Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                      <----------DOF2                  <---------At4g35610                  --------->At4g35610           --------->YAB1                                   --------->ANAC58          <---------YAB1                             <---------------AGL15        <---------ICU4                        --------->ARR11(3)       <---------YAB1    <---------WOX13(1)   <---------ARR11(3)         <----------DOF2       --------->ICU4  --------->ATHB12      <---------CCA1(2)      ---------->DOF2 --------->DOF2   --------->ZAT2  <---------ZAT6     --------------->AGL15 ---DOF2--------->YAB1<---------YAB1     ----------->GT1    --------->ANAC58                    -----   gtcaaagtgattatgatcacagctttcattgatggagtcttaaatgtaaatcttacaaaatcaagaaatgaaaagctttgtctctgcttgaaaacatgaa  1716500                                                                                              <------                                                                                              -------                                                                                             ------>MYB46(1)                                                                                             ------>MYB83                                                                                           <---------                                                                                           <---------MYB59                                                                                           ----------                                                                                          -----------                                                                                          <----------                                                                                          <----------                                                                                          <----------                                                                                          -----------      --------->LBD16                                                                     -----------     --------->ANAC46                                                                     -----------  <---------ARR14(2)                                                                      <----------  --------->ARR14(2)         ------>MYB83                                                -------->P --------->GLK1(1)           ------>MYB46(1)                                             ============ <---------CCA1(2)         --------->TOE2(3)                                            <-----------GT1 <---------GLK1(1)         <---------MYB59<---------WRKY38(1)                        ------->TEIL --- -->TEIL       --------->AHL20(2)         <---------WRKY12                       <---------------AtSPL8   ctcatatccgaaaaacatataatataaaacctaattcttcaagggcaacgcttctggttcaaagacttatatggttcttcaaacatgtacttaccaaata  1716600                        ------->MYC3                        <-------MYC2                        ------->MYC2                        <-------PIF4                        <-------PIF5                        <-------MYC3        ------------>CBF------->PIF5       --------->ANAC58 ------->PIF4       --------->ANAC58 ------->MYC4 ---ARR14(2)            <-------MYC4 -->ARR14(2)           --------->ANAC46 ------AGL15           --------->TGA1a ----->AGL15           <---------ANAC55(2) ------>AG             --------->ANAC55(2)                                                 <---------ANAC55(1) -------AGL1           --------->ANAC58                                             <-----------TGA1 -------AG             <---------TGA1a                                    --------->HSFC1(2) -------AGL3           --------->ANAC58                                   ----------->ARR10<---------ANAC55(2) ------>AGL1         <------------OsbHLH66                                <---------HSFC1(2) ------>AGL3    <----------DOF2                                           --------->HSFB2a(1) ------>AGL2    =================bZIP_DOF                               ---------->DOF2    --------->ANAC55(2) -------AGL2   <---------DAG2          <---------ARR11(3)      <---------AtLEC2 ------>ZmHOX2a(1) ================================MYC_MYB        <---------SPL7<-------TEIL<---------HSFB2a(1)     --- -------->GT1<---------ARR11(3)   ------------>CBF--------->SPL7------->TEIL--------->ARR14(2)-------   tggtaacagaagcaataccttttgcacgtgatcaaatacaataacttcgtcgtacagactaagatgcatgtatggaaagttcctctcgtcattaagtgtc  1716700                               <---------HSFB2a(2)              ----------------->AGL1      ------>MYB83             --------->HSFB2a(2)      ------>MYB46(1)       --------->ARR14(2)        ---------->DOF2      -------->P            <---------ARR14(2)     <---------MYB59------>ZmHOX2a(1)   <---------ETT(1)      --------->MYB52(1)  --------->LBD16          --------->TOE2(3)       <<<<<<<<<TBF1 <---------ALFIN1 --->ZmHOX2a(1)         <---------LBD16           <---------ANAC55(2)   <<<<<<<<<TBF1 --------->ANAC46 -->ZAT18--------->ANAC46 <------NtERF2  ----------->RAV1(1)<---------ALFIN1     ------>ZmHOX2a(1)   ctaaaccctacccgcttccattcagggccgggtctggaaggaacaacaaaatacctaaaacccctctcctcttcttcttcttcctagtccgacactctta  1716800                                                                                         ----------->RAV1(1)                                                                                      --------->ANAC46                                                                                 <---------GLK1(1)                     ----------->GT1                    --------->TOE2(3)      --------->ATHB12           <------------CBF                             --------->TOE1(3)     --------->ICU4       <-          <---------ICU4                         --------->YAB1           --------->ICU4--------->ANAC46   gagtcttcaaaaacattgcaagaaggaaacaaaatccatcttcttcgtctattagaaaccctaacttgagaatgtaagtattgatttcccacaacagttt  1716900                                                 <---------ARR11(3)                  <------MYB83                 --------->ANAC58                  <------MYB46(1)              ----------->GT1          <-----------------AG                 --------->ANAC58          <---------HSFB2a(2)      <----------DOF2   --------->At4g35610--------->ANAC58              --------->HSFB2a(2)     --------->TOE2(3)  <---------At4g35610--------->ANAC58        ------>NtERF2<-----------GT1   ---------->ID1--------->MYB59 --------->WOX13(1)              <---------RAP2.6(2) --------->ARR11(3) ---------DOF2   <---------TOE2(3) <---------ATHB12   <---------AHL20(2) ----------->GT1          ---   tctttttcctttaactaattaggtttagcagaaaacaatcaatgtaggcaagttatttttttttgtttcggccttctgtaaattacaggtcttggataat  1717000      <---------HSFB2a(1)      --------->HSFB2a(1)      --------->HSFC1(2)                                                   --------->TGA1a      <---------HSFC1(2)                                   --------->DAG2  <---------TGA1a     <-----------ARR10                                    ---------->DOF2  <---------ANAC46       <--     --------->ARR11(3)                                   ===========================bZIP_DOF  ------     --------->GLK1(2)                                 --------->ANAC46    ----------->GT1    -------     <---------ARR11(3)                                --------->ANAC58    ==========================     --------->ARR14(2)        <------ZmHOX2a(1)       --------->ANAC58    <---------O2       <------     <---------ARR14(2)----------->HVH21         ====================================bZIP_DOF -------    <---------GLK1(2) <-----------HVH21          <----------DOF2        --------->DEAR3(1)  ---------  <---------TOE2(3)  <---------ANAC55(2) <---------HSFB2a(2) <----------ID1--------->O2 <---------ANAC46 ------>TOE2(3)   <---------ATHB12       --------->HSFB2a(2) ----------->GT1            ----------->GT1   cgttaagaatcttccttccaaacatgtgacagaggaacgacttcgagatgtcttttcacgaaaaggagaaatcgcagacgtgaaattgaagcgtaaaagg  1717100                                                                                                    <                                                                                                    <                                                                                                 <--- -----TEIL                                                                                      <---- ----->GT1                                                                                      <---- -------->AtSPL8              <---------ANAC58         <----------DOF2                 -------------- ==bZIP_DOF            --------->At4g35610            <---------ANAC58                 <------------- ---------AtSPL8       <---------At4g35610            <---------ANAC58                <---------ANAC46 -->DAG2           <-----------GT1             <---------ANAC58         --------->DAG2<---------ANAC58 ->DOF2    >>>>>>>>>TAC1      <---------ANAC58 <---------ANAC58        ---------->DOF2<---------ANAC58   tacattcaaatcgagtgtttttcacagctaattcttgtgtcactatatttcgttttgcttttgcagtgatggcaaaagtagacaatttgcttatattggc  1717200                                                                            <---------TOE1(3)                                                                            <---------TOE2(3)                                                                    <---------ARR14(2)                                                                    <---------ARR11(3) <---------SPL7                                                     --------->ARR14(2) ---------ANAC58                                                    --------->ARR11(3) ---------ANAC58                                                   --------->GLK1(1) -------DOF2                                              <---------ANAC55(2)     <---------YAB1 -----ANAC58                                              --------->ANAC55(2)----------->GT1  ------- -----ANAC58                                          --------->YAB1--------->GLK1(2)  --------->YAB1 ->AGL15              <---------ARR11(3)            <---------WOX13(1) <-----------RAV1(1)  --------- --AGL15       --------->At4g35610                --------->ATHB12 <---------GLK1(1)   <---------ICU4   tttcgtactgaacaagaagctcaagatgctatcacatatgttaacaagtgtttcattgatacttatcgaatatctgttgaggttattaatcttcacttaa  1717300                                                                          ------>ZmHOX2a(1)                                                                      <---------ALFIN1                                                                    <---------ATERF1(1)                                                                   --------->TCP16(1)                                                                   --------->PCF2                                                                   <---------ARR14(2)                                                                   --------->SPL7                                                                   --------->PCF5                                                                  ------>NtERF2                                                                 <---------ZAT18                                                                <---------ANAC58                                              <---------YAB1    <---------ANAC58                                           --------->GLK1(2)    <---------ANAC46                                          <---------ARR14(2)   <---------At4g35610                 --                                          --------->ARR14(2)   <---------LBD16                   <---                                 --------->TOE2(3)<---------TOE1(2)--------->ARR14(2)       --------- -->AHL20(2)    --------------->AtSPL8    <---------GLK1(2)    --------->At4g35610          <------MYB83 >ANAC55(2)     <---------------AtSPL8  ----------->ARR10 <---------TOE2(3)  --------->LBD16<------MYB46(1)   ttactcagtttcacttatgtagtactagtttcaaatctaaatcagattctccttggtatataggttgcggaccctcctccgagggaagaagggaaggtta  1717400  Previous    Next  AGI:  At5g05710.1    Description:  pleckstrin homology (PH) domain-containing protein. similar to ATPH1 (ARABIDOPSIS THALIANA PLECKSTRIN HOMOLOGUE 1) [Arabidopsis thaliana] (TAIR:AT2G29700.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41338.1); contains InterPro domain Pleckstrin-like (InterPro:IPR001849); contains InterPro domain Pleckstrin homology-type (InterPro:IPR011993) Range:  from: 1715876    to: 1716500    Orientation: Forward Links:  TAIR  MIPS    AGI:  At5g05720.1    Description:  RNA recognition motif (RRM)-containing protein. similar to RNA binding [Arabidopsis thaliana] (TAIR:AT4G19610.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41920.1); contains InterPro domain RNA recognition motif, RNP-1; (InterPro:IPR000504); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677) Range:  from: 1716872    to: 1719542    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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