Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                            <------ZmHOX2a(1)    <------MYB83                                    --------->ATHB12           <------MYB46(1)                                  --------------->AGL15   --------->ATHB12        <---------ICU4           <---------ANAC58        <---------YAB1       --------->ICU4            <---------ANAC58     --------->ARR14(2)     --------->YAB1              --------->ANAC55(2)  <---------ARR14(2)        --------->GLK1(2) --------->GT1                 <---------AHL20(2)    <------ZmHOX2a(1)      --------->YAB1 ->HSFB2a(2)                   <-----------GT1--------->MYB52(1)           <---------YAB1  ---------- --HSFB2a(2)          <----------DOF2    <---------YAB1--------->CCA1(2) --------->YAB1 ------->TEIL   acagaaataaaaattagttgtctcctttgttatttacttgattaggattaacagaggatatgatttggttcacattgatcataatctatgaacttgtgaa  12681300                          <---------ICU4                          -------->HAHB4                          <--------ATHB1                          --------->ATHB51                          --------->YAB1                         <---------YAB1                      <---------YAB1                     <---------AHL20(2)                     --------->AHL20(1)                     --------->AHL20(2)                    --------->YAB1                   <---------YAB1                 <---------ICU4                 <--------HAHB4                 --------->YAB1                                      <---------WOX13(1)                <------ZmHOX2a(2)                                   >>>>>>>>>ARR2   --------->AHL20(2)        --------->ATHB12 <---------ATHB51                         <---------YAB1<---------YAB1     <-    <---------WRKY18(1)--------->YAB1                             <---------AHL20(2)<---------AHL20(2) ->GT1<---------WOX13(1) --------->ICU4                  --------->ICU4         <---------AHL20(2) --   attgtttgactgatttggatcattataataattgtgtttttggtttttaagttgatgacataatcaatttgattgtttgttttttattaattgtgtctct  12681400            <---------AHL20(2)           --------->AHL20(2)                                                       <------ZmHOX2a(1)           <---------AHL20(2)                                                 --------->ATHB12   --------->WRKY18(1)                                 <---------ANAC58     --------------->AGL15  --------->At5g28300                             <---------ICU4           --------->ANAC55(2)  <--------ZAP1                                 <---------AHL20(2)         <---------ANAC58  <-----------HVH21                <---------HSFB2a(2) <---------bZIP60(2) <---------ANAC58 ----------->GT1                   --------->HSFB2a(2) <---------ANAC58  <---------AHL20(2)         - --------ZAT18                  <---------YAB1 --------->YAB1            <-----------GT1--------->MYB52(1) ------->LBD16          <----------DOF2       --------->AHL20(2)<----------DOF2    <---------YAB1  <-   gcgcggtcaaaaatttttttttatgtctttggtttttatagaacataaataaaaatgacttgtctgctttgttatttacttgattaggattaacagaaaa  12681500                                                                  -------->HAHB4                                                                  --------->ATHB51                --------->YAB1                                    <---------ICU4                <--------HAHB4                                    <--------ATHB1               --------->ICU4                                     --------->YAB1               <---------YAB1                                    <---------ATHB51               <---------ATHB12                                  <---------YAB1                 <----        --------->ZAT18                                    <---------YAB1                     -------        <---------ZAT18                                    ----------->GT1        --------->ANAC58     <------MYB46(1)<---------ARR11(3)                   --------->YAB1<---------YAB1     -----------     <------MYB83  <---------ICU4               --------->ATHB12 --------->ICU4   --------->ANAC58 -------->ATHB12<---------ICU4              <---------WRKY18(1)--------->YAB1     ----------->GT1 --------YAB1--------->YAB1    ----------->GT1<---------WOX13(1) <---------AHL20(2) --------->AHL20(2)   tatgatttggttcactaatcattatctctgaacttgtgaaattgtttgactgatttgaatcatgttaataattgtgtttgactcaagtaaatttgttaat  12681600                            <---------TGA1a                            <---------ANAC55(2)                         --------->ARR14(2)                        <------ZmHOX2a(1)                       --------->ANAC58                       --------->ANAC46                       --------->ANAC58          <---------ANAC58  <---------O2         <---------WOX13(1) -----WOX13(1)----------->GT1   ----------->GT1 <------------CBF   --------->ANAC46             <---- -->ATHB12<---------ANAC58  --------->O2       --------->ATHB12------>ZmHOX2a(1)           <--------- >GT1     <---------ANAC46  --------->TGA1a   <---------YAB1  --------->TOE2(3)      <-----------GT1-   tggtttacatttgcttgagtaaaacaggaaacgtgagtaaaacaaaacttgattgttttttaatcctaaacgaaaactttctacatttaactgaattgtt  12681700                                                               <------MYB46(1)                                                              <---------AtMYB61                                                              --------->MYB111(1)                                                              --------->MYB46(2)                <----                                                              --------->MYB59               ---------                                                         <---------TOE2(3)                  <--------                                                    --------->ARR14(2)              <---------ANAC58                                      ----------->GT1    <---------TOE1(3)          <---------ANAC46                                    *TSS            <---------ARR14(2)             <------NtERF2----- -------GT1                     <---------MYB59  --------->HSFB2a(2)             <---------DEAR3(1) ---CBF  <------------CBF     ------->TEIL       <---------HSFB2a(2)<---------ETT(2)<---------ANAC58 -------->ATHB12             <---------CCA1(2)  <---------LBD16<------MYB83     ------>ZmHOX2a(1)   actgatttgtatattgttccaacgtctatttgtatctaatttgttaattttctggatttgaggtttggtatcgacaatggtcctcggcgtgcaattgtag  12681800                                                                         <------MYB83                                                                         <------MYB46(1)                                                                       <---------ANAC46                                                                       <--------P                                                                     <---------MYB46(3)       --------->DAG2                                           <---------ZAT14    --------->YAB1                                              --------->ZAT14    --------->AHL20(2)                                    ------>ZmHOX2a(1)                         < -----At4g35610                                      --------->YAB1  --------->MYB55(2)          ---- >YAB1---------->DOF2                               <---------ATHB12 --------->ATHB12            <--- -REM1(1)     <----------DOF2                     --------->ANAC46  <---------AtMYB61           <---- ---->At4g35610                          ----------->RAV1(2)  --------->ANAC46                  <----   ctgcaataaaaagtcactttgatggtccatggttcaacatatcatctgttccccatcatcctatactccagtggttgggagacttcatagtaagtttgat  12681900                                                                         ------>NtERF2                               <---------YAB1                            <---------RAP2.6(3)                            --------->DOF5.7(2)                          --------->LBD16                            <---------MYB52(1)                          --------->ANAC46           <-------TEIL    --------->TOE2(3)                            --------->RAP2.6(2) ----------DOF2           --------->ANAC55(2)             <---------MYB46(3) <---------ATHB12     --- ----->ARR11(3)           <---------ANAC55(2)            --------------->AtSPL8             ------>ZmHOX2a(2) ------ARR11(3)          <---------TOE2(3)      --------->TOE2(3)      <---------LBD16     <------ZmHOX2a(2) -----CCA1(2)          --------->TOE2(2)        <---------MYB59        ---------->ID1     --------->ARR14(2) -----GLK1(1)--------->TOE2(3)<---------ARR11(3)--------->TOE1(3) <----------DOF2         <---------ARR14(2)   atcttttatcaaatacatcaaaaaacttacgttatctttctaatttgtaacctaaattgtttgttctccttttgccgcaatctttctattgggatccaat  12682000                                              <----------DOF2                                            ------>NtERF2                                --------->TOE1(3)                                            <------NtERF2                                --------->TOE2(3)                                           --------->ANAC46                     --------->LBD16                                           --------->ANAC58                    <---------HSFB2a(2)                                           --------->ANAC58                    --------->HSFB2a(2)                                         --------->ATERF1(1)               <----------DOF2                                        ------>NtERF2            <---------TOE2(3) <---------KAN4(2)                                      <---------ANAC58           <---------TOE1(3) ---------->TaMYB80                                      <---------ANAC58      ------>ZmHOX2a(2) <---------LBD16         <---------ANAC46            <---------At4g35610  --------->ARR11(3)  <---------ANAC46     <---------WOX13(1)              --------->At4g35610  <---------ARR11(3) <---------LBD16 ------>ATHB12                     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)   ==========================   tcatttgaatgatgtgtatcacctctggtatcatgtagttgctgcccgccttagagacatgatctctaaggctaaaactttcgggaataaacctgaatgg  12682100                    --------->GLK1(1)                    <---------GLK1(1)                    --------->CCA1(2)                                                             <--                   <---------ARR11(3)                                                             <--                   <---------ARR14(2)                                                             <--                   --------->ARR14(2)                                                             <--                  <------ZmHOX2a(1)             <---------At4g35610                            ------           <-------MYC3                        ------->TEIL                                    ------           ------->MYC3                     <---------REM1(1)                                 <------          <---------TGA1a            --------->ZAT14                                      ------>NtERF2          --------->O2               <---------ZAT14                                     <---------ETT(1)          <---------O2<-----------RAV1(1)--------->ICU4         --------->ANAC58         --------->DEAR3(1)      <------ZmHOX2a(1)              --------->ZAT18            --------->ANAC58         ----------->HVH21 ===================bZIP_DOF <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)               <---------ATHB12  <--   ataagtgaggacacatggcaggatatgttggagtattggagcactgatgaagctaagaagaagagcaagacagcctctcccaatcgactctccgaccgtg  12682200  Previous    Next  AGI:  At5g33395.1    Description:  transposable element gene. CACTA-like transposase family (Ptta/En/Spm), has a 7.1e-27 P-value blast match to At5g59620.1/14-257 CACTA-like transposase family (Ptta/En/Spm) (CACTA-element) (Arabidopsis thaliana) Range:  from: 12681736    to: 12683422    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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