Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                              <--------                                                  --------->TOE1(3)                         <--------                       --------->ANAC58           --------->TOE1(2)                        <---------DEAR3(1)                       --------->ANAC58           --------->TOE2(3)      <------ZmHOX2a(1)<------NtERF2 ------MYB52(1)        --------->ANAC46 <---------At4g35610       ---------->DOF2         ------>NtERF2 ---GAMYB     <---------ANAC58          --------->At4g35610--------->At4g35610           --------->DEAR3(1) -ALFIN1      <---------ANAC58    <------ZmHOX2a(1)        <---------At4g35610         <---------LBD16   ttgccaagagagagaagcgtgactccagccattgtaggagacagcttcaaaaccttagataagctgtctaaagaaggacagaagtaactcgcggccgtgt  5904000                                <------NtERF2                               ----------->GT1                                     --------->GLK1(2)                              <---------ANAC46                                     <---------ARR14(3)                          <-----------RAV1(2)                                      --------->ARR11(3)  --------->ANAC46      -------->P                                       <-------TEIL --------->LBD16      --------->MYB46(3)                           --------->LBD16 <---------ARR14(2) -ANAC58            --------->ANAC46                        --------->ARR14(2)     <---------ARR11(3) -ANAC58          --------->MYB46(3)                        <---------ARR14(2)     --------->ARR14(3)   ctccgagcaagtagaacagaacaaacaaccaggcggataaaactagatggcccaaaacaggggattgtccgaagatgcagaagaaaatcttgagatagtc  5904100                                                                                          <----------                                                                                     <-----------RAV1(2)                                                                                 --------->LBD16                                                                                 --------->At4g35610                        <---------WOX13(1)                                       <---------At4g35610-                      --------->ATHB12                                           ----------->RAV1(2)-              ----------->RAV1(1)                                      <---------ANAC58--------->ZAT2              <---------ALFIN1                                         <---------ANAC46<---------At4g35610            <---------PCF2   <---------ARR11(3)                       <------NtERF2 <---------At4g35610           <---------TCP23   --------->ARR11(3)                     <---------DEAR3(1) --------->At4g35610           ----------->TCP11(1)------>ZmHOX2a(2)            <-----------HVH21 ------>ZmHOX2a(1)     -           <---------PCF5    --------->AGP1             <---------MYB46(3)<---------ARR14(2)       <-          <-----------TCP11(1)<------ZmHOX2a(2)        --------->ALFIN1<---------ANAC58<---------ZAT2  <-----------GT1    <---------YAB1                    <---------AtMYB61  --------->ARR14(2)    <----   tatgtaaccttgtgggccacattttgattgagatcttatgtaagaacacttggaacggtggtcgtcaaggctggcgagtcctccgctgcagctgtcactg  5904200      <------NtERF2     --------->LBD16     ------>NtERF2    --------->RRTF1(2)    --------->ATERF1(2)    --------->DREB2C(2)    --------->RAP2.6(2)    <---------ATERF1(2)    --------->DEAR3(1)    --------->RAP2.3(2)    --------->RAP2.3(3)            --------->LBD16   --------->ERF1                 <---------HSFB2a(2)   --------->RAP2.3(1)           =================HOX2a_HOX2a   <---------LBD16               ====================HOX2a_HOX2a   --------->ATERF1(1)           <---------LBD16  ------>NtERF2                  ------>ZmHOX2a(2)  <---------ATERF1(1)           <------ZmHOX2a(2)  --------->ABI4(1)             ==================HOX2a_HOX2a --------->DEAR3(1)             =====================HOX2a_HOX2a -HVH21 ---------->DOF2        --------->ARR14(2) -------->ATERF1(1)            <---------ARR14(2) -------->DEAR3(2)             ------->TEIL -------->MYB46(3)        <---------AtLEC2    <------ZmHOX2a(1)                           --------->ARR11(3) --------At5g28300 <---------TOE1(3)       <------ZmHOX2a(1)                 ---------->DOF2 -------HVH21      <---------TOE2(3)     --------->ALFIN1           ---------->DOF2       <---------ARR11(3)   tcaccgccggcaaaggaatttaaggtttggatggatccggagggaggaggagtttgtgaagcgaaatggagaaagatgagaaagatgaagaagatgttga  5904300                                <------ZmHOX2a(1)                            --------->ALFIN1            --------->ANAC58                          <---------ANAC46              --------->ANAC58          <---------ICU4<----                          <---------ANAC58          --------->ANAC58              *TSS   <---------ANAC46                          <---------TGA1a           --------->ANAC58              --------->YAB1<----                          <---------ANAC55(2)       --------->ANAC46             <---------ATHB12                          --------->O2          --------->AtLEC2                 <---------ATHB51                          --------->ANAC55(2) --------------->AGL15              --------->ICU4------                          <---------ANAC58    <---------------AGL15            --------->YAB1<-------      ---------->DOF2     <---------O2   <---------ANAC58                --------->ALFIN1--------->ALFIN1      ==============================bZIP_DOF ----------------->AGL1    <---------ANAC46<---------ANAC46 <------ZmHOX2a(1)        --------->TGA1a<---------ANAC58              <---------bZIP60(2) --------->ALFIN1   tgaggagagaaagagattgagagccgagacgtgaggagaagagacttgccattcaaggaagcaaatgggtatgaagtggaacaataatgaggtgtgttag  5904400                     <------------CBF               --------->YAB1            --------->YAB1            -------->HAHB4         --------->YAB1       --------->AHL20(2)                                                              <----------DOF2 --MYB46(1) <---------ICU4                              <------------CBF          <---------GLK1(2) --MYB83<---------YAB1                    <---------ANAC58                    ---------->DOF2 --->MYB59<---------AHL20(2)              <---------ANAC46          <---------LBD16--------->GLK1(2) --MYB52(1)--------->ICU4                 <---------ANAC58----------->GT1    --------->AHL20(2)    <-   gttttctgatataataatgagaaaattgtagtttttttttttttgtgtggaagttttgaattgttaatatttcggaaaataaaagattcctttttatttc  5904500                                                        <------MYB83                                                        ----------->GT1            <------MYB46(1)                             <------MYB46(1)            <------MYB83                               <---------AtMYB61   --------->ANAC58          <--------P                     <---------ARR11(3)                --------->ANAC58          --------->ALFIN1               --------->AHL20(1)                --------->ANAC46      <---------ANAC46                   <---------AHL20(2)          -------->ATHB1      --------->ALFIN1                   --------->ARR11(3)          --------->ATHB51    --------->ALFIN1                     --------->AHL20(2)          --------->AHL20(2)   --------->ARR14(2)                    <---------AHL20(1)         <---------ATHB12   <---------ARR14(2)              --------->ANAC46 <---------ANAC46<---------ATHB51 --------->LBD16                  <---------------------WRI1        --------->ICU4  <------ZmHOX2a(1) --------LBD16             <----------DOF2       --------->ALFIN1<---------AHL20(2)----------->GT1   atgcggatgtgggtaggggaaagtattgtctttttatgcgaaatatattaagtgggggaggttatattcaattattcacacaaggaggaaaaatcgaagt  5904600                                 --------->ATHB51                                 -------->ATHB1                                 --------->ATHB12                                <---------YAB1                              <---------------AGL15                              --------------->AGL15                             <-----------------AGL2          <---------------AGL15                             ================================================MADS_MADS                        <---------ARR11(3)      <---------ARR11(3)                        --------->ARR11(3)      --------->ARR11(3)                       <---------CCA1(2)        --------->ARR14(2)            ---------->DOF2  <-----------------AGL3 <-------TEIL  --------->DAG2--------->ARR11(3)          --------->ANAC55(2)              <---------ZAT6 ---------->DOF2<---------ARR11(3)        <-----------GT1    --------------->AGL15 <---------AHL20(2)   tgataaagtgtttttaaagaactctatatctactattattggttttacgagatattcatgttactacaatttgtatgtagtgtttttatttttctatggt  5904700                                                            <---------YAB1                                                   <-------MYC3                                                   ------->MYC3                                                   -------->ABF1                                                   <-------MYC2                                                   ------->MYC2                                                   ------->MYC4                                                   <-------MYC4                                                  <---------ANAC55(2)                                                  --------->ANAC46                                                  --------->ANAC55(2)                                                  <---------TGA1a                                                  --------->TGA1a                                                  --------->O2                                       --------->ANAC58    --------->ARR11(3)               <--------                                       --------->ANAC58    <---------ARR11(3)        <---------TOE2(3)                            <-----------HVH21     <---------O2                       <---------TOE1(3)                     <---------ZAT6    --------->AtLEC2  <---------YAB1  --------->YAB1<------ZmHOX2a(1)   ccaacttggagtccaattttctagtgtaatcgtcgcgaggcatgcaaatcacacgtgtcatgatatttgtgacaataacaaggagttgaggattaatgta  5904800                      <---------YAB1                <---------YAB1                            ----------->GT1              --------->YAB1                         <---------YAB1           ---------->DOF2             <---------YAB1                    ---------->DOF2               --------->YAB1           --------------->AGL15           <---------At4g35610              <---------YAB1     <-----------RAV1(1)                   --------->At4g35610      --------->YAB1   <---------ICU4----------->GT1  --------->DAG2 ----------->GT1    --------->TOE2(3) -TOE2(3)  <---------------AGL15 ---------->DOF2--------->DAG2      --------->TOE1(3)         <------   gttcataatgttgctattatagttaatattcgatgaaaagtagtcagcataaagtattaatagaaaaaaaccataactatcaaagtgagtgagattgtgt  5904900  Previous    Next  AGI:  At5g17860.1    Description:  CAX7 (CALCIUM EXCHANGER 7); calcium:sodium antiporter/ cation:cation antiporter. similar to cation exchanger, putative (CAX8) [Arabidopsis thaliana] (TAIR:AT5G17850.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO67491.1); contains InterPro domain Sodium/calcium exchanger membrane region; (InterPro:IPR004837) Range:  from: 5902396    to: 5904382    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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