Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                     --                                                                                             --------                                                                                           <---------ANAC58                                                                                           <---------ANAC46                                                                                           <---------ANAC55(2)                                                                                           <---------ANAC58                                                                                         <---------ANAC46               ----------------->AGL3                                                  <-----------HVH21               <-----------------AGL2                                             --------->ARR11(3)            --------->GLK1(1)            <---------O2                             <---------ARR11(3)        ----------->GT1                --------->CCA1(2)         <---------ZAT6  --------->YAB1    <-   --------->ZAT2               <------ZmHOX2a(1)    <------ZmHOX2a(1)          <---------YAB1-------   <---------ZAT2             --------->ANAC58 <---------HSFB2a(2)   <---------AtMYB61<-----------RAV1(1) ->ANAC46--------->At5g28300  --------->ANAC58 --------->HSFB2a(2)   --------->MYB59<---------ICU4<--   attggagctagggtaaatccaattttggaggtaaggaagagagacgagtccagaaggagagacattagagtgaggtcgtttgatgatcatgtcgcgtgta  4474000          --------->ANAC58                      <---------ARR11(3)          --------->ANAC46                     <---------At4g35610        <---------DOF5.7(2)                    --------->bZIP60(2)        ---------->DOF2                        --------->At4g35610       --------->ARR14(2)                ===============HOX2a_HOX2a       <---------ARR14(2)          --------->CCA1(2)                        <---------ANAC46    <---------ANAC55(2)            --------->ARR14(1)                     ------>NtERF2    --------->ANAC55(1)           --------->ARR11(1)                     --------->ANAC58    --------->ANAC58              <---------ARR14(2)                     --------->ANAC58    --------->ANAC46              <---------GLK1(2)    <---------ANAC46<---------TGA2(2)    --------->ANAC55(2)           --------->ARR14(2)--------->ANAC46   <---------ATERF1(1)    --------->ANAC58<---------ARR14(2)   <------ZmHOX2a(1)            ----------->TGA1 ------->ARR14(2)   --------->ARR14(2)<---------HSFB2a(2)             ----------->HVH21 ->ALFIN1 --------->ANAC58      ----------->ARR10<------ZmHOX2a(2)  <---------At4g35610            -- --------ARR14(2)   --------->ARR11(3)--------->HSFB2a(2)       <---------REM1(1)---------->DOF2  <-- -->REM1(2)        <------ZmHOX2a(1)<-------TEIL--------->ARR11(3)  --------->ZAT2       <---------LBD16 ----ZmHOX2a(1)    =====================================HOX2a_HOX2a --------->At4g35610 <------NtERF2   ggattcacgtaaacgcaaggaggatactgagggtaagattcgaggagccagatcacgacggggatgttgtagctgacgccttggaaaggcatcgggattg  4474100                          ------>ZmHOX2a(2)                     --------->ANAC46                     --------->ANAC58             ====================HOX2a_HOX2a             <------ZmHOX2a(1)             ===================HOX2a_HOX2a       <----------DOF2   <------ZmHOX2a(2)      <---------ANAC46  <---------ARR14(2)         ----------------->AGL1     <------NtERF2   <---------ANAC55(2)           <-----------------AGL2              <------MYB46(1)    ------>NtERF2    --------->ANAC55(2)        --------->DOF5.7(2)                    <------MYB83    <---------DEAR3(2)  --------->ARR14(2)   <---------TOE2(3)                        --------->MYB59   <---------DEAR3(1)--------->ANAC55(1)    <---------DOF5.7(2)              <------ZmHOX2a(1)  <---------MYB52(1) --------->ANAC58 <---------ANAC58                <XXXXXXXXXXXXXXXXXXXXXMIR831--- <-----------HVH21  <---------LBD16   <---------ANAC58        --------->ALFIN1        <---------TOE2(3) ------->DEAR3(2)  --------->MYB52(1) <---------ANAC46<---------MYB52(1)--------->ALFIN1       <----- -------At5g28300--------->GLK1(2) <---------MYB52(1)<---------RAP2.6(3)<---------REM1(1)     <------ZmHOX2a(1)   taccgtcggcttggaggagaatcacggatcggccatcgttgtgtgtaaacgttgccgttttggggtcgagggaagtgtaggaagagattaggttgaggag  4474200                                                                                       ------>ZmHOX2a(2)                                                                                       ==============                                                                                      <---------GLK1(1)                                                                <---------LBD16       --------->GLK1(1)                                                                <---------ZAT14      --------->ARR11(3)                                                                --------->ZAT18      <---------AGP1                                                                --------->ZAT14      <---------ARR11(3)                                                               --------->ALFIN1      <---------ARR14(2)                                                             <---------ANAC58        --------->ARR14(2)                              <---------SPL7                 <---------ANAC58       <---------CCA1(2)                             <---------ANAC58            <---------ANAC46   <---------ARR14(2)          xxxxxxxxxxxxxxxx>smallRNA(i)  --------->At4g35610 <---------MYB46(3) <---------AtMYB61       <---------GLK1(2)     <---------ANAC46           --------->MYB55(2) <------ZmHOX2a(1)  ------- --------->WRKY12            <---------ANAC58           <---------MYB46(3) ===================HOX2a_HOX2a ----------->HVH21          <------NtERF2           --------->ANAC58  ========================HOX2a_HOX2a ------>ALFIN1            <---------DEAR3(1)        --------->ANAC58  <------ZmHOX2a(1)============== ----AtMYB61             <---------HSFB2a(2)      <---------ALFIN1--------->LBD16  <---------MYB46(3)   gtgttgacggattagcgacttggtgttctcggcgtatggaagagcggaagggccacgctgggtgagtgcggaggagaggaattggtggatctcttgcatc  4474300          --------->ATERF1(1)          <------ZmHOX2a(1)                             ----------->TGA1        --------->ALFIN1                            <-----------RAV1(2)                       <------    <------NtERF2                                 ----------->RAV1(1)                         -------   --------->LBD16                                ------>NtERF2                  <---------ICU4  --------->DEAR3(1)  --------->ANAC58           --------->ETT(2)                --------->YAB1 <---------LBD16      --------->ANAC58<---------ANAC55(2)       --------->MYB52(1) <---------YAB1 ================HOX2a_HOX2a          <---------ANAC46  ----------->HVH21        -------->HAHB4   <-- >TEIL <------ZmHOX2a(1)              <---------ANAC58<---------At4g35610       --------->ICU4------- =============HOX2a_HOX2a             <---------ANAC58--------->At4g35610       <---------ATHB51  <--   ttcgccggaggaggagccattagcaagtcaaactccgattacttgaagacgacgacagatgacgaataacgaattcttcttaattatgaataggcgaatt  4474400       <---------LBD16     <-----------GT1    *TSS --------->LBD16                                          ----------->GT1 ---ARR14(2)                                                     <---------TOE2(3) -->ARR14(2)<------ZmHOX2a(2)                                 --------->AHL20(1)           ---------- ----MYB83 --------->ARR14(2)                                --------->YAB1            --------->AHL20(2) -->GLK1(2)<---------ARR14(2)       ------------>CBF       --------->AHL20(2)          --------->YAB1 ----MYB46(1)------>ZmHOX2a(2)  <---------AHL20(2)     ----------->GT1         ---------->DOF2   tggttttataccggatcgaatagtttgggagaaattaatccaatttagtctaaagttttgaaaaaataatgtaaatttcttcaaagtaataaaaaaagtc  4474500                                                    ---------->DOF2                                                  --------->CCA1(2)                                             ---------->DOF2                                       --                                      --------->WRKY38(1)                                 ---------->DOF2                              --------->AtMYB61 --------->YAB1                  <---------ICU4 <-----                      ------->TEIL    --------->WRKY45                         <---------ATHB12------ >DOF2              <---------ZAT18   --------->WRKY12                        <---------ARR11(3)  ---   tgaacttcaaattccaatattctgcacctaaaccaaaactttgaccccaaagataaaagtcttaatagttgaaacttcaaaatcattctgcaaaaagaat  4474600                                                 ---------->DOF2                                              --------->At4g35610                                         <--------HAHB4          --------->DAG2                 --------->YAB1         ---------->DOF2                <---------YAB1   --------->GLK1(2) ---->ZmHOX2a(1)                      --------------->AGL15 ----ARR14(2)                        <-----------------AGL2                              <---------DAG2 --->GLK1(2)                         ----------------->AGL3                 <----------DOF2   <------ ------>TOE2(3)         <---------YAB1<---------------AGL15           <---------ICU4     <----------DOF2   cctaaaatcaaaaaagtaatctagttttcattcattcattctattattagctaaagaacaatctgaaaccaattctgactttgttgtatcacttttatgt  4474700                                              <---------YAB1        ---------->DOF2                                            --------->YAB1   ----------->GT1                                         ----------->GT1    ----------->GT1     <-------TEIL                    --------->ATHB12     <---------At4g35610 ---YAB1                            <---------YAB1    --------->AtLEC2           <-------TEIL     <--   ttcaagatgcattgttcaaactctctatgtaaaacattttgattagttataatgcaatgcagatgttaaaaaaagaagttagattcatgttttagtattt  4474800                                    --------->YAB1                              ------->TEIL                              <---------ARR11(1)                              --------->ARR14(2)                              <---------ARR14(2)                             <---------ARR14(1)                             <---------CCA1(2)                                    <---------YAB1                     ------>ZmHOX2a(1)            <---------TOE2(3)               --------->AtLEC2            <-----------GT1<---------ANAC55(2)  <---------AHL20(2)        ------>ZmHOX2a(2)         -        ---------->ID1     --------->ANAC55(2) --------->AHL20(2)       <---------ARR11(3)          <   <----------DOF2  --------->TOE1(3)       --------->ATHB12            --------->ARR11(3)         <- ---------GT1       --------->TOE2(3)  <---------AHL20(2)          <---------ARR14(2)      <<<<<<<<<<   tcacacttttgtcttaactattccttaaaacgtatctataatgaattgatttaatgaatagttttagtgtatatgatcttgatcatgctaaattgacaat  4474900  Previous    Next  AGI:  At5g13860.1    Description:  ATELC-LIKE/ELC-LIKE; small conjugating protein ligase. similar to ATELC/ELC, ubiquitin binding [Arabidopsis thaliana] (TAIR:AT3G12400.1); similar to unknown [Populus trichocarpa x Populus deltoides] (GB:ABK96512.1); contains InterPro domain Ubiquitin-conjugating enzyme, E2; (InterPro:IPR000608); contains InterPro domain Tumour susceptibility gene 101; (InterPro:IPR008883); contains InterPro domain Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135) Range:  from: 4473091    to: 4474404    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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