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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
--------->
ALFIN1
<---------
ANAC55(1)
--------->
ANAC55(2)
<---------
AHL20(1)
<---------
ANAC58
--------->
AHL20(2)
<---------
ANAC58
<---------
AHL20(2)
<---------
ANAC46
--------->
AHL20(1)
--------->
O2
<---------
ARR11(3)
<---------
bZIP60(2)
----------->
GT1
<---------
TGA1a
--------->
YAB1
<---------
O2
<---------
AHL20(2)
----------->
HVH21
<---------
AHL20(2)
<---------
TOE2(2)
<----------
DOF2
<---------
AHL20(2)
<---------
TOE1(2)
->
ARR11(3)
--------->
AHL20(2)
<-----------
GT1
-
CCA1(2)
<---------
ANAC46
<---------
ATHB12
--------->
ARR11(3)
------>
ZmHOX2a(1)
----
agactttgacgtgttgtgctatttgaaacaaatgaataaaatttatagtaatatattcacctatataactgtttatcctatgtttttcaaaaactaatgc
8541400
<---------
ICU4
--------->
ANAC58
>>>>>>>>>>
WRKY43
<---------
TOE2(3)
----------->
HVH21
>>>>>>>>>>
WRKY38
<---------
YAB1
<---------
At4g35610
>>>>>>>>>>
WRKY26
<---------
HSFB2a(2)
--------->
At4g35610
<---------
AtLEC2
<---------
<---------
YAB1
<---------
WOX13(1)
<----------
DOF2
<---------
AHL20(2)
--------->
WRKY38(1)
--->
TEIL
--------->
HSFB2a(2)
<---------
MYB59
--------->
ANAC58
--------->
WRKY12
attttcattttctgtaacctgattaatattgatgaactaactttggcagatgacaagcattttttttttcatgaaacatttgaccaaaactcgcttcaat
8541500
--------->
YAB1
<-----------
HVH21
<---------
YAB1
<-----------
GT1
------>
MYB46(1)
<---------
ARR11(3)
------>
MYB83
--------->
ARR11(3)
--------->
AtMYB61
<---------
AHL20(1)
<-----
<---------
MYB46(2)
--------->
AHL20(1)
<-----
<---------
MYB111(2)
<---------
ARR11(3)
<---------
YAB1
<-------
MYC3
--------->
ANAC46
--------->
AHL20(1)
--------->
ICU4
------->
MYC3
--------->
ANAC58
<---------
AHL20(1)
--------->
AtMYB61
<---------
O2
--------->
ANAC58
<---------
MYB59
--------->
ANAC46
--------->
ANAC46
-
DOF2
<---------
ATHB12
--------->
WOX13(1)
<-----------
TGA1
<---------
ARR11(3)
<---------
ALFIN1
tgttttatatcaaatcaacaccaaactatgataccaattaccaaaatattttcgtcacttcaacaccacaagaccataattcaagaatcaacacgttgct
8541600
<--
<--
<---
----
<---
----
--------->
TGA1a
--------->
bZIP60(2)
--------->
O2
--------->
ANAC58
--------->
ICU4
<---------
O2
<---------
YAB1
<---------
TGA1a
<---------
MYB46(3)
<---------
bZIP60(1)
----------->
GT1
--------->
bZIP60(1)
<---------
ANAC46
==============
<---------
ANAC58
--------->
ANAC46
--------->
AHL20(2)
<---------
ANAC58
==============
<---------
AHL20(2)
<---------
ICU4
--------->
ANAC58
--------->
AHL20(2)
--------->
ATHB12
<---------
ANAC55(2)
<---------
AHL20(2)
<---------
YAB1
--------->
ANAC55(2)
----
ANAC58
<---------
ATHB12
-------->
ATHB1
--------->
GLK1(2)
--------
----
ANAC58
<-----------
GT1
--------->
AHL20(2)
--------->
YAB1
<-----------
HVH21
tcgctaattttattcatcttgtagttatttcaccaatggtcccaaaaaaaatcattgctggttataattgtaaacaaattctatttgtcacgtcaaaaag
8541700
<---------
AHL20(2)
--------->
ANAC46
-------
CCA1(1)
--------->
ANAC58
-------
RVE1(1)
--------->
ANAC58
--------->
ANAC58
------
AHL20(1)
<---------
ALFIN1
--------->
WOX13(1)
----->
ARR11(3)
<---------
ALFIN1
*
TSS
--------->
ANAC58
------
ARR11(3)
----------->
ARR10
--------->
At4g35610
<---------
ATHB12
----->
AHL20(1)
<-------
GAMYB
<---------
ARR11(3)
------>
MYB46(1)
=========================
MYC_MYB
--------->
ARR11(3)
------>
MYB83
===
bZIP_DOF
----------->
GT1
<---------
AHL20(2)
--------->
AtMYB61
--------
-->
DOF2
<---------
MYB46(3)
--------->
AHL20(2)
<----------
ID1
--------->
ANAC46
atatttttttgtcttgatgtggttagaccctcttctatataatatcatctccacacacaactctcttctcaaaaaacacc
aaatcattcaagaaaccaaa
8541800
--------->
ALFIN1
--
--------->
ALFIN1
<-
<---------
ANAC58
-----
<---------
TGA1a
<--------
<---------
ANAC46
--------->
ANAC46
<---------
ANAC58
<---------
ETT(1)
<------
ZmHOX2a(2)
--------->
DEAR3(2)
<---------
ARR11(3)
------>
ZmHOX2a(2)
==================
HOX2a_HOX2a
<------
ZmHOX2a(2)
<------
ZmHOX2a(1)
>>>>>>>
GRF7
<---------
ARR14(2)
=======================
HOX2a_HOX2a
--------->
ARR14(2)
<------
ZmHOX2a(1)
<-----------
HVH21
<---------
ZAT6
<------
ZmHOX2a(1)
<---------
TOE2(3)
--------->
ARR11(3)
--------->
HSFB2a(2)
-------->
P
<---------
ARR11(3)
->
AtMYB61
>>>>>>>>>
TBF1
<-----------
RAV1(2)
--------->
MYB52(1)
--------->
TOE1(3)
----------->
HVH21
actaaggagaggaagaagaagatc
atgtcaggcgtgtgggtcttcaagaacggagtgataagacttgtggagaaccctaaccagtcaggatccgacacac
8541900
<---------
GLK1(2)
--------->
LBD16
------>
ZmHOX2a(1)
<------
ZmHOX2a(2)
--------->
ARR11(3)
<---------
ARR14(3)
<---------
ARR14(2)
<-----------
RAV1(2)
<---------
GLK1(2)
----------->
RAV1(1)
--------->
ARR14(2)
>>>>>>>>>>
DREB1A
<---------
ARR11(3)
>>>>>>>>>>
DREB2A
--------->
AGP1
--------->
At1g77200
--------->
ARR14(3)
<---------
ETT(1)
--------->
GLK1(1)
------->
ARR14(2)
--------->
DEAR3(2)
<---------
At4g35610
<---------
GLK1(1)
<--
--------
ARR14(2)
<---------
At5g28300
--------->
At4g35610
----------->
ARR10
<------
---->
ANAC46
<---------
AtMYB61
<------
ZmHOX2a(1)
--------->
ANAC46
------>
ZmHOX2a(2)
-------
-
ALFIN1
---------->
DOF2
<-----------
GT1
--------->
ALFIN1
<---------
At4g35610
---------
agaaccgaaggaaagtgatggtctatttaccgacaggagaagtggtctcatcttactcgacgctcgagcagatcctccagagtcttggatgggagagata
8542000
===============================
HOX2a_HOX2a
================================
HOX2a_HOX2a
<------
ZmHOX2a(2)
<---------
ARR14(2)
--------->
ARR14(2)
<---------
ARR11(3)
--------->
ARR11(3)
<------
NtERF2
----------->
RAV1(1)
------>
NtERF2
----------->
HVH21
--------->
ATERF1(1)
<------
NtERF2
--------->
RAP2.3(1)
--------->
RRTF1(1)
<---------
ATERF1(1)
<---------
RAP2.3(1)
<---------
RAP2.6(1)
<---------
ORA47(2)
<---------
ERF1
<---------
DEAR4(2)
<---------
RRTF1(1)
------>
NtERF2
<---------
RAP2.3(3)
--------->
DEAR3(1)
<---------
RAP2.3(2)
<---------
DEAR3(1)
<---------
ATERF1(2)
--------->
ATERF1(2)
<---------
ANAC46
--------->
At4g35610
<---------
At4g35610
<---------
ABI4(1)
<------
NtERF2
--------->
GLK1(1)
--------->
ATERF1(1)
--------->
RAP2.3(1)
--------->
DEAR4(2)
--------->
DREB2C(1)
<---------
RAP2.6(1)
<---------
RRTF1(1)
<---------
ORA47(2)
------>
NtERF2
--------->
ARR14(3)
<---------
RAP2.3(1)
<---------
DEAR4(2)
<---------
ERF1
<---------
GLK1(1)
<---------
ATERF1(1)
<---------
RAP2.3(3)
<---------
DREB2C(2)
<---------
RRTF1(2)
<---------
RRTF1(3)
<---------
RAP2.3(2)
<---------
ANAC46
------>
ZmHOX2a(2)
<---------
DEAR3(1)
--------->
ATERF1(2)
<---------
ARR11(3)
<---------
RAP2.6(2)
====================================
HOX2a_HOX2a
<---------
ATERF1(2)
------>
ZmHOX2a(1)
------>
ZmHOX2a(1)
<---------
LBD16
<-----------
ARR10
================
HOX2a_HOX2a
--------
DOF2
--------->
AGP1
--------->
ANAC58
------>
NtERF2
----
---
ARR11(3)
<---------
AGP1
--------->
ANAC58
<---------
ANAC58
------>
MYB46(1)
<---
-->
ARR11(3)
<---------
CCA1(2)
<---------
MYB52(2)
<---------
ANAC58
------>
MYB83
<---
-->
ARR10
--------->
DEAR3(1)
--------->
MYB46(3)
------>
ZmHOX2a(2)
<-----------
GT1
<--------
ctttggcggcggcgacacagatctcctccaattccacaaacgctcctccattgatctcatttccctgcctagagatttcaccaaattcaactccgtttac
8542100
<-------
GAMYB
--------->
ALFIN1
<---------
ANAC58
<---------
ANAC58
<---------
ANAC58
<---------
ANAC46
<---------
ANAC58
<------
MYB46(1)
<------
MYB83
<-------
GAMYB
<-
--------->
ALFIN1
<--------
<---------
ANAC58
<---------
MYB52(1)
<---------
ANAC58
<-------
GAMYB
<-----------
HVH21
<---------
ANAC46
<---------
ANAC46
<-
----------->
AtSPL8
<-----------
GT1
<---------
ANAC46
<---------
ZAT14
----
------------
AtSPL8
<---------
AHL20(2)
<----------
DOF2
<---------
ANAC46
<---------
MYB52(1)
------------
AtSPL3
<---------
ICU4
<---------
GLK1(2)
<---------
AtMYB61
<------
MYB46(1)
-
MYB52(1)
--------->
TOE2(3)
<---------
ATHB12
<-----------
RAV1(1)
<------
MYB83
atgtacgatatcgtcgtcaagaaccctaattacttccatgtccgagactcccattga
ttcttcttttgtgtgttggtgtgtgtgttgtgttcggttgttt
8542200
<---------
AtLEC2
<-------
TEIL
<-------
PIF4
------->
PIF4
<-------
MYC2
--------->
ICU4
<------
MYB46(1)
------->
MYC2
<---------
ANAC58
<---------
ANAC46
<-------
MYC3
--------->
ANAC55(2)
<-------
GAMYB
------->
PIF5
--------->
ANAC58
--------->
MYB55(2)
------->
MYC4
<---------
ANAC55(1)
<-----------
RAV1(1)
<-------
PIF5
<---------
ANAC58
--------->
MYB52(2)
------->
MYC3
<---------
ANAC55(2)
------------>
MYB.PH3(2)
<---------
ANAC46
<---------
ANAC46
--------
YAB1
<------
MYB83
<---------
ANAC58
--------->
ANAC58
-
MYB46(3)
<---------
MYB46(3)
<---------
AtLEC2
----------->
GT1
------
--------
AHL20(2)
<---------
YAB1
<---------
AHL20(2)
--------->
ANAC55(1)
----->
YAB1
--------->
MYB111(2)
<---------
ANAC58
<---------
ZAT6
<-------
tataatttagagtttgttgggttttgttttatagttgcatgtgcatgttttatttgttttggacgttggaagttgtgttacgtaattctggtttgatgaa
8542300
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AGI:
At5g24860.1
Description:
FPF1 (FLOWERING PROMOTING FACTOR 1). similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G10625.1); similar to FPF1 protein [Sinapis alba] (GB:CAA72716.1)
Range:
from: 8541781
to: 8542452
Orientation: Forward
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.