Search
Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
Go to graphical and table display
1 10 20 30 40 50 60 70 80 90 100
----------->
GT1
<------
ZmHOX2a(1)
--------->
ANAC58
<------
MYB46(1)
--------->
AHL20(2)
<-------
TEIL
<------
MYB83
--------->
At4g35610
<---------
ANAC58
=================
HOX2a_HOX2a
<---------
At4g35610
<---------
ANAC46
<------
ZmHOX2a(2)
-
DOF2
--------->
YAB1
<---------
ANAC58
<---------
GLK1(2)
<--------
P
------
AGL15
--------->
ATHB12
<-------
TEIL
--------->
ANAC58
<---------
ARR11(3)
----->
AGL15
<---------
AHL20(2)
--------->
CCA1(2)
--------->
ANAC46
--------->
ARR11(3)
tagacagctaataataaatagaaagattggagagagagatacatac
cgtgcatacaggccagaattttgccaagatcagaggtaggagtagtcaatactc
18059100
--------->
ARR14(2)
<---------
LBD16
--------->
ARR14(2)
<-----------
GT1
<---------
GLK1(2)
------>
ZmHOX2a(2)
<---------
ARR14(2)
<------
ZmHOX2a(2)
---------
------>
NtERF2
<---------
GLK1(2)
--------->
ARR14(2)
<--------
--------->
ANAC58
--------->
ANAC46
<---------
ARR11(3)
---------
------>
NtERF2
--------->
ARR14(2)
<---------
ARR14(2)
--------->
ARR11(3)
---------
--------->
ANAC46
<---------
ALFIN1
<---------
ARR14(2)
---------
--------->
ANAC58
--------->
MYB46(3)
---------->
DOF2
--------->
YAB1
<----------
DOF2
<---------
ARR14(2)
--------->
LBD16
---------->
DOF2
<---------
ICU4
taactcctttgccagccattgtcaaaatccccaccgtattctccggattcga
ctgcaattgcaaaaaagaaagatccctaaaaatcacaatctcacgcaa
18059200
<---------
LBD16
--------->
TOE2(2)
----------->
RAV1(2)
-------->
ATHB1
----------->
RAV1(2)
<---------
ICU4
------>
NtERF2
--------->
ATHB51
<---------
MYB52(1)
<---------
AHL20(2)
<---------
ANAC58
--------->
TOE2(3)
<---------
ATHB51
--------->
MYB52(1)
--------->
TOE1(3)
--------->
ICU4
---------->
DOF2
<---------
ANAC46
>
ANAC58
--------->
TOE2(3)
--------->
LBD16
<---------
ANAC58
-
ANAC55(2)
<---------
ANAC55(2)
--------->
ANAC58
--------->
At4g35610
>
ANAC55(1)
----------->
GT1
--------->
ANAC58
<---------
At4g35610
>
ANAC58
<---------
ANAC55(2)
<-----------
GT1
<------
NtERF2
<-----------
GT1
<---------
RAP2.6(2)
>
ANAC46
----------->
GT1
--------->
AHL20(2)
<---------
LBD16
--------->
ZAT2
acccaaaaaccctaatcgaatcaagtgaaaaaacgtaaattattac
ctgggttttggctccgcaaagaagattaacagcttccgtttgcgcctgtaacct
18059300
--------->
REM1(1)
--------->
YAB1
<---------
YAB1
-----
<---------
ANAC55(2)
--------->
ANAC58
------
<---------
ALFIN1
--------->
ANAC55(2)
--------->
ANAC58
--------->
DAG2
--------->
MYB46(3)
<-------
TEIL
<------
NtERF2
<---------
ATHB12
<-----
<---------
MYB52(1)
--------->
ETT(2)
XXXXXXXXXXXXXXXXXXXXX>
MIR173
---------->
DOF2
<
agacggagagtaatctccgtttcgcatccactcggagttgtcgatacatatcatagtcgc
ctacaacaagaaatcatcgatgagaaaaagcattcaacgt
18059400
--------->
ATHB12
--------->
ANAC58
--------->
ANAC55(1)
<---------
ETT(2)
--------->
ANAC46
--------->
HSFC1(2)
--------->
ANAC58
<---------
HSFB2a(1)
<---------
ANAC46
---->
ALFIN1
--------->
ANAC58
<---------
HSFC1(2)
<-----------
RAV1(1)
->
MYC3
--------->
CCA1(2)
--------->
HSFB2a(2)
<---------
HSFC1(2)
--
MYC3
----------->
ARR10
----------->
GT1
--------->
MYB46(3)
--------->
HSFC1(2)
-----
------
ZmHOX2a(2)
--------->
ANAC58
<---------
HSFB2a(2)
--------->
At4g35610
--------->
GLK1(2)
ggatcatcaacgaagataagcacaagtaattggaaaatcac
ctcgagaaccat
cgtgtcgataagcagagagaagcttcaaaaattctgtcgtagagaga
18059500
<---------
DAG2
<----------
DOF2
<------------------------
ANAC81
<---------
ARR14(2)
--------->
ARR14(2)
--------->
ARR11(3)
<-----------
GT1
<---------
ARR11(3)
<------------
CBF
--------->
ARR11(3)
<---------
TOE2(3)
<-----------
GT1
<---------
ARR11(3)
--------->
CCA1(2)
--------->
YAB1
--------->
CCA1(1)
<---------
ARR11(3)
<---------
ICU4
--------->
RVE1(1)
---------->
ID1
--------->
ANAC58
--------->
ICU4
----------->
TBP
<---------
DAG2
--------->
ANAC58
--------->
YAB1
--------->
AHL20(2)
<----------
DOF2
<------
ZmHOX2a(1)
*
TSS
<---------
YAB1
<---------
AHL20(2)
<-----------
GT1
----->
DOF2
--------->
ARR11(3)
----------->
GT1
<----------
DOF2
<----------
DOF2
<----------
DOF2
aagtcaggaaggcaagatttagattttagtttag
accgataataataacattgttcttctttaaatatcccctttacttttttactttctccttttagac
18059600
<---------
YAB1
------------>
CBF
<---------
MYB46(3)
---------->
DOF2
<-----------
GT1
<--------
P
--------->
ANAC58
<---------
YAB1
--------->
TOE2(3)
<---------
MYB46(3)
---------->
DOF2
<---------
TOE2(3)
<---------
ANAC46
<---------
ATHB12
--------->
ANAC58
--------->
AHL20(2)
<---------
TOE2(3)
------------>
CBF
--------->
DAG2
<---------
AHL20(2)
<-----------
GT1
>>>>>>>>>>>>>>>>>
LFY
---------->
DOF2
<---------
WOX13(1)
--------->
ANAC46
cctaatgttttacgtttatttcaatttagccccaatggttgttttt
gataaaaagcaaaacaaagttgatttattaatgaataaaagaaacacagaccac
18059700
<--
---
--------->
TOE2(3)
--------->
MYB46(3)
---------->
DOF2
--------->
ZAT6
--------->
ANAC58
------>
ZmHOX2a(1)
<----------
DOF2
<---------
CCA1(2)
--------->
ANAC58
--------->
At5g28300
<----------
DOF2
<-----------
GT1
--------->
ANAC46
<----------
ID1
<--
attacagtaattcctataactaaagtctttcttttattcaacattgttaccccataactctacaaaacatcaatataaaccccaagaagacaaaccacag
18059800
--------->
ANAC58
--------->
ANAC58
<-------
TEIL
<---------
TGA1a
--------->
CCA1(2)
<---------
MYB46(3)
------------------------>
ANAC81
<---------
O2
===============================================
MYC_MYB
<------
ZmHOX2a(1)
--------->
MYB46(3)
====================
bZIP_DOF
-------
ZAT18
------->
GAMYB
---------->
DOF2
===========================================
bZIP_DOF
------>
ZAT14
<---------------------
WRI1
---------->
DOF2
<------
ZmHOX2a(2)
-------
ZAT14
<-----------
GT1
==============================
bZIP_DOF
<----------
DOF2
ttcaccagagaggaatttacaacggtgctaacaaacaaaaaaagatacaacaagcagagacgttggatcatcttctg
ctatgcattaagagcatttggga
18059900
--------->
At4g35610
<---------
At4g35610
<---------
At4g35610
------>
ZmHOX2a(2)
<------
ZmHOX2a(2)
-----
--------->
ARR14(2)
------
<---------
ARR11(3)
--------
<---------
ARR14(2)
--------->
ANAC55(2)
<-----------
ARR10
<---------
ANAC55(2)
--------->
ARR11(3)
<---------
ANAC58
<---------
AGP1
<---------
ANAC58
<---------
ARR14(3)
--------->
ANAC58
<---------
At4g35610
--------->
WOX13(1)
--------->
ARR14(3)
--------->
ANAC58
------>
ZmHOX2a(1)
<----------
DOF2
--------->
ANAC46
----------->
ARR10
<---------
YAB1
<---------
ZAT18
<-------
TEIL
---------->
ID1
---------
tgagagaagatcttgtgcttctgctgataggcaagtgaacataaacctcgtgaacttcctgcttacatacatcccctttgtctctatcaatcgcgtaaca
18060000
Previous
Next
AGI:
At4g38630.1
Description:
RPN10 (REGULATORY PARTICLE NON-ATPASE 10). Identical to 26S proteasome non-ATPase regulatory subunit 4 (MBP1) [Arabidopsis Thaliana] (GB:P55034); similar to unnamed protein product [Vitis vinifera] (GB:CAO48194.1); contains InterPro domain Ubiquitin interacting motif (InterPro:IPR003903); contains InterPro domain von Willebrand factor, type A (InterPro:IPR002035)
Range:
from: 18057124
to: 18059534
Orientation: Reverse
Links:
TAIR
MIPS
AGI:
At4g38640.1
Description:
choline transporter-related. similar to unnamed protein product [Vitis vinifera] (GB:CAO47364.1); contains InterPro domain Protein of unknown function DUF580 (InterPro:IPR007603)
Range:
from: 18059647
to: 18062283
Orientation: Reverse
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.