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   Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                         --------->DEAR3(1)
                                         <---------DEAR3(1)
                                      <---------ANAC46
                                    --------->ARR14(2)
                                ------>ZmHOX2a(2)             ----------------->AGL1
          <---------ARR11(3)   <------ZmHOX2a(2)              <-----------------AGL1
      --------->ANAC55(2)     <---------ARR14(2)    <---------ICU4           <----------DOF2
      <---------ANAC55(2)     --------->ARR14(2)    --------->YAB1       ----------------->AGL1
   <---------MYB52(1)         <---------AGP1       --------->ICU4        <-----------------AGL1
  <-----------HVH21          <---------CCA1(2)     <---------ATHB12--------->ARR14(2)
-----ZmHOX2a(2)              <---------ARR14(1)    <---------YAB1  <---------ARR14(2)     ----------
 
gatcccgttacgagatacttcatattcaaatcggatctgtatcgtcgacgagtaatcataacaatacccaaatcggaccgatttagggcaaacgagttat  1861300
                                                                         ----------->GT1
                                                                         ------>ZmHOX2a(2)
                                                                        --------------->AtSPL3
                                                                        <------ZmHOX2a(2)
                                                                        --------------->AtSPL8
                           --------->ARR14(2)                          <---------ARR14(2)
                           <---------ARR14(2)      --------->ANAC58------->MYC3
                         --------->LBD16           --------->ANAC58<-------MYC3                 ----
                       <---------LBD16            --------->DAG2   <---------LBD16              ----
                    ------>MYB83                 ---------->DOF2  --------->ANAC46            ------
                    ------>MYB46(1) <---------DEAR3(1)     <---------GLK1(1)                --------
                  <---------MYB59 <---------ARR14(2)      <---------ARR11(3)            --------->YAB1
                  --------->AtMYB61 ------>ZmHOX2a(2)     --------->ARR11(3)            --------->ANAC46
->GT1           >>>>>>>>>>MYB80   --------->ARR14(2)    --------->ICU4 --------->ARR14(2)   --------
 
attcaagttaaacgaatcaaaccaaacccggattttagatcggcgtaatccaaaaagcaaagatttcacacgcggatcgtacatatatcaaacacaaccc  1861400
  --------->AHL20(2)
----->ANAC58                                --------->YAB1
----->ANAC58                           <------ZmHOX2a(2)
->GAMYB                         --------->MYB52(1)
->ANAC58                  --------->YAB1    --------->TOE2(3)         <-------TEIL                --
->ANAC58          ---------->DOF2     <---------ARR11(3)--------->AHL20(2)                        --
 
agcaaaaaaatcaaatcgattcaaagaaatcaaaacaacgagatcaacgataacccagattaattcaaatcgattcatagaattaagaacgacgatatca  1861500
                                               <-------TEIL       <---------YAB1
                                             <---------MYB52(1)<------NtERF2
                                           <---------TOE1(3)---------->ID1
                                          <-----------RAV1(2) ------>NtERF2         <---------YAB1
                                    <---------ANAC46      --------->O2             <---------GLK1(2)
                                    <---------ANAC58      <---------O2            --------->YAB1
                                    <-----------------AGL1--------->TGA1a         <--------ATHB1
           ---------->DOF2          <---------ANAC58      <---------TGA1a        --------->ICU4
------->TOE2(3)                  ----------->HVH21<---------MYB52(1)  ------>ZmHOX2a(2) <-----------GT1
------->YAB1             --------->MYB46(3)<---------------AtSPL3 --------->ICU4 <---------ATHB12
 
acgataaacccattaaaagacgcgaagaacaaacctctgacttgttcaggtacgtttgctctcgtcgccatgatcgctctcccaatgattcttactcttc  1861600
                                                                                            --------
                                                                                          --------->DEAR3(2)
                                                                                          --------->MYB46(3)
                                                                                       --------->ATERF1(1)
                                                                                    <------ZmHOX2a(1)
                           ---------->DOF2                                        --------->ALFIN1
                        <---------ANAC46            --------->ATHB12  <---------ANAC46 <------ZmHOX2a(1)
                     <----------DOF2             *TSS<------------CBF<---------At4g35610  --------->ATERF1(1)
                <-----------GT1              ----------->TGA1     <---------At4g35610--------->ALFIN1
            <---------ARR11(3) <---------GLK1(2)<---------ANAC46--------->ZAT18  <------ZmHOX2a(1)--
 
ttgtttcttagtcttgatatttctctttcgtaaagagtctctgcgattgtgacgaagattggaagcgagcgctgcttatgaagaggaggaggagccaacg  1861700
                                                   --------->AHL20(2)
                                               --------->ATHB12
                                               ----------->GT1
                                              <---------YAB1                 <--------P
                                         <---------MYB52(1)     --------->MYB52(1)
                                        <-------GAMYB         ------>ZmHOX2a(2)
                                        <-----------HVH21   --------->AGP1 <------MYB83
                                  --------->At4g35610       <---------AGP1 <------MYB46(1)
                                 <-----------RAV1(1)        --------->ARR11(3)
                                 <---------MYB46(3)<---------AHL20(2)   --------->ARR14(2)
         ------->GAMYB         <---------At4g35610<---------AHL20(2)    <---------ARR14(2)
        --------->MYB46(3)--------->GLK1(1) <---------At4g35610----------->HVH21
      --------->MYB52(1)  <---------GLK1(1)--------->MYB52(2)<------ZmHOX2a(2)
->MYB52(1)<-----------HVH21    ----------->RAV1(2)--------->AHL20(2)  <---------MYB46(3)           -
---------->CBF       <---------LBD16    <---------RAP2.6(3) <---------ARR11(3)                   ---
 
gttcaattccaacggtcatatttttggggatttcatctgttgccgttagatgattaaattttagatctaacggtggataggttagtcttcgaagttggaa  1861800
                                                            ----------->GT1
                                                      --------->AHL20(2)
                                                     <---------------AGL15                   <------
   <------NtERF2                                --------->At5g28300                         --------
  ------>NtERF2                                ----------->GT1 ---------->DOF2              <-------
 <---------ATERF1(2)                     <---------MYB52(1)--------->DAG2                   --------
 --------->ATERF1(2)                    <-------GAMYB===============================================
-------->At4g35610 --------->ZAT6      <---------MYB46(3)---------->DOF2              --------->TOE2(3)
------>ZAT18     <-----------GT1     ------>NtERF2   --------->AHL20(2)       <----------DOF2-------
 
tgcgctggcactggataattttacactagtcatcgaatgaggccgttggactgtaaataaaaaaggtaaagcccatcccaacttttatttcttaattaaa  1861900
                             <---------YAB1
---AHL20(2)       ----------->GT1     ----------------->AG
->AHL20(2)     ---------->DOF2  <---------YAB1                                         <---------AHL20(2)
--AHL20(2)   <---------YAB1  --------->ICU4                                           <---------AHL20(1)
->YAB1 <---------YAB1     <---------AHL20(2)                       <---------TOE1(3)  --------->AHL20(1)
========================================================MADS_MADS  --------->MYB59    --------->AHL20(2)
-->AHL20(2)  <---------TOE2(3)<---------ICU4 ----------->GT1       <---------TOE2(3)  <---------AHL20(2)
 
attttggaatatgattaagaaaggaatatttcattattctttccaaaatagcaaaatgagattgtatgtttaggttttttgaaaacaaataaaatttgaa  1862000
                                                                              --------->YAB1
                                                                             <---------YAB1
                                                                             <---------AHL20(2)
                                                                            <---------AHL20(1)
                                                                            --------->AHL20(2)
                                                                           --------->YAB1
                                                                       --------->AHL20(2)
                                                                       <---------AHL20(2)
                                   <---------ARR11(3)             --------->TOE2(3)          <------
                                   --------->ARR11(3)            ----------->GT1           ---------
                <---------CCA1(2) --------->CCA1(1)            <---------ARR11(3)     --------->AHL20(2)
     <---------ARR14(2)           --------->RVE1(1)           --------->CCA1(1)  --------->YAB1
     --------->ARR14(2)       --------->AHL20(2)              --------->RVE1(1)  --------->AHL20(2)
  <---------ANAC46  ----------->HVH21                     --------->AHL20(2)--------->AHL20(1)
 
agtcttcgtatatggacatatatctgaccaaaatcaaatatctgtgtatttttcaaaaaaaaaaaatatcgtaaataaatataataaaaaaaaataaagg  1862100
                      <---------AHL20(1)
                      --------->AHL20(2)
                --------->TOE2(3)                      ------->TEIL         <---------YAB1
                <----------DOF2                        --------->ARR14(2)  --------->AHL20(2)
           <---------ANAC58                            <---------ARR14(2) <---------ICU4
           <---------ANAC58                           <---------CCA1(2)  --------->ICU4
     ----------->HVH21<---------AHL20(2)        <---------TOE1(3)   --------->YAB1
---TOE2(3)--------->At4g35610                   <---------TOE2(3)  <---------YAB1
->DOF2    <---------At4g35610           <---------TOE2(3)     <---------AHL20(2)---------->DOF2
 
taaactatgtgatagcttactttaaaaaatttgacagtcgtatgaggtattgaggttgtatctgtttattttgataatttttataaagtttgactcaaat  1862200
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AGI:  At5g06150.1   
Description:  CYC1BAT (CYCLIN B 1;2); cyclin-dependent protein kinase regulator. Identical to Cyclin-B1-2 (CYCB1-2) [Arabidopsis Thaliana] (GB:Q39067;GB:Q9FG02); similar to CYCB1,3 (CYCLIN B1,3), cyclin-dependent protein kinase regulator [Arabidopsis thaliana] (TAIR:AT3G11520.1); similar to mitotic cyclin [Sesbania rostrata] (GB:CAA99990.1); contains InterPro domain Cyclin (InterPro:IPR006670); contains InterPro domain Cyclin, A/B/D/E (InterPro:IPR014400); contains InterPro domain Cyclin, N-terminal (InterPro:IPR006671); contains InterPro domain Cyclin-like (InterPro:IPR011028); contains InterPro domain Cyclin, C-terminal; (InterPro:IPR004367)
Range:  from: 1859280    to: 1861650    Orientation: Reverse
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.