Home
Tools
- Search
- Colocalization
- Gene Analysis
- Gene Identification
- Small RNA Targets
- MicroRNA Targets
Description
Documentation
Citations
Downloads
Publications
History
Contact
Links
Disclaimer
For complete usage of AthaMap please enable JavaScript in the settings of your browser!
Search
Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
Go to graphical and table display
1 10 20 30 40 50 60 70 80 90 100
--------->
DEAR3(1)
<---------
DEAR3(1)
<---------
ANAC46
--------->
ARR14(2)
------>
ZmHOX2a(2)
----------------->
AGL1
<---------
ARR11(3)
<------
ZmHOX2a(2)
<-----------------
AGL1
--------->
ANAC55(2)
<---------
ARR14(2)
<---------
ICU4
<----------
DOF2
<---------
ANAC55(2)
--------->
ARR14(2)
--------->
YAB1
----------------->
AGL1
<---------
MYB52(1)
<---------
AGP1
--------->
ICU4
<-----------------
AGL1
<-----------
HVH21
<---------
CCA1(2)
<---------
ATHB12
--------->
ARR14(2)
-----
ZmHOX2a(2)
<---------
ARR14(1)
<---------
YAB1
<---------
ARR14(2)
----------
gatcccgttacgagatacttcatattcaaatcggatctgtatcgtcgacgagtaatcataacaatacccaaatcggaccgatttagggcaaacgagttat
1861300
----------->
GT1
------>
ZmHOX2a(2)
--------------->
AtSPL3
<------
ZmHOX2a(2)
--------------->
AtSPL8
--------->
ARR14(2)
<---------
ARR14(2)
<---------
ARR14(2)
--------->
ANAC58
------->
MYC3
--------->
LBD16
--------->
ANAC58
<-------
MYC3
----
<---------
LBD16
--------->
DAG2
<---------
LBD16
----
------>
MYB83
---------->
DOF2
--------->
ANAC46
------
------>
MYB46(1)
<---------
DEAR3(1)
<---------
GLK1(1)
--------
<---------
MYB59
<---------
ARR14(2)
<---------
ARR11(3)
--------->
YAB1
--------->
AtMYB61
------>
ZmHOX2a(2)
--------->
ARR11(3)
--------->
ANAC46
->
GT1
>>>>>>>>>>
MYB80
--------->
ARR14(2)
--------->
ICU4
--------->
ARR14(2)
--------
attcaagttaaacgaatcaaaccaaacccggattttagatcggcgtaatccaaaaagcaaagatttcacacgcggatcgtacatatatcaaacacaaccc
1861400
--------->
AHL20(2)
----->
ANAC58
--------->
YAB1
----->
ANAC58
<------
ZmHOX2a(2)
->
GAMYB
--------->
MYB52(1)
->
ANAC58
--------->
YAB1
--------->
TOE2(3)
<-------
TEIL
--
->
ANAC58
---------->
DOF2
<---------
ARR11(3)
--------->
AHL20(2)
--
agcaaaaaaatcaaatcgattcaaagaaatcaaaacaacgagatcaacgataacccagattaattcaaatcgattcatagaattaagaacgacgatatca
1861500
<-------
TEIL
<---------
YAB1
<---------
MYB52(1)
<------
NtERF2
<---------
TOE1(3)
---------->
ID1
<-----------
RAV1(2)
------>
NtERF2
<---------
YAB1
<---------
ANAC46
--------->
O2
<---------
GLK1(2)
<---------
ANAC58
<---------
O2
--------->
YAB1
<-----------------
AGL1
--------->
TGA1a
<--------
ATHB1
---------->
DOF2
<---------
ANAC58
<---------
TGA1a
--------->
ICU4
------->
TOE2(3)
----------->
HVH21
<---------
MYB52(1)
------>
ZmHOX2a(2)
<-----------
GT1
------->
YAB1
--------->
MYB46(3)
<---------------
AtSPL3
--------->
ICU4
<---------
ATHB12
acgataaacccattaaaagacgcgaagaacaaac
ctctgacttgttcaggtacgtttgctctcgtcgccat
gatcgctctcccaatgattcttactcttc
1861600
--------
--------->
DEAR3(2)
--------->
MYB46(3)
--------->
ATERF1(1)
<------
ZmHOX2a(1)
---------->
DOF2
--------->
ALFIN1
<---------
ANAC46
--------->
ATHB12
<---------
ANAC46
<------
ZmHOX2a(1)
<----------
DOF2
*
TSS
<------------
CBF
<---------
At4g35610
--------->
ATERF1(1)
<-----------
GT1
----------->
TGA1
<---------
At4g35610
--------->
ALFIN1
<---------
ARR11(3)
<---------
GLK1(2)
<---------
ANAC46
--------->
ZAT18
<------
ZmHOX2a(1)
--
ttgtttcttagtcttgatatttctctttcgtaaagagtctctgcgattgt
gacgaagattggaagcgagcgctgcttatgaagaggaggaggagccaacg
1861700
--------->
AHL20(2)
--------->
ATHB12
----------->
GT1
<---------
YAB1
<--------
P
<---------
MYB52(1)
--------->
MYB52(1)
<-------
GAMYB
------>
ZmHOX2a(2)
<-----------
HVH21
--------->
AGP1
<------
MYB83
--------->
At4g35610
<---------
AGP1
<------
MYB46(1)
<-----------
RAV1(1)
--------->
ARR11(3)
<---------
MYB46(3)
<---------
AHL20(2)
--------->
ARR14(2)
------->
GAMYB
<---------
At4g35610
<---------
AHL20(2)
<---------
ARR14(2)
--------->
MYB46(3)
--------->
GLK1(1)
<---------
At4g35610
----------->
HVH21
--------->
MYB52(1)
<---------
GLK1(1)
--------->
MYB52(2)
<------
ZmHOX2a(2)
->
MYB52(1)
<-----------
HVH21
----------->
RAV1(2)
--------->
AHL20(2)
<---------
MYB46(3)
-
---------->
CBF
<---------
LBD16
<---------
RAP2.6(3)
<---------
ARR11(3)
---
gttcaattccaacggtcatatttttggggatttcatctgttgccgttagatgattaaattttagatctaacggtggataggttagtcttcgaagttggaa
1861800
----------->
GT1
--------->
AHL20(2)
<---------------
AGL15
<------
<------
NtERF2
--------->
At5g28300
--------
------>
NtERF2
----------->
GT1
---------->
DOF2
<-------
<---------
ATERF1(2)
<---------
MYB52(1)
--------->
DAG2
--------
--------->
ATERF1(2)
<-------
GAMYB
===============================================
-------->
At4g35610
--------->
ZAT6
<---------
MYB46(3)
---------->
DOF2
--------->
TOE2(3)
------>
ZAT18
<-----------
GT1
------>
NtERF2
--------->
AHL20(2)
<----------
DOF2
-------
tgcgctggcactggataattttacactagtcatcgaatgaggccgttggactgtaaataaaaaaggtaaagcccatcccaacttttatttcttaattaaa
1861900
<---------
YAB1
---
AHL20(2)
----------->
GT1
----------------->
AG
->
AHL20(2)
---------->
DOF2
<---------
YAB1
<---------
AHL20(2)
--
AHL20(2)
<---------
YAB1
--------->
ICU4
<---------
AHL20(1)
->
YAB1
<---------
YAB1
<---------
AHL20(2)
<---------
TOE1(3)
--------->
AHL20(1)
========================================================
MADS_MADS
--------->
MYB59
--------->
AHL20(2)
-->
AHL20(2)
<---------
TOE2(3)
<---------
ICU4
----------->
GT1
<---------
TOE2(3)
<---------
AHL20(2)
attttggaatatgattaagaaaggaatatttcattattctttccaaaatagcaaaatgagattgtatgtttaggttttttgaaaacaaataaaatttgaa
1862000
--------->
YAB1
<---------
YAB1
<---------
AHL20(2)
<---------
AHL20(1)
--------->
AHL20(2)
--------->
YAB1
--------->
AHL20(2)
<---------
AHL20(2)
<---------
ARR11(3)
--------->
TOE2(3)
<------
--------->
ARR11(3)
----------->
GT1
---------
<---------
CCA1(2)
--------->
CCA1(1)
<---------
ARR11(3)
--------->
AHL20(2)
<---------
ARR14(2)
--------->
RVE1(1)
--------->
CCA1(1)
--------->
YAB1
--------->
ARR14(2)
--------->
AHL20(2)
--------->
RVE1(1)
--------->
AHL20(2)
<---------
ANAC46
----------->
HVH21
--------->
AHL20(2)
--------->
AHL20(1)
agtcttcgtatatggacatatatctgaccaaaatcaaatatctgtgtatttttcaaaaaaaaaaaatatcgtaaataaatataataaaaaaaaataaagg
1862100
<---------
AHL20(1)
--------->
AHL20(2)
--------->
TOE2(3)
------->
TEIL
<---------
YAB1
<----------
DOF2
--------->
ARR14(2)
--------->
AHL20(2)
<---------
ANAC58
<---------
ARR14(2)
<---------
ICU4
<---------
ANAC58
<---------
CCA1(2)
--------->
ICU4
----------->
HVH21
<---------
AHL20(2)
<---------
TOE1(3)
--------->
YAB1
---
TOE2(3)
--------->
At4g35610
<---------
TOE2(3)
<---------
YAB1
->
DOF2
<---------
At4g35610
<---------
TOE2(3)
<---------
AHL20(2)
---------->
DOF2
taaactatgtgatagcttactttaaaaaatttgacagtcgtatgaggtattgaggttgtatctgtttattttgataatttttataaagtttgactcaaat
1862200
Previous
Next
AGI:
At5g06150.1
Description:
CYC1BAT (CYCLIN B 1;2); cyclin-dependent protein kinase regulator. Identical to Cyclin-B1-2 (CYCB1-2) [Arabidopsis Thaliana] (GB:Q39067;GB:Q9FG02); similar to CYCB1,3 (CYCLIN B1,3), cyclin-dependent protein kinase regulator [Arabidopsis thaliana] (TAIR:AT3G11520.1); similar to mitotic cyclin [Sesbania rostrata] (GB:CAA99990.1); contains InterPro domain Cyclin (InterPro:IPR006670); contains InterPro domain Cyclin, A/B/D/E (InterPro:IPR014400); contains InterPro domain Cyclin, N-terminal (InterPro:IPR006671); contains InterPro domain Cyclin-like (InterPro:IPR011028); contains InterPro domain Cyclin, C-terminal; (InterPro:IPR004367)
Range:
from: 1859280
to: 1861650
Orientation: Reverse
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.
printer-friendly version