Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100          --------->ALFIN1      <---------ANAC58      <---------O2                               <---------AHL20(1)      <---------TGA1a                            --------->AHL20(2)      --------->ANAC55(2)                        <---------AHL20(2)      <---------ANAC55(1)                        --------->AHL20(1)      --------->O2                               --------->ARR11(3)      <---------ANAC58                     ----------->GT1      <---------bZIP60(2)                  --------->YAB1      <---------ANAC46                 <---------AHL20(2)   ----------->HVH21               <---------AHL20(2)                       <---------TOE2(2) <----------DOF2                  <---------AHL20(2)                        <---------TOE1(2) ->ARR11(3)                       --------->AHL20(2)           <-----------GT1 -CCA1(2)  <---------ANAC46  <---------ATHB12    <---------ARR11(3)        ------>ZmHOX2a(1)     ----   agactttgacgtgttgtgctatttgaaacaaatgaataaaatttatagtaatatattcacctatataactgtttatcctatgtttttcaaaaactaatgc  8541400                        <---------ICU4              --------->ANAC58          >>>>>>>>>>WRKY38                      <---------YAB1           ----------->HVH21              >>>>>>>>>>WRKY43                      <---------TOE2(3)      --------->At4g35610              >>>>>>>>>>WRKY26         <---------HSFB2a(2)                 <---------At4g35610  <---------AtLEC2         <--------- <---------YAB1    <---------WOX13(1) <----------DOF2     <---------AHL20(2) --------->WRKY38(1) --->TEIL--------->HSFB2a(2)     <---------MYB59    --------->ANAC58         --------->WRKY12   attttcattttctgtaacctgattaatattgatgaactaactttggcagatgacaagcattttttttttcatgaaacatttgaccaaaactcgcttcaat  8541500                          --------->YAB1          <-----------TGA1                         <---------YAB1        <-----------GT1                    ------>MYB83            --------->ARR11(3)                    ------>MYB46(1)         --------->AHL20(1)                  --------->AtMYB61         <---------AHL20(1)                                 <-----                  <---------MYB111(2)       <---------ARR11(3)                                 <-----                  <---------MYB46(2)      <---------ARR11(3)             <---------YAB1    ------->MYC3                 --------->ANAC46         <---------AHL20(1)             --------->ICU4    <-------MYC3                 --------->ANAC58         --------->AHL20(1)   --------->AtMYB61          --------->ANAC46                 --------->ANAC58     <---------MYB59       --------->ANAC46              <---------O2 -DOF2     <---------ATHB12     --------->WOX13(1)<-----------HVH21  <---------ARR11(3) <---------ALFIN1   tgttttatatcaaatcaacaccaaactatgataccaattaccaaaatattttcgtcacttcaacaccacaagaccataattcaagaatcaacacgttgct  8541600                                                                                                  <--                                                                                                  <--                                                                                                 <---                                                                                                 ----                                                                                                 <---                                                                                                 ----                                                                                       --------->TGA1a                                                                                       --------->bZIP60(2)                                                                                       --------->O2                                                                                       --------->ANAC58                                                             <---------YAB1            <---------O2                                                             --------->ICU4            <---------TGA1a                                                        <---------MYB46(3)             <---------bZIP60(1)                                                        ----------->GT1                --------->bZIP60(1)                                                      <---------ANAC58                 ==============                                                      <---------ANAC58                 ==============      --------->AHL20(2)                              <---------ANAC46                 --------->ANAC46      <---------AHL20(2)                         <---------ICU4                        <---------ANAC55(2)     --------->AHL20(2)                          --------->ATHB12                      --------->ANAC55(2)     <---------AHL20(2)                         <---------YAB1                         --------->ANAC58 ----ANAC58                      <---------ATHB12-------->ATHB1            --------->GLK1(2) -------- ----ANAC58                <-----------GT1  --------->AHL20(2)   --------->YAB1    <-----------HVH21   tcgctaattttattcatcttgtagttatttcaccaatggtcccaaaaaaaatcattgctggttataattgtaaacaaattctatttgtcacgtcaaaaag  8541700  <---------AHL20(2)                                --------->ANAC46 -------CCA1(1)                                     --------->ANAC58 -------RVE1(1)                                     --------->ANAC58                   --------->ANAC58 ------AHL20(1)                                   <---------ALFIN1                --------->WOX13(1) ----->ARR11(3)                                 <---------ALFIN1                 *TSS  --------->ANAC58 ------ARR11(3)      ----------->ARR10      --------->At4g35610                 <---------ATHB12 ----->AHL20(1)   <-------GAMYB         <---------ARR11(3)                    ------>MYB46(1) =========================MYC_MYB       --------->ARR11(3)                    ------>MYB83 ===bZIP_DOF     ----------->GT1    <---------AHL20(2)                      --------->AtMYB61-------- -->DOF2         <---------MYB46(3)--------->AHL20(2)                    <----------ID1--------->ANAC46   atatttttttgtcttgatgtggttagaccctcttctatataatatcatctccacacacaactctcttctcaaaaaacaccaaatcattcaagaaaccaaa  8541800                                 --------->ALFIN1                                                  --                               --------->ALFIN1                                                    <-                             <---------ANAC58                                                   -----                             <---------TGA1a                                                <--------                             <---------ANAC46                                            --------->ANAC46                             <---------ANAC58                                            <---------ETT(1)                   <------ZmHOX2a(2)                                                    --------->DEAR3(2)                  <---------ARR11(3)                                                    ------>ZmHOX2a(2)        ==================HOX2a_HOX2a                                                  <------ZmHOX2a(2)        <------ZmHOX2a(1) >>>>>>>GRF7                                                 <---------ARR14(2)   =======================HOX2a_HOX2a                                                 --------->ARR14(2)   <------ZmHOX2a(1)   <-----------HVH21            <---------ZAT6                   <------ZmHOX2a(1) <---------TOE2(3)--------->ARR11(3)      --------->HSFB2a(2)               -------->P<---------ARR11(3) ->AtMYB61  >>>>>>>>>TBF1<-----------RAV1(2) --------->MYB52(1)         --------->TOE1(3)----------->HVH21   actaaggagaggaagaagaagatcatgtcaggcgtgtgggtcttcaagaacggagtgataagacttgtggagaaccctaaccagtcaggatccgacacac  8541900                                                                             <---------GLK1(2)                                                                           --------->LBD16                                                                        ------>ZmHOX2a(1)                                                                     <------ZmHOX2a(2)                                                                    --------->ARR11(3)                                                                    <---------ARR14(3)                                                                    <---------ARR14(2)                              <-----------RAV1(2)                   <---------GLK1(2)                            ----------->RAV1(1)                     --------->ARR14(2)                            >>>>>>>>>>DREB1A                        <---------ARR11(3)                            >>>>>>>>>>DREB2A                        --------->AGP1                           --------->At1g77200                      --------->ARR14(3)                           <---------ETT(1)                        --------->GLK1(1) ------->ARR14(2)         --------->DEAR3(2)   <---------At4g35610 <---------GLK1(1)              <-- --------ARR14(2)        <---------At5g28300   --------->At4g35610----------->ARR10           <------ ---->ANAC46   <---------AtMYB61 <------ZmHOX2a(1)    --------->ANAC46------>ZmHOX2a(2)       ------- -ALFIN1---------->DOF2 <-----------GT1--------->ALFIN1         <---------At4g35610         ---------   agaaccgaaggaaagtgatggtctatttaccgacaggagaagtggtctcatcttactcgacgctcgagcagatcctccagagtcttggatgggagagata  8542000                   ===============================HOX2a_HOX2a                  ================================HOX2a_HOX2a                  <------ZmHOX2a(2)                 <---------ARR14(2)                 --------->ARR14(2)                 <---------ARR11(3)                 --------->ARR11(3)           <------NtERF2          ----------->RAV1(1)          ------>NtERF2         ----------->HVH21        --------->ATERF1(1)        <------NtERF2        --------->RAP2.3(1)        --------->RRTF1(1)       <---------ATERF1(1)       <---------RAP2.3(1)       <---------RAP2.6(1)       <---------ORA47(2)       <---------ERF1       <---------DEAR4(2)       <---------RRTF1(1)       ------>NtERF2      <---------RAP2.3(3)      --------->DEAR3(1)      <---------RAP2.3(2)      <---------DEAR3(1)      <---------ATERF1(2)      --------->ATERF1(2)      <---------ANAC46     --------->At4g35610     <---------At4g35610     <---------ABI4(1)     <------NtERF2--------->GLK1(1)     --------->ATERF1(1)     --------->RAP2.3(1)     --------->DEAR4(2)     --------->DREB2C(1)    <---------RAP2.6(1)    <---------RRTF1(1)    <---------ORA47(2)    ------>NtERF2--------->ARR14(3)    <---------RAP2.3(1)    <---------DEAR4(2)    <---------ERF1<---------GLK1(1)    <---------ATERF1(1)   <---------RAP2.3(3)   <---------DREB2C(2)   <---------RRTF1(2)   <---------RRTF1(3)   <---------RAP2.3(2)   <---------ANAC46------>ZmHOX2a(2)   <---------DEAR3(1)   --------->ATERF1(2)                            <---------ARR11(3)   <---------RAP2.6(2) ====================================HOX2a_HOX2a   <---------ATERF1(2) ------>ZmHOX2a(1)   ------>ZmHOX2a(1)  <---------LBD16<-----------ARR10         ================HOX2a_HOX2a --------DOF2    --------->AGP1      --------->ANAC58          ------>NtERF2                     ---- ---ARR11(3)     <---------AGP1      --------->ANAC58       <---------ANAC58    ------>MYB46(1)  <--- -->ARR11(3)    <---------CCA1(2)<---------MYB52(2)         <---------ANAC58    ------>MYB83     <--- -->ARR10--------->DEAR3(1)      --------->MYB46(3) ------>ZmHOX2a(2)      <-----------GT1  <--------   ctttggcggcggcgacacagatctcctccaattccacaaacgctcctccattgatctcatttccctgcctagagatttcaccaaattcaactccgtttac  8542100                                                                                <---------ZAT14                                                                           --------->ALFIN1                                                                           <---------ANAC58                                                                           <---------ANAC58                                                                         <---------ANAC58                                                                         <---------ANAC46                                                                         <---------ANAC58                                                                       <------MYB46(1)                                                                       <------MYB83                                                                    <-------GAMYB                  <-                                                                   --------->ALFIN1         <--------                                                                 <---------ANAC58         <---------MYB52(1)                                                                 <---------ANAC58         <-------GAMYB                                    <-----------HVH21            <---------ANAC46 <---------ANAC46 <- ----------->AtSPL8        <-----------GT1                     <---------ANAC46 <-------GAMYB    ---- ------------AtSPL8        <---------AHL20(2)               <----------DOF2<---------ANAC46<---------MYB52(1) ------------AtSPL3     <---------ICU4               <---------GLK1(2)<---------AtMYB61  <------MYB83 -MYB52(1)           --------->TOE2(3)             <---------ATHB12<-----------RAV1(1)   <------MYB46(1)   atgtacgatatcgtcgtcaagaaccctaattacttccatgtccgagactcccattgattcttcttttgtgtgttggtgtgtgtgttgtgttcggttgttt  8542200                                        <---------AtLEC2                                       <-------TEIL                                     ------->PIF4                                     <-------PIF4                                     <-------MYC3                                 --------->ICU4                <------MYB46(1)      <-------PIF5                            <---------ANAC58                <------MYB83         ------->MYC3                            <---------ANAC55(2)            <-------GAMYB            ------->MYC4                            <---------ANAC46           --------->MYB52(2)        ------->PIF5                            --------->ANAC55(2)           <-----------RAV1(1)       ------->MYC2                            --------->ANAC58           <---------MYB46(3)        <-------MYC2                            --------->ANAC58        ------------>MYB.PH3(2)   <---------ANAC46                           <---------ANAC55(1) --------AHL20(2)           <---------YAB1    <---------AHL20(2)             ----------->GT1 -MYB46(3) --------->MYB55(2)     <---------ANAC58                           --------->ANAC55(1) --------YAB1   <---------ANAC46  <---------ANAC58                           <---------ANAC58  ------ ----->YAB1--------->MYB111(2)    <---------AtLEC2                      <---------ZAT6       <-------   tataatttagagtttgttgggttttgttttatagttgcatgtgcatgttttatttgttttggacgttggaagttgtgttacgtaattctggtttgatgaa  8542300  Previous    Next  AGI:  At5g24860.1    Description:  FPF1 (FLOWERING PROMOTING FACTOR 1). similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G10625.1); similar to FPF1 protein [Sinapis alba] (GB:CAA72716.1) Range:  from: 8541781    to: 8542452    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version