Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                            <---------DAG2                                                                                          <----------DOF2                                                                                          -----------                                           ----------------->AGL1                         <----------                                   ------->GAMYB                   <---------ICU4  <---------WOX13(1)                                  --------->MYB46(3)              <---------YAB1--------->LBD16                                <---------ICU4         ------>ZmHOX2a(2)      <---------LBD16          <----------DOF2   ==================================HOX2a_HOX2a    --------->MYB52(1) ------>ARR11(3)            ------>ZmHOX2a(1)        <---------ARR14(2)     --------->ARR14(2) -------ARR11(3)<----------DOF2 <-----------GT1      --------->ARR14(2)     <---------ARR14(2)   gagcttcagtttctttctcttttctacttcctaataaccaccatggccaacttgggatcggtctcttcatcatttcaagaaccggattgatacttttttc  17874400                                          --------->ANAC46                                          --------->ANAC58                                          --------->ANAC58                                         ------->GAMYB                                    --------->MYB46(3)                           <------ZmHOX2a(2)                          <---------ARR11(3)                          --------->ARR11(3)                         --------->YAB1------>MYB46(1)                      ---------->DOF2 ----------->RAV1(1)                     <---------WRKY12------->GAMYB                          -------->P                     <---------WRKY38(1)<---------ALFIN1               --------->WOX13(1)                     <---------WRKY45--------->AtMYB61                --------->AHL20(2)                    --------->WRKY18(1)------>MYB83                   <---------AHL20(2)                   <-----------HVH21<---------MYB52(2)               <---------ATHB12      --------->At4g35610              <---------ARR14(2)    <---------MYB55(2)        <---------ANAC58      <---------ATHB12              --------->GLK1(2)    --------->ANAC58           <---------ANAC58    --------->YAB1    - ---->AGL15   --------->ARR11(3)   -------->P                 <---------ANAC46--------->TOE2(3)   <-- -----AGL15--------->AHL20(2)      --------->ANAC58      <----------DOF2    ------->TEIL <-----------RAV1(2)   agaaattccaccataaaatctggtcaaagatcacagcaaccaacacacaattgaaaacccttttgcttgcaataaatcaacctctaatgactcagaagaa  17874500                                                                                                -----                                                                                               ------                                                                                               <-----                                                                                              <------                                                                                              -------            ---------->DOF2                                                                   <------       ----------->GT1                      <---------------------WRI1                        <------     ------->TEIL                          <------ZmHOX2a(1)                                  -------    --------->MYB52(1)           <---------ARR11(3)                                           -------  <---------ATHB12               --------->GLK1(2)  <-----------HVH21                  --------->At4g35610 -------->WOX13(1)        <----------ID1  <----------ID1      ---------->DOF2          <---------At4g35610 -------ATHB12     --------->AHL20(2)  ---------->DOF2     <------ZmHOX2a(1)--------->TOE2(3) <------   atcaatgaacggtttaaagaataaaaaaaaaacaaaatctaaaaaggacaaaactttcacaggaaaaagatgaaattttcttaactcttagctcaagatc  17874600      <---------YAB1    --------->REM1(1) ->ZmHOX2a(2) --->CCA1(2) -ZmHOX2a(2) ---ARR11(3) -->ARR14(2) ---ARR14(2)                        --------->GLK1(2)                                       --------- -----ARR10                        <---------GLK1(2)                                       ---------- -->ARR11(3)                    --------------->AGL15                                   --------->MYB52(1) -->AGP1                     <-----------GT1                                          ---------->DOF2 ---AGP1               <---------TOE2(3)                  <---------GLK1(2)      --------->LBD16-----   taagcttcaccattgaaacacaaataatgtttcaccagaatttgaaaatgaaatcaactagaatttgaagaaattttaaaacccccaaaaaaacggtgaa  17874700                                                                        <---------ETT(1)                                                                        --------->DEAR3(1)                                                             <--------HAHB4                                                             <---------ICU4                                                             --------->ATHB51  <---------ARR14(2)                          --------->TOE2(3)                  --------->YAB1    --------->ARR14(2)                       <---------ARR14(2)                   --------->ICU4    ------>MYB46(1)      --     ---------->DOF2   --------->ARR14(2)                   <---------YAB1  <---------MYB59       *TSS   --------->YAB1     ================================HOX2a_HOX2a      --------->SPL7           -----  <---------YAB1      <------ZmHOX2a(1)                ------>ZmHOX2a(1)----------->HVH21       ----- >At5g28300<------ZmHOX2a(2)  ---------->DOF2   --------->YAB1 <---------YAB1 ------>MYB83<---------ANAC46 ->GT1   <------ZmHOX2a(1)--------->TOE1(3)    ===============HOX2a_HOX2a------>NtERF2<---------SPL7 ---->ICU4 ==================HOX2a_HOX2a       <------ZmHOX2a(2) <-----------GT1 <-------TEIL   -----   aattatcaaaaggatcagagaagaggaaccctaaaaacccaaattatcgatcatctccttccattattatccctccgaccaaattcgtcgtcccttgtac  17874800                                                                                  <-----------GT1                                                                          --------->RAP2.6(2)       <                                         ------------>CBF              ------->GAMYB                - --------->MYB46(3)         ----------->TBP                           --------->MYB46(3)          --- ------->MYB52(1)        <---------AHL20(2)    <----------DOF2      --------->MYB52(1)  ------>ZmHOX2a(2) ---->ANAC46             --------->AHL20(2)  <---------ATHB12     ------>ZmHOX2a(2)    <------ZmHOX2a(2) ---->ANAC58            <-----------TBP<-----------GT1            --------->MYB46(3)  --------->ARR14(2) ---->ANAC58        ------------>CBF<---------GLK1(1)    <---------TOE2(3)----------->RAV1(1)   -----   tcaacagctagtcgtcttcttctgcaatttataaatcgatttctccaatcttttggattaagttttgatccaacggccacaaattcacgatcggtctctc  17874900                         --------->ATHB12                       <---------WOX13(1)                     --------->ATHB12                                             ---------->DOF2              --------->ICU4                                                   --------->ANAC58              <---------AHL20(2)                                               --------->ANAC58              --------->AHL20(2)                                              <----------------------             <---------AHL20(1)                                               <-------TEIL  --------->TOE2(3) --------->ICU4                                           --------->ARR14(1) <--------HAHB4     <---------YAB1                                           --------->CCA1(2) <---------ICU4   -------->HAHB4                                            <---------ARR14(2) --------->ATHB12 <---------ICU4                                            --------->ARR11(1) --------->YAB1--------->YAB1                                               --------->ARR14(2) -------->ATHB1<---------ICU4--------->ATHB12                             <---------TOE2(3) ---------ATHB12  --------->YAB1                                  --------->AHL20(2)                < -------->ICU4<---------ATHB51                                    <---------AHL20(2)             ---- ------>WOX13(1) --------->ICU4                  <---------AHL20(2)    --------->AHL20(2)        <--- ------->CBF--------->YAB1 <---------WOX13(1)    --------->AHL20(2) <---------AHL20(2)   <------ZmHOX2a(1)   caatcattaaactaaaataattatgattgattgatggagtttctcaaatattaaaacatttttgttatataaatttaagatacgaaaagaaggagaagag  17875000                             <---------ANAC58                        ========================MYC_MYB     <---------YAB1          <---------MYB52(1) <---------ANAC58             --------->YAB1         <-------GAMYB  <---------O2                     --------->ICU4         =========================MYC_MYB              --------->YAB1                     <---------ANAC58      <---------At5g28300    <---------ANAC46         --------->ICU4                      <---------ANAC46     <-----------GT1    <---------TGA1a         --------->DAG2                            <---------ANAC58 -TaNAC69(2)            --------->O2    ------->GAMYB<---------TOE2(3)                    <---------ANAC55(1) ---------YAB1     ----------->HVH21   --------------->AtSPL3  <---------ANAC46   <---------ATHB12 ----->ARR11(3)  <----------DOF2    --------->MYB46(3)<---------YAB1        <-----------GT1 ------ARR11(3)  =================bZIP_DOF --------->SPL7<---------YAB1   <---------AHL20(2)   ttcttatttaccgttgattctttgacaagtggcttcttacaaccgtacaaaaattgatgatgatgatgtgttctattttatccaatcgttttgcgtgtgt  17875100                        <---------ZAT18                        <---------SPL7                       <---------ANAC58                       <---------ANAC46                       <---------ANAC58                      --------------->AtSPL3                      <------NtERF2                    --------->ALFIN1                   ------->PIF5                   ------->MYC3                   <-------MYC2                   <-------MYC3                   -------->ABF1                   <-------PIF5                   <-------MYC4                   ------->MYC2                   ------->MYC4                  --------->TGA1a                  <---------TGA1a             --------->At4g35610                  ==============================bZIP_DOF                  <---------O2                <---------At4g35610                           <--------                  --------->O2 <---------At4g35610                                   --------->ATHB12                  --------->ANAC55(2) <---------MYB52(1)                            <---------YAB1                  --------->ANAC46   <----------DOF2        ------->PIF5      --------->ARR11(3)                  ==============================bZIP_DOF    <-------PIF5      <---------ARR11(3)           --------->MYB59     ----------->RAV1(2)      <---------At4g35610  <---------GLK1(1)     --   XXXXXXXXXXXXXXXXXXXX>MIR778 --------->At4g35610  <----------DOF2          --------->GLK1(1) ------   atgaggctcaagttatgtacacgtggcgtactcatctgcctttggttcttctgactttagctcgtggagattactagggaaatcttatgatttagagata  17875200                              --------->LBD16                             --------->ANAC46                          <---------ARR14(2)                         <-------GAMYB                  <---------ICU4                                    <------MYB83                  --------->YAB1                                    <---------MYB46(3)                  -------->HAHB4                       --------->HSFC1(1)                 <---------YAB1                        <---------HSFB2a(2)              --------->AHL20(2)                       --------->HSFB2a(2)             <---------AHL20(1)                        <---------HSFC1(1)             --------->AHL20(2)                   <---------KAN4(1) ----------->GT1         <---------AHL20(2) <---------LBD16      ------->TEIL       <------MYB46(1)               ---     <----------DOF2      <---------REM1(2)   <---------YAB1       <---------AtMYB61         <------- -ZAT6   <---------YAB1   --------->ARR14(2)--------->YAB1      <---------ZAT6               -------- -------->DOF2<---------AHL20(2)         <----------DOF2        <-----------RAV1(1)          <------- --->CCA1(2) <---------AHL20(2)        <---------ICU4  >>>>>>>ZML2<--------P              ---------->ID1   agaaagactttataatttaattatagcctatacggagataatactttcatgaatgttctagaaatagtgttggttaatttttgttttgtttagtcgttat  17875300  Previous    Next  AGI:  At4g38060.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G65480.1); similar to unknown [Lycopersicon esculentum] (GB:AAK84476.1) Range:  from: 17873831    to: 17874798    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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