Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                <---------At4g35610                                                              --------->At4g35610 -MYB46(1)                                      --------->ANAC58 -MYB83                       <---------ALFIN1  --------->ANAC46     <---------At4g35610 -->MYB59               --------->KAN4(2)       --------->ANAC58 ------>NtERF2 -->MYB46(2)          <-------TEIL     --------->AtLEC2   <---------ANAC58                <---------- -MYB52(1)      <---------ANAC58     <---------ANAC58     <---------ANAC46        --------->ARR11(3) -->AGL15       <---------ANAC58     <---------ANAC58     <---------ANAC58        <---------ARR11(3) ----AGL1       <---------ANAC46 <----------DOF2--------->ANAC55(2)  --------->At4g35610  <----------   taatagttttctgatgtttcttggttcattccccactttccttgcaattcaagtaacatggcttggctgccatcagacatataaggtctattcgtcatgt  4757600                             ----------->GT1                        <---------ANAC55(2)     <---------ANAC58   --------->ANAC58     <---------ANAC58   --------->ANAC55(1)    --------->ZAT18     --------->ANAC55(2)    <---------ZAT18     --------->ANAC58                                       <---------GLK1(1) -TGA1           <---------AHL20(2)   <-----------GT1            <---------DAG2--------->GLK1(1) -HVH21      <---------------AGL15   <-----------GT1             <----------DOF2   ctagattgcgcttgcctattttaagcacgtattgtgaaatttccctcttgacttccaagatggaaaactttttgactagagaaatcagttctgttcagtt  4757700                                                                             --------->ANAC46           --------->YAB1                                                    --------->ANAC58          <---------ATHB12                                           --------->LBD16         --------->ANAC58       --------->ZAT18                     <---------LBD16         --------->ANAC58       <---------ZAT18                     <---------ANAC46                -        --------->WOX13(1)      <---------ZAT14            <---------ANAC55(2)                 <-----       --------->MYB46(3)       --------->ZAT14            --------->ANAC55(2)              ---------  ----------->RAV1(1)       <---------ICU4          <---------At4g35610      --------->ANAC58  <-----   tgagccacaacaatcaacattctctcttaattagtccacttgttgtgcctagtctgctattaagtaagtgcctggaaacaaggaattgggagtataagaa  4757800                                 ---------->DOF2                              --------->ANAC58                         >>>>>>>>>>bZIP23                              --------->ANAC58                         <<<<<<<<<<bZIP23                          --------->ANAC58                             --------->ETT(2)                          --------->ANAC58                             <---------ETT(2)                        ---------->DOF2                     --------->CCA1(2)                     ----------->RAV1(1)                 <---------YAB1<<<<<<<<<<bZIP19 -------->TOE2(3) --------->ANAC46                     --------->YAB1  >>>>>>>>>>bZIP19        ------ ----GLK1(2)      --------->ANAC58             <---------ETT(2)       --------->DDF1         -------- >YAB1            --------->ANAC58           <-------GAMYB--------->YAB1                     <------- ----ICU4         --------->AtLEC2 <----------ID1     <---------AHL20(2)<---------DDF1    ------>ZmHOX2a(1)   tttcttaatattcgtttttcatgcaacaaagcaagtaaagacaagactgttgacatataatgatatgagaatgtcgacatagtttcttcatcctcccaca  4757900                                                                                            ---------                                                                                            <--------      <---------YAB1                                                              --------->ARR11(3) --->ANAC46                                         ------>ZmHOX2a(1)             <---------ARR11(3) --->RAV1(1)         <-----------ARR10  --------->ANAC46                   *TSS ----------->ARR10 --ALFIN1--------->CCA1(2)         ------->TEIL <-----------GT1       <------ZmHOX2a(1)     ---------   taatacatatgatataagtagcgaatcaaaccctatgcacatactccatttctcctctctcccttccctagaggaaatagagaagctcttcaagtatccg  4758000                              --------->ANAC55(2)                              <---------ANAC55(2)                             <---------LBD16                             <-------TEIL                            --------->CCA1(2)                            --------->ARR14(1)         --------->AHL20(2)                           <---------ARR14(2)       --------->YAB1                           --------->ARR11(1)      --------->ICU4                           --------->ARR14(2)      <---------YAB1                          --------->GLK1(1)        <---------ATHB12                         ----------->ARR10   <-------MYC3                        <------NtERF2        <-------MYC2                       --------->LBD16       ------->MYC3                          <-----------GT1        <---------AHL20(2)<---------GLK1(1)  ------->MYC2                   ---------->ID1 >GLK1(2)             <---------DEAR3(1)  <---------ANAC58               <-------TEIL<---------YAB1 -ARR14(2)            <---------ANAC46    <---------ANAC58            --------->At4g35610 >ARR14(2)           <---------LBD16      <---------ANAC46            <---------At4g35610   atgtttttgtttaatcaacaagaggcggagatacgggagaaattgcatgtgtaatcataaaatgtagatgttagcttcgtcgtttttactatagtttagt  4758100                 <-----------TGA1                                              --------->GLK1(2)               ---------->ID1            <-----------GT1                     --------->ICU4              <-----------GT1     --------->YAB1                      <---------ANAC46         <-----          <----------DOF2      <----------DOF2                 <---------AHL20(2)          <---------ARR11(3)     <<<<<<<<<TBF1 <---------ICU4 --------->TOE2(3)        <---------YAB1  --------->YAB1  --------->ARR11(3)   tctcttcttcttcttttttcgtcattacaatctctttcttaatttacttcttcttgatagtataattaagttgtttgtaataatctgtacaaagatgttg  4758200                                                                                  --------->HSFC1(1)                                                                                  <---------HSFC1(1)                                                                                  <---------HSFB2a(2)                                                                                  --------------->AGL15                                                                                  --------->HSFB2a(2)                                                                          --------->ZAT14         <---------AHL20(2)                                      <---------DAG2  <-----------------AGL1         --------->AHL20(2)                                      <----------DOF2 <-----------------AGL2   --------->YAB1                         <---------ANAC58      <---------DAG2<---------GLK1(2)  <---------YAB1                          <---------ANAC58   <-----------------AGL1            <----- ----ANAC46            ---------->DOF2   --------->MYB52(2) --------->PCF5<---------ZAT14      ------   tgttctcataaaaaattcaattttgtaaagaagctctacatgttccttgctctgtaaacatggtccccttttggactacagtttctcgaaatggctcatc  4758300                                 --------->RAP2.6(2)                                 ----------->RAV1(1)                                <----------ID1                              --------->ANAC58                              --------->ANAC46                              --------->ANAC58                                                   ----                            ---------->DOF2          --------->CCA1(2)                  <---------TOE1(3)                      --------->At4g35610           <---------ARR14(2)      <----------DOF2      ---- ----At4g35610    <---------ARR14(2)                --------->ARR11(3) <---------AtMYB61--------->DAG2 --->At4g35610    --------->ARR14(2)      ----------->GT1       ---------->DOF2         <---------TOE2(3)   agactcagagacgactctccaatctgcttcaaaagccacaaaacaggtaaaacagatatagagacacaaagtgatggtctttatttagataaggttagca  4758400                                         ------>ZmHOX2a(2)                                        <------ZmHOX2a(2)                                       <-----------ARR10             --------->WOX13(1)                                       --------->ARR11(3)          <---------ATHB12          --------->CCA1(2)            <---------ARR11(3)       --------->MYB46(3)         <---------ARR11(3)            <---------ARR14(2)      --------->ANAC58         --------->ARR11(3)            --------->ARR14(2)      --------->ANAC58          <---------ALFIN1     ---------->DOF2                  <------ZmHOX2a(1)        --------->ANAC46       <---------ALFIN1 ----->ANAC58                 <------MYB46(1)                <---------ALFIN1         --------->ANAC46 ----->ANAC58                 <------MYB83            <---------AHL20(2)        --------->REM1(1)   agaaaatcaaagatataagtatagccttcgcttggtgataggatcttatccactatataatccacacccatcaatcccttctacatctccaccacttgtt  4758500  Previous    Next  AGI:  At5g14730.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G01513.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO64332.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN65788.1) Range:  from: 4756221    to: 4757660    Orientation: Forward Links:  TAIR  MIPS    AGI:  At5g14740.1    Description:  CA2 (BETA CARBONIC ANHYDRASE 2); carbonate dehydratase/ zinc ion binding. Identical to Carbonic anhydrase 2 (CA2) [Arabidopsis Thaliana] (GB:P42737;GB:Q42116;GB:Q9FDZ0;GB:Q9LER2); similar to CA1 (CARBONIC ANHYDRASE 1), carbonate dehydratase/ zinc ion binding [Arabidopsis thaliana] (TAIR:AT3G01500.2); similar to CA1 (CARBONIC ANHYDRASE 1), carbonate dehydratase/ zinc ion binding [Arabidopsis thaliana] (TAIR:AT3G01500.1); similar to CA1 (CARBONIC ANHYDRASE 1), carbonate dehydratase/ zinc ion binding [Arabidopsis thaliana] (TAIR:AT3G01500.3); similar to chloroplast carbonic anhydrase precursor [Thlaspi caerulescens] (GB:AAS65454.1); contains In Range:  from: 4757975    to: 4762618    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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