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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
<---------
At4g35610
--------->
At4g35610
-
MYB46(1)
--------->
ANAC58
-
MYB83
<---------
ALFIN1
--------->
ANAC46
<---------
At4g35610
-->
MYB59
--------->
KAN4(2)
--------->
ANAC58
------>
NtERF2
-->
MYB46(2)
<-------
TEIL
--------->
AtLEC2
<---------
ANAC58
<----------
-
MYB52(1)
<---------
ANAC58
<---------
ANAC58
<---------
ANAC46
--------->
ARR11(3)
-->
AGL15
<---------
ANAC58
<---------
ANAC58
<---------
ANAC58
<---------
ARR11(3)
----
AGL1
<---------
ANAC46
<----------
DOF2
--------->
ANAC55(2)
--------->
At4g35610
<----------
taatagttttctgatgtttcttggttcattccccactttccttgcaattcaagtaacatggcttggctgccatcagacatataaggtctattcgtcatgt
4757600
----------->
GT1
--------->
ANAC55(1)
<---------
ANAC58
--------->
ANAC55(2)
<---------
ANAC58
<---------
ANAC55(2)
--------->
ZAT18
--------->
ANAC58
<---------
ZAT18
--------->
ANAC58
<---------
GLK1(1)
-
TGA1
<---------
AHL20(2)
<-----------
GT1
<---------
DAG2
--------->
GLK1(1)
-
HVH21
<---------------
AGL15
<-----------
GT1
<----------
DOF2
ctagattgcgcttgcctattttaagcacgtattgtgaaatttccctcttgacttccaaga
tggaaaactttttgactagagaaatcagttctgttcagtt
4757700
--------->
ANAC46
--------->
YAB1
--------->
ANAC58
<---------
ATHB12
--------->
LBD16
--------->
ANAC58
--------->
ZAT18
<---------
LBD16
--------->
ANAC58
<---------
ZAT18
<---------
ANAC46
-
--------->
WOX13(1)
<---------
ZAT14
<---------
ANAC55(2)
<-----
--------->
MYB46(3)
--------->
ZAT14
--------->
ANAC55(2)
---------
----------->
RAV1(1)
<---------
ICU4
<---------
At4g35610
--------->
ANAC58
<-----
tgagccacaacaatcaacattctctcttaattagtccacttgttgtgcctagtctgctattaagtaagtgcctggaaacaaggaattgggagtataagaa
4757800
---------->
DOF2
--------->
ANAC58
>>>>>>>>>>
bZIP19
--------->
ANAC58
--------->
ETT(2)
--------->
ANAC58
<<<<<<<<<<
bZIP23
--------->
ANAC58
<---------
ETT(2)
---------->
DOF2
--------->
CCA1(2)
----------->
RAV1(1)
<---------
YAB1
<<<<<<<<<<
bZIP19
-------->
TOE2(3)
--------->
ANAC46
--------->
YAB1
>>>>>>>>>>
bZIP23
------
----
GLK1(2)
--------->
ANAC58
<---------
ETT(2)
--------->
DDF1
<-------
>
YAB1
--------->
ANAC58
<-------
GAMYB
--------->
YAB1
--------
----
ICU4
--------->
AtLEC2
<----------
ID1
<---------
AHL20(2)
<---------
DDF1
------>
ZmHOX2a(1)
tttcttaatattcgtttttcatgcaacaaagcaagtaaagacaagactgttgacatataatgatatgagaatgtcgacatagtttcttcatcctcccaca
4757900
---------
<--------
<---------
YAB1
--------->
ARR11(3)
--->
ANAC46
------>
ZmHOX2a(1)
<---------
ARR11(3)
--
ALFIN1
--------->
CCA1(2)
------->
TEIL
<-----------
GT1
*
TSS
----------->
ARR10
--->
RAV1(1)
<-----------
ARR10
--------->
ANAC46
<------
ZmHOX2a(1)
---------
taatacatatgatataagtagcgaatcaaaccctatgcacatactccatttctcctctctcccttccctagagg
aaatagagaagctcttcaagtatccg
4758000
<---------
ANAC55(2)
--------->
ANAC55(2)
<-------
TEIL
<---------
LBD16
--------->
ARR14(1)
--------->
CCA1(2)
--------->
AHL20(2)
--------->
ARR14(2)
--------->
YAB1
<---------
ARR14(2)
<---------
ATHB12
--------->
ARR11(1)
--------->
ICU4
<---------
GLK1(1)
<---------
YAB1
----------->
ARR10
------->
MYC3
<------
NtERF2
<-------
MYC3
--------->
LBD16
------->
MYC2
<-----------
GT1
<---------
AHL20(2)
--------->
GLK1(1)
<-------
MYC2
---------->
ID1
>
ARR14(2)
<---------
ANAC46
<---------
ANAC58
<-------
TEIL
<---------
YAB1
-
ARR14(2)
<---------
DEAR3(1)
<---------
ANAC46
<---------
At4g35610
>
GLK1(2)
<---------
LBD16
<---------
ANAC58
--------->
At4g35610
atgtttttgtttaatcaacaagaggcggagatacgggagaaattgcatgtgtaatcataaaatgtagatgttagcttcgtcgtttttactatagtttagt
4758100
<-----------
TGA1
--------->
GLK1(2)
---------->
ID1
<-----------
GT1
--------->
ICU4
<-----------
GT1
--------->
YAB1
<---------
ANAC46
<-----
<----------
DOF2
<----------
DOF2
<---------
AHL20(2)
--------->
ARR11(3)
<<<<<<<<<
TBF1
<---------
ICU4
--------->
TOE2(3)
<---------
YAB1
--------->
YAB1
<---------
ARR11(3)
tctcttcttcttcttttttcgtcattacaatctctttcttaatttacttcttcttgatagtataattaagttgtttgtaataatctgtacaaagatgttg
4758200
--------->
HSFC1(1)
<---------
HSFC1(1)
<---------
HSFB2a(2)
--------------->
AGL15
--------->
HSFB2a(2)
--------->
ZAT14
<---------
AHL20(2)
<---------
DAG2
<-----------------
AGL2
--------->
AHL20(2)
<----------
DOF2
<-----------------
AGL1
--------->
YAB1
<---------
ANAC58
<---------
DAG2
<---------
GLK1(2)
<---------
YAB1
<---------
ANAC58
<-----------------
AGL1
<-----
----
ANAC46
---------->
DOF2
--------->
MYB52(2)
--------->
PCF5
<---------
ZAT14
------
tgttctcataaaaaattcaattttgtaaagaagctctacatgttccttgctctgtaaac
atggtccccttttggactacagtttctcgaaatggctcatc
4758300
----------->
RAV1(1)
--------->
RAP2.6(2)
<----------
ID1
--------->
ANAC58
--------->
ANAC46
--------->
ANAC58
----
---------->
DOF2
--------->
CCA1(2)
<---------
TOE1(3)
--------->
At4g35610
<---------
ARR14(2)
<----------
DOF2
----
----
At4g35610
<---------
ARR14(2)
--------->
ARR11(3)
<---------
AtMYB61
--------->
DAG2
--->
At4g35610
--------->
ARR14(2)
----------->
GT1
---------->
DOF2
<---------
TOE2(3)
agactcagagacgactctccaatctgcttcaaaagccacaaaacag
gtaaaacagatatagagacacaaagtgatggtctttatttagataaggttagca
4758400
------>
ZmHOX2a(2)
<------
ZmHOX2a(2)
<-----------
ARR10
--------->
WOX13(1)
--------->
ARR11(3)
<---------
ATHB12
--------->
CCA1(2)
<---------
ARR11(3)
--------->
MYB46(3)
--------->
ARR11(3)
<---------
ARR14(2)
--------->
ANAC58
<---------
ARR11(3)
--------->
ARR14(2)
--------->
ANAC58
<---------
ALFIN1
---------->
DOF2
<------
ZmHOX2a(1)
--------->
ANAC46
<---------
ALFIN1
----->
ANAC58
<------
MYB46(1)
<---------
ALFIN1
--------->
ANAC46
----->
ANAC58
<------
MYB83
<---------
AHL20(2)
--------->
REM1(1)
agaaaatcaaagatataagtatagccttcgcttggtgataggatcttatccactatataatccacacccatcaatcccttctacatctccaccacttgtt
4758500
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AGI:
At5g14730.1
Description:
similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G01513.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO64332.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN65788.1)
Range:
from: 4756221
to: 4757660
Orientation: Forward
Links:
TAIR
MIPS
AGI:
At5g14740.1
Description:
CA2 (BETA CARBONIC ANHYDRASE 2); carbonate dehydratase/ zinc ion binding. Identical to Carbonic anhydrase 2 (CA2) [Arabidopsis Thaliana] (GB:P42737;GB:Q42116;GB:Q9FDZ0;GB:Q9LER2); similar to CA1 (CARBONIC ANHYDRASE 1), carbonate dehydratase/ zinc ion binding [Arabidopsis thaliana] (TAIR:AT3G01500.2); similar to CA1 (CARBONIC ANHYDRASE 1), carbonate dehydratase/ zinc ion binding [Arabidopsis thaliana] (TAIR:AT3G01500.1); similar to CA1 (CARBONIC ANHYDRASE 1), carbonate dehydratase/ zinc ion binding [Arabidopsis thaliana] (TAIR:AT3G01500.3); similar to chloroplast carbonic anhydrase precursor [Thlaspi caerulescens] (GB:AAS65454.1); contains In
Range:
from: 4757975
to: 4762618
Orientation: Forward
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.