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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
<----------
DOF2
<---------
At4g35610
--------->
At4g35610
--------->
YAB1
--------->
ANAC58
<---------
YAB1
<---------------
AGL15
<---------
ICU4
--------->
ARR11(3)
<---------
YAB1
<---------
WOX13(1)
<---------
ARR11(3)
<----------
DOF2
--------->
ICU4
--------->
ATHB12
<---------
CCA1(2)
---------->
DOF2
--------->
DOF2
--------->
ZAT2
<---------
ZAT6
--------------->
AGL15
---
DOF2
--------->
YAB1
<---------
YAB1
----------->
GT1
--------->
ANAC58
-----
gtcaaagtgattatgatcacagctttcattgatggagtcttaaatgtaaatcttacaaaatcaagaaatgaaaagctttgtctctgcttgaaaacatgaa
1716500
<------
-------
------>
MYB46(1)
------>
MYB83
<---------
<---------
MYB59
----------
-----------
<----------
<----------
<----------
-----------
--------->
LBD16
-----------
--------->
ANAC46
-----------
<---------
ARR14(2)
<----------
--------->
ARR14(2)
------>
MYB83
-------->
P
--------->
GLK1(1)
------>
MYB46(1)
============
<---------
CCA1(2)
--------->
TOE2(3)
<-----------
GT1
<---------
GLK1(1)
<---------
MYB59
<---------
WRKY38(1)
------->
TEIL
---
-->
TEIL
--------->
AHL20(2)
<---------
WRKY12
<---------------
AtSPL8
ctcatatccgaaaaacatataatataaaacctaattcttcaagggcaacgcttctggttcaaagacttatatggttcttcaaacatgtacttaccaaata
1716600
------->
MYC3
<-------
MYC2
------->
MYC2
<-------
PIF4
<-------
PIF5
<-------
MYC3
------------>
CBF
------->
PIF5
--------->
ANAC58
------->
PIF4
--------->
ANAC58
------->
MYC4
---
ARR14(2)
<-------
MYC4
-->
ARR14(2)
--------->
ANAC46
------
AGL15
--------->
TGA1a
----->
AGL15
<---------
ANAC55(2)
------>
AG
--------->
ANAC55(2)
<---------
ANAC55(1)
-------
AGL1
--------->
ANAC58
<-----------
TGA1
-------
AG
<---------
TGA1a
--------->
HSFC1(2)
-------
AGL3
--------->
ANAC58
----------->
ARR10
<---------
ANAC55(2)
------>
AGL1
<------------
OsbHLH66
<---------
HSFC1(2)
------>
AGL3
<----------
DOF2
--------->
HSFB2a(1)
------>
AGL2
=================
bZIP_DOF
---------->
DOF2
--------->
ANAC55(2)
-------
AGL2
<---------
DAG2
<---------
ARR11(3)
<---------
AtLEC2
------>
ZmHOX2a(1)
================================
MYC_MYB
<---------
SPL7
<-------
TEIL
<---------
HSFB2a(1)
---
-------->
GT1
<---------
ARR11(3)
------------>
CBF
--------->
SPL7
------->
TEIL
--------->
ARR14(2)
-------
tggtaacagaagcaataccttttgcacgtgatcaaatacaataacttcgtcgtacagactaagatgcatgtatggaaagttcctctcgtcattaagtgtc
1716700
<---------
HSFB2a(2)
----------------->
AGL1
------>
MYB83
--------->
HSFB2a(2)
------>
MYB46(1)
--------->
ARR14(2)
---------->
DOF2
-------->
P
<---------
ARR14(2)
<---------
MYB59
------>
ZmHOX2a(1)
<---------
ETT(1)
--------->
MYB52(1)
--------->
LBD16
--------->
TOE2(3)
<<<<<<<<<
TBF1
<---------
ALFIN1
--->
ZmHOX2a(1)
<---------
LBD16
<---------
ANAC55(2)
<<<<<<<<<
TBF1
--------->
ANAC46
-->
ZAT18
--------->
ANAC46
<------
NtERF2
----------->
RAV1(1)
<---------
ALFIN1
------>
ZmHOX2a(1)
ctaaaccctacccgcttccattcagggccgggtctggaaggaacaacaaaatacctaaaacccctctcctcttcttcttcttcctagtccgacactctta
1716800
----------->
RAV1(1)
--------->
ANAC46
<---------
GLK1(1)
----------->
GT1
--------->
TOE2(3)
--------->
ATHB12
<------------
CBF
--------->
TOE1(3)
--------->
ICU4
<-
<---------
ICU4
--------->
YAB1
--------->
ICU4
--------->
ANAC46
gagtcttcaaaaacattgcaagaaggaaacaaaatccatcttcttcgtctattagaaaccctaacttgaga
at
gtaagtattgatttcccacaacagttt
1716900
<---------
ARR11(3)
<------
MYB83
--------->
ANAC58
<------
MYB46(1)
----------->
GT1
<-----------------
AG
--------->
ANAC58
<---------
HSFB2a(2)
<----------
DOF2
--------->
At4g35610
--------->
ANAC58
--------->
HSFB2a(2)
--------->
TOE2(3)
<---------
At4g35610
--------->
ANAC58
------>
NtERF2
<-----------
GT1
---------->
ID1
--------->
MYB59
--------->
WOX13(1)
<---------
RAP2.6(2)
--------->
ARR11(3)
---------
DOF2
<---------
TOE2(3)
<---------
ATHB12
<---------
AHL20(2)
----------->
GT1
---
tctttttcctttaactaattaggtttagcagaaaacaatcaatgtaggcaagttatttttttttgtttcggccttctgtaaattacag
gtcttggataat
1717000
<---------
HSFB2a(1)
--------->
HSFB2a(1)
--------->
HSFC1(2)
--------->
TGA1a
<---------
HSFC1(2)
--------->
DAG2
<---------
TGA1a
<-----------
ARR10
---------->
DOF2
<---------
ANAC46
<--
--------->
ARR11(3)
===========================
bZIP_DOF
------
--------->
GLK1(2)
--------->
ANAC46
----------->
GT1
-------
<---------
ARR11(3)
--------->
ANAC58
==========================
--------->
ARR14(2)
<------
ZmHOX2a(1)
--------->
ANAC58
<---------
O2
<------
<---------
ARR14(2)
----------->
HVH21
====================================
bZIP_DOF
-------
<---------
GLK1(2)
<-----------
HVH21
<----------
DOF2
--------->
DEAR3(1)
---------
<---------
TOE2(3)
<---------
ANAC55(2)
<---------
HSFB2a(2)
<----------
ID1
--------->
O2
<---------
ANAC46
------>
TOE2(3)
<---------
ATHB12
--------->
HSFB2a(2)
----------->
GT1
----------->
GT1
cgttaagaatcttccttccaaacatgtgacagaggaacgacttcgagatgtcttttcacgaaaaggagaaatcgcagacgtgaaattgaagcgtaaaag
g
1717100
<
<
<---
-----
TEIL
<----
----->
GT1
<----
-------->
AtSPL8
<---------
ANAC58
<----------
DOF2
--------------
==
bZIP_DOF
--------->
At4g35610
<---------
ANAC58
<-------------
---------
AtSPL8
<---------
At4g35610
<---------
ANAC58
<---------
ANAC46
-->
DAG2
<-----------
GT1
<---------
ANAC58
--------->
DAG2
<---------
ANAC58
->
DOF2
>>>>>>>>>
TAC1
<---------
ANAC58
<---------
ANAC58
---------->
DOF2
<---------
ANAC58
tacattcaaatcgagtgtttttcacagctaattcttgtgtcactatatttcgttttgcttttgcag
tgatggcaaaagtagacaatttgcttatattggc
1717200
<---------
TOE1(3)
<---------
TOE2(3)
<---------
ARR14(2)
<---------
ARR11(3)
<---------
SPL7
--------->
ARR14(2)
---------
ANAC58
--------->
ARR11(3)
---------
ANAC58
--------->
GLK1(1)
-------
DOF2
<---------
ANAC55(2)
<---------
YAB1
-----
ANAC58
--------->
ANAC55(2)
----------->
GT1
-------
-----
ANAC58
--------->
YAB1
--------->
GLK1(2)
--------->
YAB1
->
AGL15
<---------
ARR11(3)
<---------
WOX13(1)
<-----------
RAV1(1)
---------
--
AGL15
--------->
At4g35610
--------->
ATHB12
<---------
GLK1(1)
<---------
ICU4
tttcgtactgaacaagaagctcaagatgctatcacatatgttaacaagtgtttcattgatacttatcgaatatctgttgag
gttattaatcttcacttaa
1717300
------>
ZmHOX2a(1)
<---------
ALFIN1
<---------
ATERF1(1)
--------->
TCP16(1)
--------->
PCF2
<---------
ARR14(2)
--------->
SPL7
--------->
PCF5
------>
NtERF2
<---------
ZAT18
<---------
ANAC58
<---------
YAB1
<---------
ANAC58
--------->
GLK1(2)
<---------
ANAC46
<---------
ARR14(2)
<---------
At4g35610
--
--------->
ARR14(2)
<---------
LBD16
<---
--------->
TOE2(3)
<---------
TOE1(2)
--------->
ARR14(2)
---------
-->
AHL20(2)
--------------->
AtSPL8
<---------
GLK1(2)
--------->
At4g35610
<------
MYB83
>
ANAC55(2)
<---------------
AtSPL8
----------->
ARR10
<---------
TOE2(3)
--------->
LBD16
<------
MYB46(1)
ttactcagtttcacttatgtagtactagtttcaaatctaaatcagattctccttggtatatag
gttgcggaccctcctccgagggaagaagggaag
gtta
1717400
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AGI:
At5g05710.1
Description:
pleckstrin homology (PH) domain-containing protein. similar to ATPH1 (ARABIDOPSIS THALIANA PLECKSTRIN HOMOLOGUE 1) [Arabidopsis thaliana] (TAIR:AT2G29700.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41338.1); contains InterPro domain Pleckstrin-like (InterPro:IPR001849); contains InterPro domain Pleckstrin homology-type (InterPro:IPR011993)
Range:
from: 1715876
to: 1716500
Orientation: Forward
Links:
TAIR
MIPS
AGI:
At5g05720.1
Description:
RNA recognition motif (RRM)-containing protein. similar to RNA binding [Arabidopsis thaliana] (TAIR:AT4G19610.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41920.1); contains InterPro domain RNA recognition motif, RNP-1; (InterPro:IPR000504); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677)
Range:
from: 1716872
to: 1719542
Orientation: Forward
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.