Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                            <---------AHL20(2)                                                                                          <---------AHL20(1)                                                                                 --------->ARR11(3)                                                                                 <---------ARR11(3)                                                                               <---------ATHB12  ----        ------>ZmHOX2a(1)                                                     <---------TOE2(3)  <---     ---------->ID1                                                   --------->ZAT14 --------->AHL20(2)    <-----------GT1                                                   --------->ZAT2  <---------AHL20(2) <---------AHL20(2)                             --------->GLK1(1)     <---------ZAT2 --------->AHL20(2) -----AHL20(2)                                  <---------GLK1(1)     --------->At4g35610 --------->AHL20(2) -MYB52(1)                                    <------ZmHOX2a(1)       <---------At4g35610 --------->AHL20(1) >GT1<-----------GT1              <---------TOE2(3)            --------->REM1(1)--------->YAB1  -----   catttttttcctattttttaaaaaacaaaacaaaataagataaccataggaaatgccactctgttacaactcagcagtctaatgatatttaataaaatac  1378700                 <---------WRKY38(1)                 <---------WRKY12                 <---------WRKY45                --------->WRKY18(1)                                                --------->ATHB12                <<<<<<<<<<WRKY11                                                  <---------YAB1                <<<<<<<<<<WRKY6                                         ------>MYB83         <----------DOF2                                                ------>MYB46(1)       <---------MYB46(3)                                             <---------MYB111(2) ----------->AGL15                                                    <---------MYB111(1) ------------AGL15                                                    <---------MYB46(2) ------------>AGL3      --------->YAB1                                <---------MYB59           -----   caattttagtggtttatggtcaacaaaaatagtttacaagcttagctagatgtgaatacatactatatactaccaaactagtttatgatttgtatatgaa  1378800                            --------->AHL20(2)                    ----------->GT1                   <---------ICU4                --------->ATHB51                <--------HAHB4          <---------YAB1               --------->ICU4          --------->At5g28300               <---------YAB1        <-----------------AGL3                                      <---             --------->YAB1 <---------AHL20(2)                 --------->ARR11(3)              <-----             --------------->AGL15   <-----------------AGL2--------->DAG2              <---------At4g35610   ---------->DOF2--------->ICU4     <------------AtMYB77 ---------->DOF2              --------->At4g35610  --------->YAB1<---------ICU4     ------->TEIL   ---------->DOF2                <----------DOF2 <--- -->TEIL     ==========================================MADS_MADS    <---------TOE1(2)  <---------ZAT2   tcaataaaagcgttagcataattagtatatataaatgtaactgtaattggaccaaagagataaagcatcttgggtttagtaagcttttgagctgatgatg  1378900                                                                                            <--------                                                                                         <--------HAHB4                                                                                         <---------ICU4                                                                                         --------->ATHB51                                                                                        --------->ICU4                                                                                        <---------YAB1                                                <-----------GT1                    --------->YAB1      <---------YAB1                     ----------->GT1                         --------->ARR14(2) --------->ANAC55(2)              --------->GLK1(2)                           --------->ANAC55(2) ------ANAC58                   <---------KAN4(1)                 <---------AHL20(2)  --------->YAB1 ----YAB1<---------TOE2(3)      --------->KAN4(1)        --------->YAB1    <---------MYB52(1)     <-- ------ANAC58                  <---------KAN4(2)--------->YAB1    --------->AHL20(2)<-----------TGA1   cttatgtgattaatgtgaatataagaattagggaacaatcttgttgttaataacaatacttataacatttaaatgcccttaagtatcgtcataattacat  1379000                                                                                                  ---                                                                                                  <--                                                                                                  <--                                                                                                  <--                                                                                                  ---                                                                                          -----------                                                                                          <---------ETT(1)                                                                                         --------->DEAR3(2)                                                                                       ------>MYB83                                                                                       -------->P ---                                                                                       ------>MYB46(1)                                                                                      <xxxxxxxxxxxxxx                                                                                     --------->DEAR3(1)                        <---------DAG2                                              --------->MYB46(3)                        <----------DOF2                                             --------->DEAR3(2)           ------>ZmHOX2a(1)                      ------>MYB46(1)                 --------->MYB52(1)       --------->ARR14(2)     ------>ZmHOX2a(1)   ------>MYB83                --------->ANAC58   <---  ---------->ID1     <-----------GT1              -------->P                  --------->ANAC46   <--- ---GT1<---------ARR14(2)    <---------MYB59    --------->AtMYB61      <---------GLK1(2) --------->MYB46(3) --------DOF2   <----------DOF2           ----------->TBP            *TSS     --------->ANAC58   <---   ctttgtccctatccttctctttttcacttttcctaatctctaatataaaaccaactcttgtcaaattcaacaaaattctcacacaaaccgacccgacccg  1379100      <---------At4g35610      --------->At4g35610      <---------DEAR3(2)     <---------DEAR3(1)     <---------MYB46(3)    <---------ANAC46                                                                              ---    <---------ORA47(1)                                                                           ---- ------>ARR14(2)                                                                                 ---- -------ARR11(1)                                                                                 ---- -------ARR14(2)                                                                                ----- ---------ARR10                     ----------->RAV1(1)                                       ------- ---->TEIL                        --------->At4g35610                                         ------- >HVH21                          --------->RAP2.6(2)                          --------->TOE1(3)------ ------>GLK1(2)                --------->At4g35610                    --------->LBD16        -------- xxsmallRNA(s)                 <---------At4g35610                    ------>NtERF2         --------- ------CCA1(2)                 --------->ZAT2                       <---------LBD16        <---------LBD16 ------GLK1(2)                ----------->RAV1(1)       <----------DOF2       --------->TOE2(3)<----- ------ARR14(1)          ---------->DOF2     <---------MYB46(3)   --------->ARR14(2)    <----------DOF2   aatctggccggtgagaaaatggaggtccaaagcagcagcaacaatggtggtcactcttctttctccagtctccgcgtctacctcaactctctttccgcga  1379200                                                                        <---------LBD16                                                                      --------->ARR14(2)                                                                      <---------ARR14(2)                                                                     --------->ATERF1(1)                                                                    <---------ATERF1(1)                                                                    <-----------HVH21                                                                    ------>NtERF2                                                                   --------->DEAR3(1)                                                                   --------->RAP2.3(2)                                                                   --------->RAP2.3(3)                                                                  --------->DEAR4(2)                                                                  --------->RAP2.3(1)                                                                  <------NtERF2                                                                  --------->ORA47(2)                                                                  --------->ATERF1(1)                                                                 <---------ATERF1(1)                                                                 ------>NtERF2                     --                   --------->ANAC58                             <---------DEAR3(1)          --------- --->NtERF2        --------->ANAC58                             --------->ANAC46          <---------SPL7 ----->ANAC58     <------NtERF2                                <------NtERF2             --------->DEAR3(1) ----->ANAC58     ------>NtERF2                                --------->ATERF1(1)   <-------TEIL<--- ----->DEAR3(1)   --------->LBD16                             <---------ATERF1(1)    <---------ABI4(2) ---->ATERF1(1)  --------->DEAR3(1)                          <---------DEAR3(1)    --------->ARR14(2) ---->HVH21     --------->ATERF1(1)                          --------->SPL7        <---------ARR14(2) -->ANAC46      <------NtERF2                              <-----------HVH21       <---------GLK1(2)< >NtERF2       ------>NtERF2<---------ANAC58               <---------SPL7<---------DEAR3(1) --------- ->LBD16       --------->LBD16       <---------ALFIN1     <---------ANAC46        --------->At4g35610 >ANAC46     <---------LBD16<---------ANAC58              <---------ANAC58--------->LBD16<---------ANAC46 ----ATERF1(1)--------->ANAC46    <---------ALFIN1        <---------ANAC58------>NtERF2 <------NtERF2   cgccttctcgcttatcccgccgcgctatttccgtctccacctcttccgacgagatgagtcgcgtccgcgccgtctccggcgaacagatgcgccgtactct  1379300                                               <---------MYB52(1)                                              <---------DEAR3(2)                                             --------->DEAR3(1)                                             <---------DEAR3(1)                                            --------->ATERF1(1)                                           <---------RRTF1(1)                                           <---------ERF1                                         --------->ATERF1(1)                                         <------NtERF2                                        <---------RAP2.3(1)                                        <---------ATERF1(1)                                        <---------DEAR4(2)                                        <---------DEAR3(2)                                        <---------ORA47(2)                                       <---------RAP2.3(3)                                       <---------DREB2C(2)                                       <---------DEAR4(1)                                       --------->ETT(1)            <---------ANAC58                         --------->ARR14(2)<---------RAP2.3(1)    <---------DEAR3(1)                         --------->GLK1(2) <---------RAP2.6(1) --------->ATERF1(2)           <---------YAB1<---------ARR14(2)------>NtERF2       <---------ATERF1(2)           ------>ZmHOX2a(1)          ------>ZmHOX2a(2)            <---------DEAR3(1)      --------->DEAR3(1)        <---------MYB52(1)         <------ZmHOX2a(2)         <---------AtMYB61<----------DOF2<---------ANAC58     <---------DEAR3(2)     --------->SPL7     <---------GLK1(2)--------->RAP2.3(1)   <---------MYB55(2)     <------NtERF2   <---------SPL7       --------->ARR14(2)<---------RAP2.3(2)--------->MYB52(1)       --------->ATERF1(1)  <---------MYB46(3)    <---------ARR14(2)--------->DEAR3(1)--------->AtMYB61        <---------RAP2.3(1) --------->ALFIN1    --------->ANAC58 <---------ORA47(1)    --------->DEAR3(1)       ------>NtERF2 ------->LBD16       --------->ANAC58<-----------HVH21     --------->MYB46(3)       <---------DEAR3(1) >ZAT14 --------->ARR11(3)   --------->LBD16<------NtERF2<-----------GT1            --------->ANAC46 ------LBD16--------->ATHB12<---------LBD16<---------ATERF1(1) --------->MYB46(3)   --------->DEAR3(1) ---------MYB52(1)  <---------LBD16<---------HSFB2a(1) <-----------HVH21        <---------HSFB2a(2) >SPL7  <---------ARR11(3) <---------LBD16<---------DEAR3(1)<---------ALFIN1    --------->HSFB2a(2)   ccggtggtacgatctcattggactcggaatcgggggaatggtcggcgccggtgtctttgtcaccaccggccgtgctagtcgtctcgacgccggtccttca  1379400                                                                                        <------NtERF2                                                                                        --------->ATERF1(1)                                                                                       <---------ORA47(2)                                                                                       <---------RAP2.3(1)                                                                                       <---------DEAR4(2)                                                                                       --------->ABI4(2)                                                                                       <---------DEAR3(2)                                                                                       <---------ATERF1(1)                                                                                       <---------MYB46(3)                                                                                      --------->ALFIN1                                                                                      <---------DEAR3(1)                                                                                     <---------ABI4(1)                                                                                     --------->ATERF1(1)                                                                                     <------NtERF2                                                                                    ------>NtERF2                                                                                    <---------ATERF1(1)                                                                                    --------->LBD16                                                                                    <---------DEAR4(2)                                                                                    <---------RAP2.3(1)                                                                                   --------->ATERF1(2)                                                                                   <---------RAP2.3(2)                                                                                   --------->DEAR3(1)                                                                                   <---------DEAR3(1)                                                                                  --------->ATERF1(1)                                                                                  <---------LBD16                                                                                  <------NtERF2                                                                                  --------->RAP2.3(1)                              <---------ZAT18                                    <---------RAP2.3(1)                     ------>NtERF2                                               <---------ATERF1(1)                 --------->DEAR3(1)                                             <---------ETT(2)               <---------ATERF1(1)                                              --------->ETT(2)              --------->DEAR3(1)                                            --------->LBD16           --------->ANAC58 --------->ZAT14                                <---------LBD16------>NtERF2           --------->ANAC46 <---------ZAT18                       --------->ORA47(1)<---------ERF1           --------->ANAC58 <---------ZAT14                       ------>NtERF2 <---------DEAR3(1)  <          --------->SPL7  ---------->CDC5                        --------->DEAR3(1)<---------ATERF1(2)    <---------CCA1(2)--------->LBD16        <---------DAG2 <---------ARR14(2)  --------->SPL7    ----  <---------ANAC58  --------->DEAR3(1)      <----------DOF2--------->ARR14(2) <-----------HVH21  <---  <---------ANAC58 <---------LBD16   ------>ZmHOX2a(1) --------->ANAC46   <---------LBD16 --------->ABI4(2)   attgtcgtctcttacgccatcgccgggctctgcgctctcctctccgctttctgttacaccgaattcgccgtccatctcccggtcgccggcggtgccttca  1379500                                                           --------->ZAT14       <---------CCA1(2)                --------->ZAT6     <---------REM1(2)      --------->LBD16                   <---------ICU4     <---------ZAT14     --------->ANAC55(2)    --------->LBD16            ------>ZmHOX2a(2)     <---------ANAC55(2)   <---------LBD16       ------>ZmHOX2a(1) --------->REM1(1)   --------->MYB52(2)<---------YAB1 <------ZmHOX2a(2) -------TEIL       <---------MYB52(1)<---------ICU4  --------->ARR14(2)        <---------AHL20(2)  -- ----->At4g35610   <--------P--------->LBD16     =============HOX2a_HOX2a     --------->AHL20(2)  --- ------At4g35610  <-------GAMYB      --------->YAB1  <---------ARR14(2)       <---------AHL20(2)  ---   gctacatccgtatcacattcggttagtctcccgcgaaaatcatcactactcctccgatctgttcacggttttctgaaaattttaatttcaaaatcaaaaa  1379600  Previous    Next  AGI:  At5g04770.1    Description:  ATCAT6/CAT6 (CATIONIC AMINO ACID TRANSPORTER 6); amino acid transmembrane transporter/ basic amino acid transmembrane transporter/ cationic amino acid transmembrane transporter. similar to CAT7 (CATIONIC AMINO ACID TRANSPORTER 7), cationic amino acid transmembrane transporter [Arabidopsis thaliana] (TAIR:AT3G10600.1); similar to hypothetical protein OsI_033960 [Oryza sativa (indica cultivar-group)] (GB:EAY80001.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO62401.1); similar to amino acid transporter-like protein [Oryza sativa (japonica cultivar-group)] (GB:AAX92723.1); contains InterPro domain Cationic amino acid transporter Range:  from: 1379069    to: 1382420    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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