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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
<------
ZmHOX2a(1)
<------
MYB83
--------->
ATHB12
<------
MYB46(1)
--------------->
AGL15
--------->
ATHB12
<---------
ICU4
<---------
ANAC58
<---------
YAB1
--------->
ICU4
<---------
ANAC58
--------->
ARR14(2)
--------->
YAB1
--------->
ANAC55(2)
<---------
ARR14(2)
--------->
GLK1(2)
--------->
GT1
<---------
AHL20(2)
<------
ZmHOX2a(1)
--------->
YAB1
->
HSFB2a(2)
<-----------
GT1
--------->
MYB52(1)
<---------
YAB1
----------
--
HSFB2a(2)
<----------
DOF2
<---------
YAB1
--------->
CCA1(2)
--------->
YAB1
------->
TEIL
acagaaataaaaattagttgtctcctttgttatttacttgattaggattaacagaggatatgatttggttcacattgatcataatctatgaacttgtgaa
12681300
<---------
ICU4
-------->
HAHB4
<--------
ATHB1
--------->
ATHB51
--------->
YAB1
<---------
YAB1
<---------
YAB1
<---------
AHL20(2)
--------->
AHL20(1)
--------->
AHL20(2)
--------->
YAB1
<---------
YAB1
<---------
ICU4
<--------
HAHB4
--------->
YAB1
<---------
WOX13(1)
<------
ZmHOX2a(2)
>>>>>>>>>
ARR2
--------->
AHL20(2)
--------->
ATHB12
<---------
ATHB51
<---------
YAB1
<---------
YAB1
<-
<---------
WRKY18(1)
--------->
YAB1
<---------
AHL20(2)
<---------
AHL20(2)
->
GT1
<---------
WOX13(1)
--------->
ICU4
--------->
ICU4
<---------
AHL20(2)
--
attgtttgactgatttggatcattataataattgtgtttttggtttttaagttgatgacataatcaatttgattgtttgttttttattaattgtgtctct
12681400
<---------
AHL20(2)
--------->
AHL20(2)
<------
ZmHOX2a(1)
<---------
AHL20(2)
--------->
ATHB12
--------->
WRKY18(1)
<---------
ANAC58
--------------->
AGL15
--------->
At5g28300
<---------
ICU4
--------->
ANAC55(2)
<--------
ZAP1
<---------
AHL20(2)
<---------
ANAC58
<-----------
HVH21
<---------
HSFB2a(2)
<---------
bZIP60(2)
<---------
ANAC58
----------->
GT1
--------->
HSFB2a(2)
<---------
ANAC58
<---------
AHL20(2)
-
--------
ZAT18
<---------
YAB1
--------->
YAB1
<-----------
GT1
--------->
MYB52(1)
------->
LBD16
<----------
DOF2
--------->
AHL20(2)
<----------
DOF2
<---------
YAB1
<-
gcgcggtcaaaaatttttttttatgtctttggtttttatagaacataaataaaaatgacttgtctgctttgttatttacttgattaggattaacagaaaa
12681500
-------->
HAHB4
--------->
ATHB51
--------->
YAB1
<---------
ICU4
<--------
HAHB4
<--------
ATHB1
--------->
ICU4
--------->
YAB1
<---------
YAB1
<---------
ATHB51
<---------
ATHB12
<---------
YAB1
<----
--------->
ZAT18
<---------
YAB1
-------
<---------
ZAT18
----------->
GT1
--------->
ANAC58
<------
MYB46(1)
<---------
ARR11(3)
--------->
YAB1
<---------
YAB1
-----------
<------
MYB83
<---------
ICU4
--------->
ATHB12
--------->
ICU4
--------->
ANAC58
-------->
ATHB12
<---------
ICU4
<---------
WRKY18(1)
--------->
YAB1
----------->
GT1
--------
YAB1
--------->
YAB1
----------->
GT1
<---------
WOX13(1)
<---------
AHL20(2)
--------->
AHL20(2)
tatgatttggttcactaatcattatctctgaacttgtgaaattgtttgactgatttgaatcatgttaataattgtgtttgactcaagtaaatttgttaat
12681600
<---------
TGA1a
<---------
ANAC55(2)
--------->
ARR14(2)
<------
ZmHOX2a(1)
--------->
ANAC58
--------->
ANAC46
--------->
ANAC58
<---------
ANAC58
<---------
O2
<---------
WOX13(1)
-----
WOX13(1)
----------->
GT1
----------->
GT1
<------------
CBF
--------->
ANAC46
<----
-->
ATHB12
<---------
ANAC58
--------->
O2
--------->
ATHB12
------>
ZmHOX2a(1)
<---------
>
GT1
<---------
ANAC46
--------->
TGA1a
<---------
YAB1
--------->
TOE2(3)
<-----------
GT1
-
tggtttacatttgcttgagtaaaacaggaaacgtgagtaaaacaaaacttgattgttttttaatcctaaacgaaaactttctacatttaactgaattgtt
12681700
<------
MYB46(1)
<---------
AtMYB61
--------->
MYB111(1)
--------->
MYB46(2)
<----
--------->
MYB59
---------
<---------
TOE2(3)
<--------
--------->
ARR14(2)
<---------
ANAC58
----------->
GT1
<---------
TOE1(3)
<---------
ANAC46
*
TSS
<---------
ARR14(2)
<------
NtERF2
-----
-------
GT1
<---------
MYB59
--------->
HSFB2a(2)
<---------
DEAR3(1)
---
CBF
<------------
CBF
------->
TEIL
<---------
HSFB2a(2)
<---------
ETT(2)
<---------
ANAC58
-------->
ATHB12
<---------
CCA1(2)
<---------
LBD16
<------
MYB83
------>
ZmHOX2a(1)
actgatttgtatattgttccaacgtctatttgtat
ctaatttgttaattttctggatttgaggtttggtatcgacaatggtcctcggcgtgcaattgtag
12681800
<------
MYB83
<------
MYB46(1)
<---------
ANAC46
<--------
P
<---------
MYB46(3)
--------->
DAG2
<---------
ZAT14
--------->
YAB1
--------->
ZAT14
--------->
AHL20(2)
------>
ZmHOX2a(1)
<
-----
At4g35610
--------->
YAB1
--------->
MYB55(2)
----
>
YAB1
---------->
DOF2
<---------
ATHB12
--------->
ATHB12
<---
-
REM1(1)
<----------
DOF2
--------->
ANAC46
<---------
AtMYB61
<----
---->
At4g35610
----------->
RAV1(2)
--------->
ANAC46
<----
ctgcaataaaaagtcactttgatggtccatggttcaacatatcatctgttccccatcatcctatactccagtggttgggagacttcatagtaagtttgat
12681900
------>
NtERF2
<---------
YAB1
<---------
RAP2.6(3)
--------->
DOF5.7(2)
--------->
LBD16
<---------
MYB52(1)
--------->
ANAC46
<-------
TEIL
--------->
TOE2(3)
--------->
RAP2.6(2)
----------
DOF2
--------->
ANAC55(2)
<---------
MYB46(3)
<---------
ATHB12
---
----->
ARR11(3)
<---------
ANAC55(2)
--------------->
AtSPL8
------>
ZmHOX2a(2)
------
ARR11(3)
<---------
TOE2(3)
--------->
TOE2(3)
<---------
LBD16
<------
ZmHOX2a(2)
-----
CCA1(2)
--------->
TOE2(2)
<---------
MYB59
---------->
ID1
--------->
ARR14(2)
-----
GLK1(1)
--------->
TOE2(3)
<---------
ARR11(3)
--------->
TOE1(3)
<----------
DOF2
<---------
ARR14(2)
atcttttatcaaatacatcaaaaaacttacgttatctttctaatttgtaacctaaattgtttgttctccttttgccgcaatctttctattgggatccaat
12682000
<----------
DOF2
------>
NtERF2
--------->
TOE1(3)
<------
NtERF2
--------->
TOE2(3)
--------->
ANAC46
--------->
LBD16
--------->
ANAC58
<---------
HSFB2a(2)
--------->
ANAC58
--------->
HSFB2a(2)
--------->
ATERF1(1)
<----------
DOF2
------>
NtERF2
<---------
TOE2(3)
<---------
KAN4(2)
<---------
ANAC58
<---------
TOE1(3)
---------->
TaMYB80
<---------
ANAC58
------>
ZmHOX2a(2)
<---------
LBD16
<---------
ANAC46
<---------
At4g35610
--------->
ARR11(3)
<---------
ANAC46
<---------
WOX13(1)
--------->
At4g35610
<---------
ARR11(3)
<---------
LBD16
------>
ATHB12
<xxxxxxxxxxxxxxxxxxxxxxx
smallRNA(se3)
==========================
tcatttgaatgatgtgtatcacctctggtatcatgtagttgctgcccgccttagagacatgatctctaaggctaaaactttcgggaataaacctgaatgg
12682100
--------->
GLK1(1)
<---------
GLK1(1)
--------->
CCA1(2)
<--
<---------
ARR11(3)
<--
<---------
ARR14(2)
<--
--------->
ARR14(2)
<--
<------
ZmHOX2a(1)
<---------
At4g35610
------
<-------
MYC3
------->
TEIL
------
------->
MYC3
<---------
REM1(1)
<------
<---------
TGA1a
--------->
ZAT14
------>
NtERF2
--------->
O2
<---------
ZAT14
<---------
ETT(1)
<---------
O2
<-----------
RAV1(1)
--------->
ICU4
--------->
ANAC58
--------->
DEAR3(1)
<------
ZmHOX2a(1)
--------->
ZAT18
--------->
ANAC58
----------->
HVH21
===================
bZIP_DOF
<xxxxxxxxxxxxxxxxxxxxxx
smallRNA(se3)
<---------
ATHB12
<--
ataagtgaggacacatggcaggatatgttggagtattggagcactgatgaagctaagaagaagagcaagacagcctctcccaatcgactctccgaccgtg
12682200
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AGI:
At5g33395.1
Description:
transposable element gene. CACTA-like transposase family (Ptta/En/Spm), has a 7.1e-27 P-value blast match to At5g59620.1/14-257 CACTA-like transposase family (Ptta/En/Spm) (CACTA-element) (Arabidopsis thaliana)
Range:
from: 12681736
to: 12683422
Orientation: Forward
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.