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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
<---------
ANAC58
<---------
ANAC58
<----------
DOF2
----------->
RAV1(1)
<<<<<<<<<
MYB98
<---------
ALFIN1
<---------
MYB52(1)
<---------
HSFB2a(1)
<---------
ICU4
<-------
GAMYB
------->
TEIL
<----
--------->
YAB1
<---------
ANAC58
<---------
ARR11(3)
=====
------
YAB1
--------->
ARR14(2)
--------->
ANAC58
<---------
ARR11(3)
---
YAB1
--------->
ANAC55(2)
<---------
ANAC58
--------->
ANAC58
--------->
ARR11(3)
-->
GT1
<---------
ANAC55(2)
<---------
ANAC46
--------->
HSFB2a(2)
------>
ZmHOX2a(2)
<---------
MYB46(3)
ttacaaacatcacttatctccctcttggttccgttaggctttcttgtttcttcttgaacaagaacctttgatcccacatcaagaacttgttgttgacgat
1828800
<---------
MYB46(3)
-------->
HAHB4
<-------
GAMYB
--------->
ATHB12
<---------
At4g35610
<---------
YAB1
<-----------
HVH21
--------->
YAB1
<------
MYB83
<--------
ATHB1
<------
MYB46(1)
<---------
ICU4
<---------
ANAC46
--------->
ICU4
<---------
ANAC58
<---------
ICU4
<---------
REM1(1)
--------->
YAB1
--------->
ALFIN1
--------->
ICU4
<-----------
GT1
<------
ZmHOX2a(1)
--------->
At4g35610
<---------
WOX13(1)
----------->
HVH21
<-----------
RAV1(2)
--------->
MYB52(2)
<---------
YAB1
<---------
At4g35610
--
ZmHOX2a(2)
<---------
ANAC58
----------->
GT1
--------->
ZAT2
<-------
TEIL
<-
============
HOX2a_HOX2a
<---------
REM1(1)
<---------
ZAT2
------->
TEIL
<-
cacattcaggaggtgtggcttggtcagttgatgaaggtgataatgattgttgtttgagtcgagctcggtctcttcgatgaacgttcatatgaccgcctag
1828900
--------->
RAP2.6(2)
--------->
DEAR3(1)
--------->
ATERF1(2)
--------->
ANAC46
--------->
RAP2.3(2)
<---------
ATERF1(2)
--------->
RAP2.3(3)
--------->
RRTF1(2)
--------->
DREB2C(2)
--------->
RRTF1(3)
--------->
ORA47(2)
--------->
ERF1
--------->
ATERF1(1)
--------->
RAP2.6(1)
--------->
RRTF1(1)
--------->
RAP2.3(1)
--------->
ABI4(1)
--------->
LBD16
--------->
At4g35610
<---------
ATERF1(1)
<---------
ALFIN1
--------->
DEAR3(1)
--------->
AtMYB61
------>
NtERF2
<---------
ALFIN1
--------->
DREB2C(2)
<---------
MYB111(2)
--------->
RRTF1(3)
--------->
ANAC58
--------
--------->
RAP2.3(3)
--------->
AtLEC2
--------
--------->
DEAR3(1)
--------->
ANAC46
<------
NtERF2
--------
--------->
RAP2.3(2)
--------->
ANAC58
------>
NtERF2
-----------
--------->
ORA47(2)
<-------
MYC3
------>
NtERF2
--------->
At4g35610
--------->
DEAR3(2)
<-------
TEIL
------->
MYC3
<---------
At4g35610
<---------
TGA2(2)
--------->
RAP2.3(1)
--------->
At4g35610
------->
MYC2
--------->
DEAR3(1)
-----------
--------->
ATERF1(1)
---------->
DOF2
<-------
MYC2
<---------
ALFIN1
--------->
ZAT2
<------
NtERF2
--------->
LBD16
<------
NtERF2
--------->
AtMYB61
<---------
ZAT2
<---------
RAP2.3(1)
--------->
ANAC58
<---------
ATERF1(1)
--------->
ANAC46
----------->
RAV1(2)
------>
NtERF2
--------->
ANAC58
------>
NtERF2
------->
GAMYB
<---------
ALFIN1
<---------
ANAC46
--------->
LBD16
<---------
DEAR3(1)
--------->
ZAT2
<---------
At4g35610
--------
ANAC58
--------->
ANAC46
--------->
ARR11(3)
<---------
MYB55(2)
<-----------
RAV1(2)
--------
ANAC58
<---------
LBD16
<---------
ARR11(3)
--------->
MYB46(3)
------>
ZmHOX2a(1)
tgcttgcgccgacttgaactctctcccgcaaaagctgcatgagtaagacctcggtggccacatgcaaccacctccgccgccatactcctcagctgacgca
1829000
<-----------
HVH21
<-----------
TGA1
--------->
TGA1a
---------->
DOF2
--------->
bZIP60(2)
->
ANAC58
=================================
bZIP_DOF
->
ANAC58
--------->
MYB52(1)
--------->
O2
------>
ZmHOX2a(1)
->
ANAC46
----------------->
AG
<---------
O2
<---------
ATHB12
>
TGA1
----------------->
AGL1
<------
NtERF2
<-------
TEIL
--------->
ANAC58
>
HVH21
<-----------------
AGL1
--------->
LBD16
--------->
MYB46(3)
--------->
ANAC58
---
aacgctctctcttccctaaacggccaaaataaagtcccatccgaagatggcctcgtcaccatcggtctaagcttcatcgacatcaagcattctcctctat
1829100
--
<---------
ARR11(3)
<---------
ANAC58
--
--------->
ARR11(3)
<---------
ANAC58
<---------
ZAT14
---
<---------
GLK1(2)
--------->
DAG2
--------->
ALFIN1
------
--------->
YAB1
<-----------
GT1
<---------
TOE1(3)
<-----------
RAV1(1)
*
TSS
------
------>
WOX13(1)
<---------
TOE2(3)
<---------
AHL20(2)
--------->
ZAT14
------
ccatcat
atgtaagatttttctatgcagtagaagaagttaaggtgagtgttttttttgtgtttatttatgtgggagtagtgaagtat
gtagatttagacg
1829200
---
<---
----------->
TBP
----
------->
ANAC58
-----
------->
ANAC58
--------->
ANAC58
<----
---->
TEIL
--------->
ANAC58
--------->
ANAC58
--->
ANAC58
--------->
CCA1(2)
---------->
DOF2
--------->
ANAC58
--->
ANAC58
---------->
DOF2
<---------
TOE2(3)
----------->
GT1
---------->
DOF2
--->
ANAC46
<---------
AHL20(2)
--------->
CCA1(2)
<---------
ARR14(2)
<------------
CBF
<----
cacgtagacttatataaagagagacgcatatagatagaggtatgtgtgtgtgtgtgtgtatatgactatatggttaaagcattgaatgtgagaaagcaac
1829300
--------->
MYB52(2)
<---------
ARR11(3)
--------->
ARR11(3)
--------->
HSFB2a(1)
------>
ALFIN1
<---------
HSFB2a(1)
----
MYC3
--------->
HSFC1(2)
--->
MYC3
<---------
HSFC1(2)
<---------
ANAC46
----
---->
O2
---------->
DOF2
--------->
TOE2(3)
<---------
ZAT14
<---
-----
ANAC46
----------->
HVH21
<----------
DOF2
--------->
ZAT14
<<<<<
-----
O2
----------->
GT1
<----------
DOF2
<----------
DOF2
<---------
TOE1(2)
----------->
GT1
gtggagaaccatgagtaaatagggagaggctttgatggggaaagttctcttttactttagttactcgtatgtcttcactctatacatgttaaatgtttag
1829400
<---------
ANAC46
<------
MYB83
<---------
AHL20(2)
--------->
YAB1
<---------
ICU4
<--------
ATHB1
--------->
ATHB51
--------->
ATHB12
<--------
HAHB4
--------->
ANAC58
-------->
HAHB4
--------->
ANAC55(1)
--------->
ICU4
<---------
AHL20(2)
<---------
YAB1
--------->
ATHB12
<---------
AHL20(2)
<---------
ATHB51
<---------
YAB1
--------->
AHL20(2)
--------->
AHL20(2)
<----------
DOF2
--------->
AHL20(2)
--------->
YAB1
<---------
At4g35610
<---------
AHL20(2)
<---------
AHL20(2)
----->
ARR11(3)
<---------
ANAC58
----------->
GT1
--------->
ANAC46
--------->
O2
--------->
AHL20(2)
------
ARR11(3)
<---------
ANAC58
--------->
YAB1
--------->
ANAC58
--------->
ANAC46
<<<<
RAP2.2
<------
MYB46(1)
<---------
YAB1
--------->
RAP2.6(2)
--------->
AHL20(2)
atattaataattagttggtgtgagcttttgatttgataatagttaaattaatgccagacgcaacttaagttttccacgagtctacaaaattaataagtca
1829500
--------->
YAB1
<---------
AHL20(2)
<---------
At4g35610
--------->
ANAC58
<---------
ANAC55(2)
--------->
ANAC55(2)
--------->
ANAC55(1)
<---------
AHL20(2)
--------->
ANAC46
<---------
ARR11(3)
<---------
O2
<----------
ID1
--------->
ARR11(3)
<---------
ANAC46
--------->
ANAC58
----------->
GT1
<-----------
GT1
<-------
--------->
YAB1
--------->
AHL20(2)
<---------
AHL20(2)
--------->
AHL20(2)
--------
<---------
RVE1(1)
------->
TEIL
<---------
TOE2(3)
--------->
YAB1
<---------
gagtcgatattttctaataacacgtagctaataatatgacaaaaactatggtttaatttgaaatctttataacaattttatggagtctaaaatatacacc
1829600
<---------
AHL20(2)
--------->
AHL20(1)
<---------
AHL20(1)
--------->
AHL20(2)
--------->
PCF2
--------->
AHL20(2)
<-----------
RAV1(1)
------>
NtERF2
<---------
AHL20(2)
-
===========================
RAV
--------->
ATHB12
<-
------->
TEIL
<-----------
RAV1(2)
<---------
YAB1
<-
--------->
ATHB12
=====================
RAV
<---------
WOX13(1)
<-
--------->
At4g35610
<-------
TEIL
<---------
WOX13(1)
<---------
At4g35610
<-
----
GT1
--------->
YAB1
<---------
ANAC46
--------->
MYB46(3)
<---------
AHL20(2)
<-
->
ANAC46
<---------
HSFC1(2)
<---------
ANAC46
--------->
ATHB12
--------->
ATHB12
<--
--
GT1
<---------
HSFB2a(1)
<-----------
HVH21
----------->
RAV1(1)
--------->
YAB1
---
atatatcatcggaatcatcggatgtatgtggctgtgaggtacaggggcccaacaattgatttatgattaattatattgatttagctaattagacaatgga
1829700
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AGI:
At5g06070.1
Description:
RBE (RABBIT EARS); nucleic acid binding / transcription factor/ zinc ion binding. Identical to Probable transcriptional regulator RABBIT EARS (RBE) [Arabidopsis Thaliana] (GB:Q9LHS9); similar to zinc finger (C2H2 type) family protein [Arabidopsis thaliana] (TAIR:AT2G37740.1); similar to SUPERMAN-like zinc finger protein [Gossypium hirsutum] (GB:AAZ79470.2); contains InterPro domain Zinc finger, C2H2-like; (InterPro:IPR015880); contains InterPro domain Zinc finger, C2H2-type; (InterPro:IPR007087)
Range:
from: 1828151
to: 1829187
Orientation: Reverse
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.