                                                      --------->At4g35610                     ------>NtERF2                                             ------>MYB83                                  --------->LBD16                               --------->REM1(1)    --------->YAB1                        --------->HSFB2a(2)                          <------ZmHOX2a(1)  ------>MYB46(1)                             <---------LBD16 ---->ZAT6            ---------->DOF2   <-----------GT1            ---------->DOF2  <-----------GT1<-   tctaaactacttcaatggaagaacaaaaggactacaactaataaaccaacttaatcagcaaaacaaaatgaaagttagaaatttgtttacctccggagcc  14988300                                                  --------->ARR11(3)                                                  <---------ARR11(3)                                            <---------HSFB2a(2)                                            --------->HSFB2a(2)                                         <----------DOF2           --------->HSFB2a(2)                                        ------>ZmHOX2a(2)          <---------HSFB2a(2)                                      <---------ARR11(3)          <---------LBD16      ----------->GT1          <---------ARR14(2)          --------->ARR11(3)          <-----------------AGL2     ----------->GT1              --------->CCA1(2)       <<<<<<<<<TAC1         <-------TEIL     <--- ----->WOX13(1)                  <---------ARR11(3)     --------->ZAT6<---------ARR14(2)         <--- --------ATHB12---------->DOF2   --------->ARR11(1)   <-----------GT1 --------->ARR14(2)         <---   aattaagaagtgaatcccaaagacccatctccaaagatttgatcttttcgaagatttaacactcgagttctggatttggagattcaaaatcgaaatattt  14988400                                                                                <---------MYB59                                                                        --------->GLK1(2)                                                                        <---------ARR14(2)            <---------GLK1(2)                                           --------->ARR14(2) ------ANAC58                                                        ----------->ARR10  <---------TOE2(3) ------ANAC46                                               <------ZmHOX2a(1) ------->TEIL       <--- ------ANAC58                                         <------ZmHOX2a(1)<---------GLK1(2)<---------TOE1(3)   cgtagccctagttcgattcttgaattttgctagatgggtaatgagagaaacagagaggaagaggaacagggaagaatctggaccttacttaaggtaatag  14988500                                                          <----------DOF2                                                         <---------ANAC58                                                         <---------ANAC46                                                         <---------ANAC58                                                    <-----------RAV1(1)                                                  <------------CBF                                              --------->ANAC58                                   ----                                              --------->ANAC46                                  <----                                          <-----------HVH21                                     <----         ----------->GT1                  *TSS--------->ANAC58              <-----------GT1     <---- ------GLK1(2) --------->MYB52(1)        --------->bZIP60(1) --------->HSFB2a(2)    <----------DOF2   aatttgtcagtttgtgaaaacggtgtctcttccttcactcttggtgtcacgctattgttgcttttagaattttagatgtcaccattctttttttttttgt  14988600                                                                ----------->GT1                                                                ------------------------>ANAC81                                                               --------->DAG2                                                          --------->AHL20(2)             <---------------AGL15                    --------->AHL20(2)             --------------->AGL15                    <---------AHL20(2)    <----------DOF2                               --------->AHL20(2)     --------->ANAC46 ----------->AtSPL8                      --------->MYB52(1)   ---------->DOF2 -----ANAC58 <----------DOF2           <---------MYB52(2) <---------AHL20(2)           --------->At4g35610 -----ANAC46<-----------------AGL1  <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) --------->ANAC58 -----ANAC58<-----------------AGL2--------->YAB1  <---------AHL20(2)     --------->ANAC58   <--------   gtgttccttttatttcttttatgggaaatttgcaaagaataactaacaaaaatttataaattaaaaaagtaatacaagaaaaaaaaaacagctatattct  14988700             --------->YAB1             -------->HAHB4             <---------ICU4            --------->ICU4            <---------ATHB51            <---------YAB1           <---------AHL20(2)            --------->TOE2(3)          --------->YAB1             xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)        --------->AHL20(2)           <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)       <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)       <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                            <----------DOF2    <---------AHL20(2)             --------------->AtSPL8          ------>ZmHOX2a(1)   --------->AHL20(2)   <-----------GT1  <---------DAG2       <------------------------ANAC81  <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)   <---------MYB59   ------>ZmHOX2a(1) -GLK1(2)<---------AHL20(2)   <----------DOF2           ------>ZmHOX2a(1)       <----------DOF2   ctatattatatataataatggcatatttacctctttctctctaccttattctaagttcctccttctctcctctctttttcatctttttttttttttttct  14988800                                                                                                 <---                                                                                                 xxxx                                                                                                 xxxx                                                                                                 xxxx                                                                                           <---------ANAC46                                                                                           <---------ANAC58                                                                                          --------->ATHB12                                                                                     xxxxxxxxxxxxxxxx                                                                                     xxxxxxxxxxxxxxxx                                                                                     <---------YAB1 <                                                                                   <---------At4g35610                                                                                   <xxxxxxxxxxxxxxxxx                                                                        --------------->AGL15   <----                                          --------->ANAC58              =============================                                          --------->ANAC58              xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                         <---------------------WRI1     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                                        --------->MYB52(1)          <---------ARR14(2)  <---------WOX13(1)                                       --------->TOE1(2)            --------->ARR14(2)xxxxxxxxxxxxxxx                                       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)     xxxxxxxxxxxxxxxxxxxx                                      <---------MYB52(2)           <---------At4g35610--------->ATHB12                                      --------->MYB46(3)   --------->ARR11(3)    xxxxxxxxxxxxxxxxxxxx                                   ------->GAMYB<----------ID1     --------->At4g35610xxxxxxxxxxxxxxx                                  --------->MYB46(3)       <---------GLK1(2)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                                  <---------MYB52(2)       <---------ARR11(3)    xxxxxxxxxxxxxxxx>smallRNA(s)                               <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)<xxxxxxxxxxxxxxxsmallRNA(le3) <----                             --------->ZAT6  ---------->DOF2<xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)xxxxxx                          <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) <xxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                   <-----------GT1xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)             <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)     xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)<---------ANAC58           <----------DOF2<xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) <xxxxxxxxxxxxxxxxxxxsmallRNA(le3)<----   ctcaatctcttctcttttttttttctgtataacacaacaaacaaacgaaaagaacaaactagatttttcagataccacttatgttatctgattgcttggg  14988900  ---------->DOF2 -----P   ------->TEIL xxxxxxxxxxxxxxxxxx>smallRNA(si3) xxxxxxxxxxxxxxxxxx>smallRNA(le3) xxxxxxxxxxxxxxxxxxx>smallRNA(si3) >smallRNA(i) xxxxxxx>smallRNA(le3) xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) xxxxxxsmallRNA(fl3) ---GAMYB<---------CCA1(2) ======================================================================================MADS_MADS xxxxxxxx>smallRNA(si3)                                                    <---------------AtSPL8 xxx>smallRNA(si3)                                         --------->AHL20(2) xxx>smallRNA(le3)                               <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) xxxxxxxx>smallRNA(le3)                        <---------YAB1  <-----------GT1 -----ANAC58                 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)   ----------------->AG         xxx xxxxxxxxxxxxxxxxx>smallRNA(le3)           ----------->GT1 <---------AHL20(1)                     --- -----ANAC58               <---------------------WRI1      <---------AHL20(2)         <----------DOF2   ttgccaaagttgtatcttagggtatagttttctatacatccaaaatagtataatacaacattttatttctatccaaaatagtacaagtctttacttacaa  14989000  Previous    Next  AGI:  At5g37680.1    Description:  ATARLA1A (ADP-ribosylation factor-like A1A); GTP binding. similar to ATARLA1D (ADP-ribosylation factor-like A1D), GTP binding [Arabidopsis thaliana] (TAIR:AT5G67560.1); similar to Os02g0732500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048027.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN83936.1); contains InterPro domain Ras GTPase; (InterPro:IPR001806); contains InterPro domain Small GTP-binding protein; (InterPro:IPR005225); contains InterPro domain ARF/SAR superfamily; (InterPro:IPR006689) Range:  from: 14986826    to: 14988542    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version