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Chromosome 1
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Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
<---------
AHL20(1)
--------->
AHL20(1)
--------->
ARR11(3)
<---------
ARR11(3)
<---------
AHL20(2)
<----------
DOF2
<-----------
GT1
<---------
YAB1
<---------
ARR11(3)
<---------
DAG2
<--
------
AHL20(2)
<---------
ANAC46
--------->
AHL20(2)
---
->
CCA1(2)
<---------
ANAC58
----------->
GT1
<---------
AHL20(2)
----
-
ARR11(3)
<-----------
GT1
--------->
ARR11(3)
<-----------
GT1
<---------
CCA1(2)
<---
>
ARR11(3)
----------->
GT1
<---------
ANAC58
<---------
AHL20(2)
<----------
DOF2
-------
tatatgattcaatctatagttatatacgattttgcgtttgaaaatgtctttaatcgagtaatatattccctttttattttcaaatctcgactaaaatata
2063100
<---------
ANAC46
--------->
YAB1
--------->
HSFB2a(2)
----------->
GT1
<---------
HSFB2a(2)
<---------
GLK1(1)
<---------
AHL20(2)
<---------
LBD16
<---------
YAB1
<---------
ANAC46
--------->
ATHB51
<------
----------->
GT1
<---------
ANAC58
<---------
ICU4
<-------
<---------
GLK1(2)
<---------
ANAC58
<----------
DOF2
<----------
-------------
AGL15
------->
TEIL
------->
GAMYB
<------
ZmHOX2a(2)
------------>
AGL15
<---------
ANAC55(2)
--------->
RAP2.6(2)
=======================
------------->
AGL2
--------->
ANAC55(2)
<-----------
GT1
--------->
LBD16
<---------
ARR11(3)
--------------
AGL3
------>
ZmHOX2a(1)
--------->
AHL20(2)
<-----------
GT1
--------->
ARR11(3)
-->
AHL20(1)
--------->
GLK1(1)
<---------
YAB1
--------->
MYB46(3)
--------->
MYB59
<-----------
GT1
ctataaatagattgtgatatcctaatatgtatcgtgattttatttcaaccgcattatttccggataatttagttagatagatcatacaaattacaccttt
2063200
--------->
YAB1
<---------
TOE1(3)
<---------
TOE2(3)
<---------
DOF5.7(2)
--------->
MYB52(1)
--------->
AHL20(2)
--------->
YAB1
--------->
TOE2(3)
--------->
DOF5.7(2)
<---------
TOE2(3)
--------->
TOE2(3)
<------
ZmHOX2a(1)
----------->
GT1
--------->
MYB46(3)
--------->
YAB1
--------->
TOE1(3)
<----
----
DOF2
------->
GAMYB
--------->
ZAT6
------>
ZmHOX2a(1)
--------->
TOE2(3)
<-------
--
DAG2
<---------
MYB52(2)
-------->
P
--------->
TOE2(3)
<---------
ICU4
--------->
TOE2(3)
---
-
GT1
--------->
MYB46(3)
--------->
MYB46(3)
--------->
TOE2(3)
<---------
ICU4
----------
=======
HOX2a_HOX2a
--------->
ICU4
<---------
MYB52(2)
<---------
YAB1
--------->
AHL20(2)
---------->
DOF2
caaggacattagcaacgaacaattagtaacacaaccactaaccactaatccttcattaacataaataaacattaaacattaacgataataaaagtgtgat
2063300
<---------
HSFB2a(2)
--------->
GLK1(2)
<---------
ARR14(2)
------->
TEIL
--------->
ANAC58
--------->
ARR14(2)
--------->
ANAC46
<---------
YAB1
<---------
ETT(1)
<---------
AHL20(2)
--------->
At1g77200
--------->
AHL20(2)
--------->
DEAR4(1)
--------->
YAB1
--------->
DEAR3(1)
<---------
ARR11(3)
--------->
At5g28300
--------->
DREB2C(2)
-----
YAB1
<----------
ID1
<---------
AHL20(2)
--------->
DEAR3(2)
--
YAB1
--------->
CCA1(2)
----------->
GT1
<---------
GLK1(2)
--------->
ANAC58
------->
DOF2
--------->
CCA1(2)
--------->
AHL20(2)
<---------
ALFIN1
<----------
DOF2
--------->
AHL20(2)
->
GT1
--------->
ARR11(3)
---------->
DOF2
<---------
CCA1(2)
<---------
ALFIN1
----------->
GT1
taaagtgagatatatatagataggggcaaaagacagtaattaaaattcgaatctcgaacacaccgacacgcttctttgaagtggcattttaagtaaataa
2063400
>>>>>
*
TSS
<--------
<---------
ALFIN1
--------->
ANAC46
<---------
TOE1(3)
<---------
ANAC46
<---------
TOE2(3)
<---------
AHL20(2)
<---------
ANAC58
<---------
DOF5.7(2)
<---------
AHL20(2)
--------->
ANAC46
--------->
DOF5.7(2)
--------->
AHL20(2)
<---------
DAG2
<---------
ANAC58
<---------
MYB52(1)
----------->
GT1
<----------
DOF2
------------>
CBF
<-------
GAMYB
<---------
DAG2
ctccaaaaacgaggggtattttaatttgaaactcatcactttaagtcatccccttaacaatgtcgtctaaacaaatggtccgttaac
gaaacacctttct
2063500
--------->
ANAC58
<---------
MYB52(2)
------>
NtERF2
<------
NtERF2
------>
NtERF2
--------->
ANAC46
--------->
ANAC58
--------->
ANAC55(2)
<---------
TGA1a
--------->
TGA1a
<---------
ANAC55(2)
<---------
REM1(2)
<-----------
TGA1
--------->
ANAC46
--------->
ANAC58
--------->
ANAC58
--------->
O2
--------->
ANAC58
--------->
TGA1a
--------->
bZIP60(2)
--------->
AtMYB61
--------->
MYB46(3)
--------->
ZAT6
=======================
bZIP_DOF
==================
bZIP_DOF
---------->
DOF2
--------->
ANAC58
===========================
MYC_MYB
<----
<----------
DOF2
--------->
TOE2(3)
--------->
ANAC58
------
--------->
DAG2
======================
MYC_MYB
--------
>>>>>>>>>>>>
LFY
<---------
At4g35610
------->
GAMYB
<-----------
HVH21
---------
--
DOF2
---------->
DOF2
<-----------
GT1
--------->
TOE1(3)
--------->
ANAC58
--------
ccattgttcttaaaaagtcatcttcttttttttttttcttcatacatctctctctctctcaaccctaaaaccactcgtcacgcgccacgaactctacacc
2063600
-
-
<
-
-
-
-
-
-
-
-
--
--
--
--
<-
--
<--
---
---
---
----
<---
----
----
----
<---
----
----
----
-----
-----
-----
-----
-----
-----
-----
<---------
ANAC55(2)
-------
<---------
MYB52(1)
-------
<-------
GAMYB
-------
<------
NtERF2
<-------
------>
NtERF2
<-------
--------->
ANAC46
--------
--------->
ANAC58
<---------
DEAR3(1)
--------
--------->
ANAC58
<---------
ANAC46
-------->
P
<---------
At4g35610
<---------
LBD16
--------->
MYB55(1)
--------->
At4g35610
--------->
ANAC46
------->
GAMYB
<-----------
HVH21
<---------
LBD16
<---------
MYB55(2)
<---------
ANAC58
--------->
ARR14(2)
<---------
MYB111(2)
<---------
ALFIN1
--------->
AtMYB61
<-----------
RAV1(2)
<---------
ARR14(2)
--------->
MYB46(3)
--------->
ANAC46
<---------
ALFIN1
<------
NtERF2
<---------
ANAC46
<---------
DEAR3(1)
<---------
MYB52(2)
-----
ALFIN1
<---------
ALFIN1
--------->
bZIP60(1)
--------->
WOX13(1)
------->
GAMYB
<--
--->
ANAC46
--------->
MYB46(3)
--------->
TGA2(1)
--------->
ARR14(2)
----------->
RAV1(1)
->
ANAC46
------>
MYB83
<---------
ANAC58
<---------
ARR14(2)
--------->
MYB46(3)
--
>
ZAT14
------>
MYB46(1)
<---------
ANAC46
---------->
TaMYB80
<------
NtERF2
----------->
RAV1(1)
->
REM1(1)
<-----------
GT1
<---------
bZIP60(1)
<----------
TaMYB80
<------
ZmHOX2a(1)
<-----
acattccccactactagtgaccatccacctctccgtct
atggcgtcagacgccgttaagtatatgccaatccacggcggaggaacaacagcaacaaccgc
2063700
----------->
RAV1(1)
------>
NtERF2
<---------
DDF1
-------->
RRTF1(2)
-------->
DREB2C(2)
---------
ETT(1)
-------->
DEAR3(1)
-------->
RRTF1(3)
-------->
RAP2.3(3)
---------->
HVH21
-------->
RAP2.6(2)
-------->
RAP2.3(2)
-------->
DEAR4(1)
-------->
At1g77200
------->
ORA47(2)
------->
DEAR3(2)
------->
RRTF1(1)
------->
ATERF1(1)
-----
NtERF2
------->
RAP2.3(1)
-------
ATERF1(1)
------>
ABI4(1)
--->
NtERF2
------>
At4g35610
----->
DEAR3(1)
------
DEAR3(1)
----->
RAP2.6(2)
----->
RAP2.3(3)
----->
RRTF1(3)
------
ATERF1(2)
----->
RRTF1(2)
----->
ATERF1(2)
----->
RAP2.3(2)
---->
RRTF1(1)
---->
ATERF1(1)
---->
DEAR4(2)
---->
RAP2.6(1)
---->
ORA47(2)
---->
ERF1
---->
RAP2.3(1)
>
GAMYB
--------->
ARR11(3)
-->
ANAC46
<---------
ARR11(3)
-->
DEAR3(1)
-----
AtMYB77
--
MYB55(2)
->
MYB46(3)
<-
->
DEAR3(2)
<--
-------
At4g35610
<----------
DOF2
--------->
TOE2(3)
<--
------->
ERF1
--------->
TOE1(3)
<-----------
TGA1
<------
----
ATERF1(1)
--------->
At4g35610
--------->
TOE2(3)
<----------
DOF2
---------->
ID1
<--------
cgccgacatcaagagcttcttctccgctctaaaacccaaaaaaacctcaactttcgcttacgctttcgtcataacctttgtctcattcactctcttcttt
2063800
------>
ZmHOX2a(2)
<---------
GLK1(1)
<------
ZmHOX2a(2)
--------->
GLK1(1)
--------->
ARR14(2)
<---------
AGP1
<---------
ARR14(2)
--------->
TOE2(3)
<---------
ARR11(3)
--------->
AtMYB61
<-----------
ARR10
------->
GAMYB
<---------
CCA1(2)
------>
ZmHOX2a(1)
--------->
ANAC46
<---------
ARR14(1)
---------
DOF2
<---------
ALFIN1
--------->
LBD16
-------
ANAC58
------>
ZmHOX2a(1)
<---------
HSFB2a(2)
-------
ANAC58
--------->
ARR11(3)
--------->
MYB46(3)
--------->
HSFB2a(2)
----
DOF2
<---------
ARR11(3)
--------->
MYB46(3)
<---------
LBD16
----------------
ANAC81
<---------
TOE1(2)
------>
ZmHOX2a(1)
<---------
ALFIN1
gcttttagtccttctccaaactcatcttctccttggttctctaacatcttcacttcctcctccacaaccacaacttcagacaacacttccggatctcagt
2063900
<---------
ARR14(2)
--------->
ARR14(2)
------>
NtERF2
--------->
ANAC58
--------->
bZIP60(1)
<------
ZmHOX2a(2)
--------->
AGP1
<---------
GLK1(2)
--------->
AtMYB61
----------->
RAV1(1)
------>
MYB46(1)
--------->
TGA2(1)
------>
MYB83
<---------
TGA2(1)
------>
MYB83
--------->
ARR11(3)
------>
MYB46(1)
--------->
ANAC58
<-
------->
GAMYB
--------->
ARR14(2)
--------
--------->
AtMYB61
----------->
HVH21
--------->
ANAC58
<---------
MYB59
<---------
ARR14(2)
--------->
GLK1(2)
<---------
ALFIN1
<-----------
HVH21
--------->
ANAC46
<---------
bZIP60(1)
--------->
ANAC58
>>>>>>>>>>>>>>>>>
LFY
--------->
MYB46(3)
--------->
ANAC46
--------->
ANAC46
<---------
CCA1(2)
--------->
MYB46(3)
----------->
TGA1
<---------
DOF5.7(2)
tctcttcaattttctcatatattcttcccaatgtcacttcaaccaaacccaccaatagatccagtgacgccacagattctctctctgttaacgccacttc
2064000
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AGI:
At5g06700.1
Description:
similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G12060.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO23412.1); contains InterPro domain Protein of unknown function DUF231, plant (InterPro:IPR004253)
Range:
from: 2063488
to: 2066040
Orientation: Forward
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.