Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                   <---------MYB52(1)                    <---------ARR11(3)       <---------ALFIN1              <---------SPL7            <----------DOF2                  ----------->RAV1(1)          <---------ANAC46         <-----------GT1                <-----------GT1   ----------->GT1 <---------ANAC58         <---------AHL20(2)  <-------TEIL  ------->GAMYB---------->DOF2   <---------ANAC58   atgagcattattttctttacaagttatttgatacatgtaatgtaaccccacagttagagaaagtaacaaatatgtgtcgtacagttgttttgttctaaaa  7680900                                                                                                -----                                                                                              <------                                                                                           --------->WRKY18(1)                                                                                           <<<<<<<<<<WRKY38                                                                                           <<<<<<<<<<WRKY26                                                                                  ----------------->AG                                                                             --------->ATHB12 -------                      --------->YAB1                                        <---------YAB1 <<<<<<<<<<WRKY43                     <---------YAB1          ----------->HVH21   --------->YAB1   ----------------->AGL1               <---------YAB1            ---------->DOF2      ======================================MADS_MADS             --------->YAB1            --------->ANAC58       --------------->AGL15       <---------- ----------->RAV1(1) <---------TOE2(3) --------->ANAC58       <---------------AGL15  --------->ATHB12   tcgcaacaaaaacaatgaccattaacataattttggttcgaacgaaagtgacacagtagctcatctataatgggtatggtcattgcctcattggtcaagt  7681000                                         ------>ZmHOX2a(2)                                        <------ZmHOX2a(2)                       --------->MYB52(2)<-------TEIL                   <------MYB46(1)--------->ZAT2    <---------LBD16<------MYB83   <---------ZAT2                                  ---------->DOF2   ----------->RAV1(2) --------->ATHB12--------->ARR14(2)                       <---------AHL20(2) ---->YAB1         <---------MYB46(3)  <---------ARR14(2)                   --------->AHL20(2) ---ANAC55(2)      ----------->GT1<---------At4g35610                       <---------AHL20(2) -->ANAC55(2)  --------->ATHB12   --------->At4g35610                --------->ANAC58               < -HVH21     ---------->DOF2    --------->ATERF1(1)                   --------->ANAC58               <   atcatccctggcactaaagattggttaattggggtctgctggatccatattggacctattatctaatatgaacgaaaattatataaaagggcctccaaaa  7681100                                                                                                    -                                                                                                    -                                                                                                    <                                        <---------WRKY18(1)                                        --                                       --------->WRKY45                                  <------MYB83          ---------->DOF2            <----------DOF2                                     <------MYB46(1)   <---------DAG2                 <---------ALFIN1                                      --------->MYB59   <----------DOF2       <---------YAB1--------->WRKY12                                --------->ZAT14 -----------GT1          <-----------RAV1(1)       --------->HSFB2a(2)                <---------MYB52(1) ---------AHL20(2)   --------->AHL20(2)--------->WRKY38(1)<----------DOF2     <---------ICU4 --------   atttactttactaaaaggcccaatattatgttggcccgactttgaccatacttctaggctcttttttttttgtttggacatcatttcagttcggtctgac  7681200                                      ----------->GT1                                   ------>ZmHOX2a(1)                                         --------   <---------ANAC46               --------->TOE1(3)                                          <------NtERF2   --------->ANAC55(2)            --------->TOE2(3)                                          ------>NtERF2  <---------LBD16           <---------ATHB12                         <---------YAB1         --------- -------->WRKY12           ------>MYB46(1)                        <---------YAB1           --------->SPL7 -------->ARR14(2)         ------------>CBF                  --------->DAG2   <---------YAB1--------- ---------ARR14(2)         ------>MYB83                     ---------->DOF2  <---------AHL20(2) ------->DOF5.7(2)        ----------->RAV1(1)        --------->TOE1(2)       --------->AHL20(2) --->HVH21              --------->MYB46(3)           --------->TOE2(2)  <---------YAB1 <---------AtMYB61   cgtttacgggtttttttttcttccaaaccaacaattccttaagtaaaaaaaaaaacataagataaagtatcattcttattttaatagttttggtccgcca  7681300                                                                           <<<<<<<<<<<<<<<<<LFY --->RAV1(1)                 ---------->DOF2                               ----------->RAV1(1)     -- >ANAC58                    ------>ZmHOX2a(1)                           --------->RAP2.6(2)       <-- >ANAC58*TSS        <----------DOF2               ----------->GT1    --------->ANAC46          ------   gaggcataagcatacaaatattcttttctcctaaagttttaagaacagagcaaggttaaaaaaaaaaacacaagtcgcaacaatggagagagtgatgaac  7681400                                                                  <---------bZIP60(1)                                                                  <---------ANAC58                                                                  --------->bZIP60(1)                                                                  ----------->GT1                                                                  <---------ANAC58                                                         <-----------RAV1(2)                                                       <-----------HVH21                                                       <-----------TGA1                                                      <---------ANAC58                                 <---------ANAC58     --------->ANAC46                       <-------TEIL                                 <---------ANAC55(1)  <---------ANAC58                      <--------                                 --------->ANAC55(2)  --------->TGA2(1)                  <---------TOE1(2)                                 <---------ANAC46     <---------TGA2(1)                 --------->LBD16                                 <---------ANAC58     <---------ANAC55(2)              <---------TOE2(1)                              <---------MYB52(1)      <---------bZIP60(1)              <---------TOE1(1)                            <-----------RAV1(1)       --------->bZIP60(1)     --------->ANAC58    <----------ID1       --------->MYB52(1)   ------->GAMYB <------ZmHOX2a(1) --------->ANAC46   --------->DAG2       --------->MYB46(3)   --------->ANAC58     <---------ANAC46  --------->ARR14(2)  ---------->DOF2     --------->ANAC46<---------WOX13(1)--------->TGA2(2)     --------->ANAC58 ------->YAB1     ------>ZmHOX2a(2) --------->ATHB12  --------->ANAC55(2)    --------->SPL7 --------- -------YAB1----------->RAV1(2)  <---------ANAC55(2)<-----------GT1        <---------SPL7<---------TOE2(2) ->TEIL     ============================RAV  --------->ANAC58  --------->ALFIN1     <---------ARR14(2)   atcataaagccaaaacctgatcccaaacaactgttgcgtgattggcaacgcaaattacgtcaggagtgtcgtaacatcgaacgccaaatccgaggttctt  7681500                                                                                             --------                                                                                             <-------                                                                                             ------->TEIL                                                                                  --------->ATHB12   <-----------GT1   <---------DAG2                    <---------YAB1            --------->AHL20(2) -ARR14(2)           <----------DOF2     <---------TOE1(3)                       <---------AHL20(2)<- >ARR14(2)          <---------DAG2       <---------TOE2(3)<---------WOX13(1) <---------TOE2(3)     <-   ctattttacacatcttctctcgcctttttcttatggtcaatttagggttttcgaaatctaattgaattagatgctagtttagattaattggattgaatct  7681600                                                                                                  <--                                                                                                  <--                                                                                                  <--                                                               <------MYB46(1)                    <--                                                               <------MYB83                       <--        --------->ANAC58                        ------>ZmHOX2a(2)                                <---        --------->ANAC58                      --------->ARR14(2)                                 <---    ------>ZmHOX2a(2)      <-----------GT1    <---------ARR14(2) <---------ANAC46              <----- ->ARR14(2)        <---------ANAC58     <---------ARR14(2)   <---------WOX13(1)                <<<<<< --ARR14(2)        <---------ANAC46     --------->ARR14(2) --------->ATHB12                   <------ -------P     <---------ICU4            <---------GLK1(2) <---------YAB1    <-----------GT1   <------ --------WOX13(1)  <---------ANAC58  --------->YAB1   --------->ARR11(3)------->TEIL   --------->YAB1   ggttgatcgcacccaaaaattgcgagaatttactctgaatcagatttggatcggatgattttgattggtgtatgaatttttcgatttgatcatatgggtt  7681700 -------ANAC58 -------ANAC46 -------ANAC58 ----MYB46(1)                                                                            ---------->DOF2 ----MYB83                                             ----------->GT1              --------->ZAT2 ---MYB83                                       ---------->DOF2                     <---------At4g35610 ---MYB46(1)               <---------YAB1--------->GLK1(1)                     <---------TOE2(3) ---P------->TEIL    <---------TOE1(3)   --------->CCA1(2)                    ---------->DOF2      -- <<<MYB98            <---------TOE2(3)  --------->ARR11(3)                  <---------YAB1     <----- ---ANAC58          ---------->DOF2     --------->ARR14(2)           ---------->DOF2--------->At4g35610 ---ANAC58     --------->ICU4           <---------ARR14(2)   <---------------AtSPL8--------->GLK1(2)   gggtttgaatctatggaatttttaaagttttgattttgttcagatatacagaaagaagagagaaatgtacagaaagctattaaagaagctgcaaagagga  7681800  Previous    Next  AGI:  At5g22950.1    Description:  VPS24.1. similar to VPS24.2 [Arabidopsis thaliana] (TAIR:AT3G45000.1); similar to putative endosomal Vps protein complex subunit [Oryza sativa (japonica cultivar-group)] (GB:BAC45115.1); contains InterPro domain Snf7; (InterPro:IPR005024) Range:  from: 7681308    to: 7682906    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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