Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                             <---------AHL20(1)                                                           --------->AHL20(1)                                                           --------->ARR11(3)                                                           <---------ARR11(3)                                                           <---------AHL20(2)                                             <----------DOF2               <-----------GT1 <---------YAB1                           <---------ARR11(3)       <---------DAG2                 <-- ------AHL20(2)                <---------ANAC46            --------->AHL20(2)                     --- ->CCA1(2)                     <---------ANAC58      ----------->GT1   <---------AHL20(2)        ---- -ARR11(3)           <-----------GT1      --------->ARR11(3)  <-----------GT1  <---------CCA1(2) <--- >ARR11(3)    ----------->GT1  <---------ANAC58<---------AHL20(2)  <----------DOF2            -------   tatatgattcaatctatagttatatacgattttgcgtttgaaaatgtctttaatcgagtaatatattccctttttattttcaaatctcgactaaaatata  2063100                                                         <---------ANAC46                             --------->YAB1              --------->HSFB2a(2)                             ----------->GT1             <---------HSFB2a(2)              <---------GLK1(1)     <---------AHL20(2)  <---------LBD16           <---------YAB1    <---------ANAC46      --------->ATHB51                           <------         ----------->GT1     <---------ANAC58      <---------ICU4                            <-------       <---------GLK1(2)     <---------ANAC58    <----------DOF2                          <---------- -------------AGL15        ------->TEIL       ------->GAMYB                   <------ZmHOX2a(2) ------------>AGL15     <---------ANAC55(2)   --------->RAP2.6(2)             ======================= ------------->AGL2     --------->ANAC55(2)<-----------GT1--------->LBD16    <---------ARR11(3) --------------AGL3------>ZmHOX2a(1)--------->AHL20(2)<-----------GT1        --------->ARR11(3) -->AHL20(1)  --------->GLK1(1)<---------YAB1--------->MYB46(3)        --------->MYB59  <-----------GT1   ctataaatagattgtgatatcctaatatgtatcgtgattttatttcaaccgcattatttccggataatttagttagatagatcatacaaattacaccttt  2063200                                                                                   --------->YAB1                                                                              <---------TOE1(3)                                                                              <---------TOE2(3)                                                                             <---------DOF5.7(2)                                                                             --------->MYB52(1)                                                              --------->AHL20(2)--------->YAB1                                                         --------->TOE2(3) --------->DOF5.7(2)                                                       <---------TOE2(3)  --------->TOE2(3) <------ZmHOX2a(1)   ----------->GT1  --------->MYB46(3)--------->YAB1    --------->TOE1(3)     <---- ----DOF2    ------->GAMYB--------->ZAT6        ------>ZmHOX2a(1)  --------->TOE2(3)         <------- --DAG2     <---------MYB52(2)       -------->P--------->TOE2(3)  <---------ICU4--------->TOE2(3) --- -GT1       --------->MYB46(3) --------->MYB46(3)  --------->TOE2(3)     <---------ICU4    ---------- =======HOX2a_HOX2a--------->ICU4 <---------MYB52(2)   <---------YAB1--------->AHL20(2)---------->DOF2   caaggacattagcaacgaacaattagtaacacaaccactaaccactaatccttcattaacataaataaacattaaacattaacgataataaaagtgtgat  2063300                                                  <---------HSFB2a(2)                                               --------->GLK1(2)                                               <---------ARR14(2)                                               ------->TEIL      --------->ANAC58                                               --------->ARR14(2)--------->ANAC46                                       <---------YAB1       <---------ETT(1)                                      <---------AHL20(2)    --------->At1g77200                                      --------->AHL20(2)    --------->DEAR4(1)                                     --------->YAB1         --------->DEAR3(1)      <---------ARR11(3)        --------->At5g28300         --------->DREB2C(2) -----YAB1          <----------ID1   <---------AHL20(2)    --------->DEAR3(2) --YAB1--------->CCA1(2)       ----------->GT1<---------GLK1(2)  --------->ANAC58 ------->DOF2    --------->CCA1(2)   --------->AHL20(2)<---------ALFIN1<----------DOF2    --------->AHL20(2) ->GT1--------->ARR11(3) ---------->DOF2      <---------CCA1(2)<---------ALFIN1         ----------->GT1   taaagtgagatatatatagataggggcaaaagacagtaattaaaattcgaatctcgaacacaccgacacgcttctttgaagtggcattttaagtaaataa  2063400                                                                                                >>>>>                                                                                        *TSS<--------                                                                                        <---------ALFIN1                                                                                   --------->ANAC46                                                                                  <---------TOE1(3)                                                            <---------ANAC46      <---------TOE2(3)                  <---------AHL20(2)                        <---------ANAC58     <---------DOF5.7(2)                 <---------AHL20(2)              --------->ANAC46              --------->DOF5.7(2)                 --------->AHL20(2) <---------DAG2          <---------ANAC58   <---------MYB52(1)           ----------->GT1          <----------DOF2  ------------>CBF         <-------GAMYB<---------DAG2   ctccaaaaacgaggggtattttaatttgaaactcatcactttaagtcatccccttaacaatgtcgtctaaacaaatggtccgttaacgaaacacctttct  2063500                                                                                    --------->ANAC58                                                                                    <---------MYB52(2)                                                                                   ------>NtERF2                                                                                 <------NtERF2                                                                                ------>NtERF2                                                                               --------->ANAC46                                                                               --------->ANAC58                                                                             --------->ANAC55(2)                                                                             <---------TGA1a                                                                             --------->TGA1a                                                                             <---------ANAC55(2)                                                                          <---------REM1(2)                                                                         <-----------TGA1                                                                        --------->ANAC46                                                                        --------->ANAC58                                                                        --------->ANAC58                                                                        --------->O2--------->ANAC58                                                                        --------->TGA1a                                                                        --------->bZIP60(2)                                                                    --------->AtMYB61                                                                   --------->MYB46(3)   --------->ZAT6                                                                =======================bZIP_DOF                                                                ==================bZIP_DOF                                                                ---------->DOF2--------->ANAC58                                                            ===========================MYC_MYB  <----                      <----------DOF2                       --------->TOE2(3)--------->ANAC58  ------           --------->DAG2                                   ======================MYC_MYB    -------- >>>>>>>>>>>>LFY <---------At4g35610                        ------->GAMYB<-----------HVH21  --------- --DOF2   ---------->DOF2       <-----------GT1             --------->TOE1(3)--------->ANAC58--------   ccattgttcttaaaaagtcatcttcttttttttttttcttcatacatctctctctctctcaaccctaaaaccactcgtcacgcgccacgaactctacacc  2063600                                                                                                    -                                                                                                    -                                                                                                    <                                                                                                    -                                                                                                    -                                                                                                    -                                                                                                    -                                                                                                    -                                                                                                    -                                                                                                    -                                                                                                    -                                                                                                   --                                                                                                   --                                                                                                   --                                                                                                   --                                                                                                   <-                                                                                                   --                                                                                                  <--                                                                                                  ---                                                                                                  ---                                                                                                  ---                                                                                                 ----                                                                                                 <---                                                                                                 ----                                                                                                 ----                                                                                                 ----                                                                                                 <---                                                                                                 ----                                                                                                 ----                                                                                                 ----                                                                                                -----                                                                                                -----                                                                                                -----                                                                                                -----                                                                                                -----                                                                                                -----                                                                                                -----                                                      <---------ANAC55(2)                     -------                                                   <---------MYB52(1)                         -------                                                  <-------GAMYB                               -------                                                <------NtERF2                                <-------                                               ------>NtERF2                                 <-------                                              --------->ANAC46                               --------                                              --------->ANAC58           <---------DEAR3(1)  --------                                              --------->ANAC58           <---------ANAC46   -------->P                                            <---------At4g35610         <---------LBD16    --------->MYB55(1)                                            --------->At4g35610       --------->ANAC46     ------->GAMYB                                        <-----------HVH21            <---------LBD16      <---------MYB55(2)                                       <---------ANAC58          --------->ARR14(2)       <---------MYB111(2)     <---------ALFIN1    --------->AtMYB61<-----------RAV1(2)    <---------ARR14(2)       --------->MYB46(3)     --------->ANAC46    <---------ALFIN1<------NtERF2<---------ANAC46<---------DEAR3(1)  <---------MYB52(2) -----ALFIN1          <---------ALFIN1 --------->bZIP60(1)      --------->WOX13(1)   ------->GAMYB<-- --->ANAC46          --------->MYB46(3)--------->TGA2(1) --------->ARR14(2)       ----------->RAV1(1) ->ANAC46           ------>MYB83       <---------ANAC58  <---------ARR14(2)      --------->MYB46(3)-- >ZAT14             ------>MYB46(1)    <---------ANAC46  ---------->TaMYB80<------NtERF2----------->RAV1(1) ->REM1(1)     <-----------GT1         <---------bZIP60(1)<----------TaMYB80  <------ZmHOX2a(1)<-----   acattccccactactagtgaccatccacctctccgtctatggcgtcagacgccgttaagtatatgccaatccacggcggaggaacaacagcaacaaccgc  2063700 ----------->RAV1(1) ------>NtERF2 <---------DDF1 -------->RRTF1(2) -------->DREB2C(2) ---------ETT(1) -------->DEAR3(1) -------->RRTF1(3) -------->RAP2.3(3) ---------->HVH21 -------->RAP2.6(2) -------->RAP2.3(2) -------->DEAR4(1) -------->At1g77200 ------->ORA47(2) ------->DEAR3(2) ------->RRTF1(1) ------->ATERF1(1) -----NtERF2 ------->RAP2.3(1) -------ATERF1(1) ------>ABI4(1) --->NtERF2 ------>At4g35610 ----->DEAR3(1) ------DEAR3(1) ----->RAP2.6(2) ----->RAP2.3(3) ----->RRTF1(3) ------ATERF1(2) ----->RRTF1(2) ----->ATERF1(2) ----->RAP2.3(2) ---->RRTF1(1) ---->ATERF1(1) ---->DEAR4(2) ---->RAP2.6(1) ---->ORA47(2) ---->ERF1 ---->RAP2.3(1) >GAMYB   --------->ARR11(3) -->ANAC46<---------ARR11(3) -->DEAR3(1) -----AtMYB77 --MYB55(2) ->MYB46(3)                                                                                        <- ->DEAR3(2)                                                                                       <-- -------At4g35610                               <----------DOF2         --------->TOE2(3)         <-- ------->ERF1                             --------->TOE1(3)     <-----------TGA1              <------ ----ATERF1(1)        --------->At4g35610 --------->TOE2(3) <----------DOF2  ---------->ID1 <--------   cgccgacatcaagagcttcttctccgctctaaaacccaaaaaaacctcaactttcgcttacgctttcgtcataacctttgtctcattcactctcttcttt  2063800                                                                                           ------>ZmHOX2a(2)                                                                                          <---------GLK1(1)                                                                                          <------ZmHOX2a(2)                                                                                          --------->GLK1(1)                                                                                         --------->ARR14(2)                                                                                         <---------AGP1                                                                                         <---------ARR14(2)                                                                 --------->TOE2(3)       <---------ARR11(3)                                                                 --------->AtMYB61       <-----------ARR10                                                                 ------->GAMYB          <---------CCA1(2)        ------>ZmHOX2a(1)                                  --------->ANAC46             <---------ARR14(1) ---------DOF2                                             <---------ALFIN1            --------->LBD16 -------ANAC58                                           ------>ZmHOX2a(1)            <---------HSFB2a(2) -------ANAC58                            --------->ARR11(3)    --------->MYB46(3)    --------->HSFB2a(2) ----DOF2                                 <---------ARR11(3) --------->MYB46(3)      <---------LBD16 ----------------ANAC81       <---------TOE1(2)       ------>ZmHOX2a(1)         <---------ALFIN1   gcttttagtccttctccaaactcatcttctccttggttctctaacatcttcacttcctcctccacaaccacaacttcagacaacacttccggatctcagt  2063900                                                                        <---------ARR14(2)                                                                        --------->ARR14(2)                                                                 ------>NtERF2                                                                --------->ANAC58                                                                --------->bZIP60(1)                                                        <------ZmHOX2a(2)                                                       --------->AGP1   <---------GLK1(2)                                                 --------->AtMYB61 ----------->RAV1(1)                                               ------>MYB46(1)  --------->TGA2(1)                                               ------>MYB83     <---------TGA2(1)                                          ------>MYB83 --------->ARR11(3)                                          ------>MYB46(1)       --------->ANAC58                   <-                                        ------->GAMYB  --------->ARR14(2)                    --------                                        --------->AtMYB61    ----------->HVH21          --------->ANAC58                                        <---------MYB59<---------ARR14(2)--------->GLK1(2) <---------ALFIN1                             <-----------HVH21--------->ANAC46  <---------bZIP60(1)     --------->ANAC58                       >>>>>>>>>>>>>>>>>LFY  --------->MYB46(3) --------->ANAC46        --------->ANAC46              <---------CCA1(2)        --------->MYB46(3)    ----------->TGA1         <---------DOF5.7(2)   tctcttcaattttctcatatattcttcccaatgtcacttcaaccaaacccaccaatagatccagtgacgccacagattctctctctgttaacgccacttc  2064000  Previous    Next  AGI:  At5g06700.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G12060.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO23412.1); contains InterPro domain Protein of unknown function DUF231, plant (InterPro:IPR004253) Range:  from: 2063488    to: 2066040    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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