Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                         <---------ANAC58                                       <---------ANAC58                                    <----------DOF2                    ----------->RAV1(1)                              <<<<<<<<<MYB98                           <---------ALFIN1                              <---------MYB52(1)             <---------HSFB2a(1)    <---------ICU4           <-------GAMYB                  ------->TEIL                        <----    --------->YAB1          <---------ANAC58               <---------ARR11(3)                   ===== ------YAB1              --------->ARR14(2)              --------->ANAC58       <---------ARR11(3) ---YAB1 --------->ANAC55(2)<---------ANAC58             --------->ANAC58       --------->ARR11(3) -->GT1  <---------ANAC55(2)<---------ANAC46      --------->HSFB2a(2)------>ZmHOX2a(2) <---------MYB46(3)   ttacaaacatcacttatctccctcttggttccgttaggctttcttgtttcttcttgaacaagaacctttgatcccacatcaagaacttgttgttgacgat  1828800                                            <---------MYB46(3)                                         -------->HAHB4                       <-------GAMYB     --------->ATHB12                       <---------At4g35610 <---------YAB1                   <-----------HVH21     --------->YAB1                  <------MYB83           <--------ATHB1                  <------MYB46(1)        <---------ICU4               <---------ANAC46         --------->ICU4               <---------ANAC58       <---------ICU4          <---------REM1(1)           --------->YAB1          --------->ALFIN1           --------->ICU4                                    <-----------GT1      <------ZmHOX2a(1)--------->At4g35610 <---------WOX13(1)                         ----------->HVH21   <-----------RAV1(2)--------->MYB52(2)<---------YAB1                              <---------At4g35610 --ZmHOX2a(2)  <---------ANAC58 ----------->GT1            --------->ZAT2        <-------TEIL      <- ============HOX2a_HOX2a    <---------REM1(1)              <---------ZAT2    ------->TEIL          <-   cacattcaggaggtgtggcttggtcagttgatgaaggtgataatgattgttgtttgagtcgagctcggtctcttcgatgaacgttcatatgaccgcctag  1828900                                                                          --------->RAP2.6(2)                                                                          --------->DEAR3(1)                                                                          --------->ATERF1(2)                                                                          --------->ANAC46                                                                          --------->RAP2.3(2)                                                                          <---------ATERF1(2)                                                                          --------->RAP2.3(3)                                                                          --------->RRTF1(2)                                                                          --------->DREB2C(2)                                                                          --------->RRTF1(3)                                                                         --------->ORA47(2)                                                                         --------->ERF1                                                                         --------->ATERF1(1)                                                                         --------->RAP2.6(1)                                                                         --------->RRTF1(1)                                                                         --------->RAP2.3(1)                                                                        --------->ABI4(1)                                                                        --------->LBD16                                                                        --------->At4g35610                                                                        <---------ATERF1(1)                                                                    <---------ALFIN1                                                                    --------->DEAR3(1)                                                                 --------->AtMYB61       ------>NtERF2                                             <---------ALFIN1      --------->DREB2C(2)                                       <---------MYB111(2)      --------->RRTF1(3)                                   --------->ANAC58                  --------      --------->RAP2.3(3)                                  --------->AtLEC2                  --------      --------->DEAR3(1)                                   --------->ANAC46 <------NtERF2    --------      --------->RAP2.3(2)                                  --------->ANAC58------>NtERF2  -----------     --------->ORA47(2)                                   <-------MYC3  ------>NtERF2   --------->At4g35610     --------->DEAR3(2)          <-------TEIL             ------->MYC3  <---------At4g35610<---------TGA2(2)     --------->RAP2.3(1)      --------->At4g35610         ------->MYC2 --------->DEAR3(1) -----------     --------->ATERF1(1)   ---------->DOF2                <-------MYC2 <---------ALFIN1 --------->ZAT2     <------NtERF2      --------->LBD16              <------NtERF2  --------->AtMYB61   <---------ZAT2    <---------RAP2.3(1)--------->ANAC58             <---------ATERF1(1)--------->ANAC46 ----------->RAV1(2)    ------>NtERF2      --------->ANAC58             ------>NtERF2------->GAMYB <---------ALFIN1   <---------ANAC46    --------->LBD16          <---------DEAR3(1) --------->ZAT2       <---------At4g35610 --------ANAC58        --------->ANAC46     --------->ARR11(3)  <---------MYB55(2)    <-----------RAV1(2) --------ANAC58       <---------LBD16       <---------ARR11(3)  --------->MYB46(3)   ------>ZmHOX2a(1)   tgcttgcgccgacttgaactctctcccgcaaaagctgcatgagtaagacctcggtggccacatgcaaccacctccgccgccatactcctcagctgacgca  1829000                                                   <-----------HVH21                                                   <-----------TGA1                                                  --------->TGA1a                           ---------->DOF2        --------->bZIP60(2) ->ANAC58                  =================================bZIP_DOF ->ANAC58      --------->MYB52(1)                 --------->O2                              ------>ZmHOX2a(1) ->ANAC46  ----------------->AG                   <---------O2                     <---------ATHB12 >TGA1    ----------------->AGL1                 <------NtERF2        <-------TEIL--------->ANAC58 >HVH21   <-----------------AGL1       --------->LBD16 --------->MYB46(3)         --------->ANAC58---   aacgctctctcttccctaaacggccaaaataaagtcccatccgaagatggcctcgtcaccatcggtctaagcttcatcgacatcaagcattctcctctat  1829100                                                                                                   --           <---------ARR11(3)             <---------ANAC58                                         --           --------->ARR11(3)             <---------ANAC58                   <---------ZAT14      ---           <---------GLK1(2)         --------->DAG2                --------->ALFIN1            ------ --------->YAB1<-----------GT1       <---------TOE1(3)           <-----------RAV1(1)   *TSS    ------ ------>WOX13(1)                     <---------TOE2(3)     <---------AHL20(2)--------->ZAT14   ------   ccatcatatgtaagatttttctatgcagtagaagaagttaaggtgagtgttttttttgtgtttatttatgtgggagtagtgaagtatgtagatttagacg  1829200                                                                                                  ---                                                                                                 <---         ----------->TBP                                                                         ---- ------->ANAC58                                                                                 ----- ------->ANAC58      --------->ANAC58                                                           <---- ---->TEIL           --------->ANAC58                                                      --------->ANAC58 --->ANAC58        --------->CCA1(2)                                    ---------->DOF2    --------->ANAC58 --->ANAC58 ---------->DOF2       <---------TOE2(3)                 ----------->GT1      ---------->DOF2 --->ANAC46<---------AHL20(2)  --------->CCA1(2)        <---------ARR14(2)   <------------CBF   <----   cacgtagacttatataaagagagacgcatatagatagaggtatgtgtgtgtgtgtgtgtatatgactatatggttaaagcattgaatgtgagaaagcaac  1829300                                                       --------->MYB52(2)                                         <---------ARR11(3)                                         --------->ARR11(3)                                       --------->HSFB2a(1) ------>ALFIN1                         <---------HSFB2a(1) ----MYC3                              --------->HSFC1(2) --->MYC3                              <---------HSFC1(2)   <---------ANAC46                     ---- ---->O2                             ---------->DOF2--------->TOE2(3)  <---------ZAT14           <--- -----ANAC46                 ----------->HVH21      <----------DOF2    --------->ZAT14          <<<<< -----O2  ----------->GT1  <----------DOF2    <----------DOF2    <---------TOE1(2) ----------->GT1   gtggagaaccatgagtaaatagggagaggctttgatggggaaagttctcttttactttagttactcgtatgtcttcactctatacatgttaaatgtttag  1829400               <---------ANAC46             <------MYB83        <---------AHL20(2)     --------->YAB1     <---------ICU4     <--------ATHB1     --------->ATHB51     --------->ATHB12     <--------HAHB4                                    --------->ANAC58     -------->HAHB4                                    --------->ANAC55(1)    --------->ICU4                           <---------AHL20(2)    <---------YAB1        --------->ATHB12  <---------AHL20(2)    <---------ATHB51     <---------YAB1     --------->AHL20(2)    --------->AHL20(2)<----------DOF2    --------->AHL20(2)  --------->YAB1    <---------At4g35610 <---------AHL20(2)                             <---------AHL20(2) ----->ARR11(3)<---------ANAC58      ----------->GT1   --------->ANAC46  --------->O2  --------->AHL20(2) ------ARR11(3)<---------ANAC58   --------->YAB1       --------->ANAC58  --------->ANAC46 <<<<RAP2.2  <------MYB46(1)     <---------YAB1        --------->RAP2.6(2)            --------->AHL20(2)   atattaataattagttggtgtgagcttttgatttgataatagttaaattaatgccagacgcaacttaagttttccacgagtctacaaaattaataagtca  1829500                             --------->YAB1                             <---------AHL20(2)                       <---------At4g35610                   --------->ANAC58                   <---------ANAC55(2)                   --------->ANAC55(2)                   --------->ANAC55(1)                                    <---------AHL20(2)                   --------->ANAC46                        <---------ARR11(3)                   <---------O2  <----------ID1            --------->ARR11(3)   <---------ANAC46                   --------->ANAC58           ----------->GT1      <-----------GT1           <-------            --------->YAB1   --------->AHL20(2)   <---------AHL20(2)     --------->AHL20(2)  --------    <---------RVE1(1) ------->TEIL           <---------TOE2(3)     --------->YAB1          <---------   gagtcgatattttctaataacacgtagctaataatatgacaaaaactatggtttaatttgaaatctttataacaattttatggagtctaaaatatacacc  1829600                                                                     <---------AHL20(2)                                                                     --------->AHL20(1)                                                                     <---------AHL20(1)                                                                    --------->AHL20(2)                                           --------->PCF2       --------->AHL20(2)                       <-----------RAV1(1) ------>NtERF2        <---------AHL20(2)                  -                       ===========================RAV        --------->ATHB12                      <-                      ------->TEIL    <-----------RAV1(2)   <---------YAB1                         <-            --------->ATHB12          =====================RAV <---------WOX13(1)                  <-     --------->At4g35610             <-------TEIL       <---------WOX13(1)      <---------At4g35610<- ----GT1    --------->YAB1  <---------ANAC46     --------->MYB46(3) <---------AHL20(2)             <- ->ANAC46  <---------HSFC1(2)     <---------ANAC46    --------->ATHB12    --------->ATHB12        <-- --GT1     <---------HSFB2a(1)<-----------HVH21----------->RAV1(1)  --------->YAB1                ---   atatatcatcggaatcatcggatgtatgtggctgtgaggtacaggggcccaacaattgatttatgattaattatattgatttagctaattagacaatgga  1829700  Previous    Next  AGI:  At5g06070.1    Description:  RBE (RABBIT EARS); nucleic acid binding / transcription factor/ zinc ion binding. Identical to Probable transcriptional regulator RABBIT EARS (RBE) [Arabidopsis Thaliana] (GB:Q9LHS9); similar to zinc finger (C2H2 type) family protein [Arabidopsis thaliana] (TAIR:AT2G37740.1); similar to SUPERMAN-like zinc finger protein [Gossypium hirsutum] (GB:AAZ79470.2); contains InterPro domain Zinc finger, C2H2-like; (InterPro:IPR015880); contains InterPro domain Zinc finger, C2H2-type; (InterPro:IPR007087) Range:  from: 1828151    to: 1829187    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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