Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                        ----------->GT1                                                                                  <------ZmHOX2a(1)                                                     --------->ANAC58            <------MYB46(1)           --------->AHL20(2)                 <-------TEIL                       <------MYB83   --------->At4g35610                     <---------ANAC58             =================HOX2a_HOX2a   <---------At4g35610                     <---------ANAC46             <------ZmHOX2a(2) -DOF2   --------->YAB1                    <---------ANAC58<---------GLK1(2)   <--------P ------AGL15         --------->ATHB12<-------TEIL    --------->ANAC58  <---------ARR11(3) ----->AGL15<---------AHL20(2)      --------->CCA1(2)--------->ANAC46  --------->ARR11(3)   tagacagctaataataaatagaaagattggagagagagatacataccgtgcatacaggccagaattttgccaagatcagaggtaggagtagtcaatactc  18059100                                           --------->ARR14(2)                                       <---------LBD16                                  --------->ARR14(2)                              <-----------GT1                                  <---------GLK1(2)                     ------>ZmHOX2a(2)                                  <---------ARR14(2)                   <------ZmHOX2a(2)    ---------                             ------>NtERF2 <---------GLK1(2)          --------->ARR14(2)    <--------          --------->ANAC58  --------->ANAC46                          <---------ARR11(3)    ---------          ------>NtERF2--------->ARR14(2)  <---------ARR14(2)         --------->ARR11(3)    ---------          --------->ANAC46  <---------ALFIN1                          <---------ARR14(2)    ---------          --------->ANAC58 --------->MYB46(3)                     ---------->DOF2 --------->YAB1    <----------DOF2    <---------ARR14(2)--------->LBD16      ---------->DOF2  <---------ICU4   taactcctttgccagccattgtcaaaatccccaccgtattctccggattcgactgcaattgcaaaaaagaaagatccctaaaaatcacaatctcacgcaa  18059200                                           <---------LBD16                                           --------->TOE2(2)                                          ----------->RAV1(2)                                     -------->ATHB1                                    ----------->RAV1(2)                                     <---------ICU4                                   ------>NtERF2                                     --------->ATHB51                            <---------MYB52(1)                                    <---------AHL20(2)                         <---------ANAC58       --------->TOE2(3)            <---------ATHB51                  --------->MYB52(1)       --------->TOE1(3)            --------->ICU4          ---------->DOF2    <---------ANAC46 >ANAC58                       --------->TOE2(3)          --------->LBD16      <---------ANAC58 -ANAC55(2)                   <---------ANAC55(2)        --------->ANAC58 --------->At4g35610 >ANAC55(1)                   ----------->GT1            --------->ANAC58 <---------At4g35610 >ANAC58            <---------ANAC55(2) <-----------GT1 <------NtERF2 <-----------GT1<---------RAP2.6(2) >ANAC46            ----------->GT1 --------->AHL20(2)  <---------LBD16   --------->ZAT2   acccaaaaaccctaatcgaatcaagtgaaaaaacgtaaattattacctgggttttggctccgcaaagaagattaacagcttccgtttgcgcctgtaacct  18059300                                                            --------->REM1(1)                                                --------->YAB1                                               <---------YAB1                                   -----                                           <---------ANAC55(2)   --------->ANAC58              ------                         <---------ALFIN1  --------->ANAC55(2)   --------->ANAC58   --------->DAG2                        --------->MYB46(3)<-------TEIL  <------NtERF2 <---------ATHB12         <-----                <---------MYB52(1)    --------->ETT(2) XXXXXXXXXXXXXXXXXXXXX>MIR173---------->DOF2  <   agacggagagtaatctccgtttcgcatccactcggagttgtcgatacatatcatagtcgcctacaacaagaaatcatcgatgagaaaaagcattcaacgt  18059400                        --------->ATHB12                     --------->ANAC58                     --------->ANAC55(1)               <---------ETT(2)                     --------->ANAC46         --------->HSFC1(2)               --------->ANAC58               <---------HSFB2a(1)                      <---------ANAC46 ---->ALFIN1   --------->ANAC58               <---------HSFC1(2)                    <-----------RAV1(1) ->MYC3      --------->CCA1(2)           --------->HSFB2a(2)           <---------HSFC1(2) --MYC3   ----------->ARR10 ----------->GT1   --------->MYB46(3)       --------->HSFC1(2)       ----- ------ZmHOX2a(2)    --------->ANAC58    <---------HSFB2a(2) --------->At4g35610 --------->GLK1(2)   ggatcatcaacgaagataagcacaagtaattggaaaatcacctcgagaaccatcgtgtcgataagcagagagaagcttcaaaaattctgtcgtagagaga  18059500                                                                     <---------DAG2                                                                     <----------DOF2                                                                   <------------------------ANAC81                                                               <---------ARR14(2)                                                               --------->ARR14(2)                   --------->ARR11(3)                          <-----------GT1                   <---------ARR11(3)         <------------CBF --------->ARR11(3)                 <---------TOE2(3)         <-----------GT1     <---------ARR11(3)              --------->CCA1(2)         --------->YAB1        --------->CCA1(1)             <---------ARR11(3)         <---------ICU4        --------->RVE1(1)       ---------->ID1       --------->ANAC58                --------->ICU4     ----------->TBP <---------DAG2       --------->ANAC58              --------->YAB1       --------->AHL20(2)      <----------DOF2    <------ZmHOX2a(1)             *TSS <---------YAB1     <---------AHL20(2)   <-----------GT1 ----->DOF2  --------->ARR11(3)  ----------->GT1        <----------DOF2   <----------DOF2<----------DOF2   aagtcaggaaggcaagatttagattttagtttagaccgataataataacattgttcttctttaaatatcccctttacttttttactttctccttttagac  18059600                                          <---------YAB1                 ------------>CBF   <---------MYB46(3)                          ---------->DOF2                <-----------GT1    <--------P     --------->ANAC58    <---------YAB1          --------->TOE2(3)      <---------MYB46(3)       ---------->DOF2<---------TOE2(3)         <---------ANAC46       <---------ATHB12  --------->ANAC58 --------->AHL20(2)        <---------TOE2(3)   ------------>CBF     --------->DAG2    <---------AHL20(2)       <-----------GT1     >>>>>>>>>>>>>>>>>LFY ---------->DOF2   <---------WOX13(1)       --------->ANAC46   cctaatgttttacgtttatttcaatttagccccaatggttgtttttgataaaaagcaaaacaaagttgatttattaatgaataaaagaaacacagaccac  18059700                                                                                                  <--                                                                                                  ---                                                                 --------->TOE2(3)         --------->MYB46(3)                  ---------->DOF2                     --------->ZAT6                     --------->ANAC58           ------>ZmHOX2a(1)<----------DOF2        <---------CCA1(2)                     --------->ANAC58   --------->At5g28300  <----------DOF2     <-----------GT1--------->ANAC46         <----------ID1<--   attacagtaattcctataactaaagtctttcttttattcaacattgttaccccataactctacaaaacatcaatataaaccccaagaagacaaaccacag  18059800                                                 --------->ANAC58                                                 --------->ANAC58                                           <-------TEIL  <---------TGA1a                                          --------->CCA1(2)  <---------MYB46(3)                      ------------------------>ANAC81    <---------O2                    ===============================================MYC_MYB         <------ZmHOX2a(1)  --------->MYB46(3) ====================bZIP_DOF -------ZAT18       ------->GAMYB    ---------->DOF2     ===========================================bZIP_DOF ------>ZAT14     <---------------------WRI1   ---------->DOF2  <------ZmHOX2a(2) -------ZAT14 <-----------GT1        ==============================bZIP_DOF              <----------DOF2   ttcaccagagaggaatttacaacggtgctaacaaacaaaaaaagatacaacaagcagagacgttggatcatcttctgctatgcattaagagcatttggga  18059900                   --------->At4g35610                   <---------At4g35610                <---------At4g35610        ------>ZmHOX2a(2)       <------ZmHOX2a(2)                                                                        -----      --------->ARR14(2)                                                                       ------      <---------ARR11(3)                                                                     --------      <---------ARR14(2)                                                                  --------->ANAC55(2)      <-----------ARR10                                                                   <---------ANAC55(2)      --------->ARR11(3)                                                                  <---------ANAC58      <---------AGP1                                                                      <---------ANAC58      <---------ARR14(3)  --------->ANAC58               <---------At4g35610         --------->WOX13(1)      --------->ARR14(3)  --------->ANAC58              ------>ZmHOX2a(1)<----------DOF2  --------->ANAC46    ----------->ARR10<---------YAB1             <---------ZAT18  <-------TEIL---------->ID1 ---------   tgagagaagatcttgtgcttctgctgataggcaagtgaacataaacctcgtgaacttcctgcttacatacatcccctttgtctctatcaatcgcgtaaca  18060000  Previous    Next  AGI:  At4g38630.1    Description:  RPN10 (REGULATORY PARTICLE NON-ATPASE 10). Identical to 26S proteasome non-ATPase regulatory subunit 4 (MBP1) [Arabidopsis Thaliana] (GB:P55034); similar to unnamed protein product [Vitis vinifera] (GB:CAO48194.1); contains InterPro domain Ubiquitin interacting motif (InterPro:IPR003903); contains InterPro domain von Willebrand factor, type A (InterPro:IPR002035) Range:  from: 18057124    to: 18059534    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g38640.1    Description:  choline transporter-related. similar to unnamed protein product [Vitis vinifera] (GB:CAO47364.1); contains InterPro domain Protein of unknown function DUF580 (InterPro:IPR007603) Range:  from: 18059647    to: 18062283    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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