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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
<---------
DAG2
<----------
DOF2
-----------
----------------->
AGL1
<----------
------->
GAMYB
<---------
ICU4
<---------
WOX13(1)
--------->
MYB46(3)
<---------
YAB1
--------->
LBD16
<---------
ICU4
------>
ZmHOX2a(2)
<---------
LBD16
<----------
DOF2
==================================
HOX2a_HOX2a
--------->
MYB52(1)
------>
ARR11(3)
------>
ZmHOX2a(1)
<---------
ARR14(2)
--------->
ARR14(2)
-------
ARR11(3)
<----------
DOF2
<-----------
GT1
--------->
ARR14(2)
<---------
ARR14(2)
gagcttcagtttctttctcttttctacttcctaataaccaccatggccaacttgggatcggtctcttcatcat
ttcaagaaccggattgatacttttttc
17874400
--------->
ANAC46
--------->
ANAC58
--------->
ANAC58
------->
GAMYB
--------->
MYB46(3)
<------
ZmHOX2a(2)
<---------
ARR11(3)
--------->
ARR11(3)
--------->
YAB1
------>
MYB46(1)
---------->
DOF2
----------->
RAV1(1)
<---------
WRKY12
------->
GAMYB
-------->
P
<---------
WRKY38(1)
<---------
ALFIN1
--------->
WOX13(1)
<---------
WRKY45
--------->
AtMYB61
--------->
AHL20(2)
--------->
WRKY18(1)
------>
MYB83
<---------
AHL20(2)
<-----------
HVH21
<---------
MYB52(2)
<---------
ATHB12
--------->
At4g35610
<---------
ARR14(2)
<---------
MYB55(2)
<---------
ANAC58
<---------
ATHB12
--------->
GLK1(2)
--------->
ANAC58
<---------
ANAC58
--------->
YAB1
-
---->
AGL15
--------->
ARR11(3)
-------->
P
<---------
ANAC46
--------->
TOE2(3)
<--
-----
AGL15
--------->
AHL20(2)
--------->
ANAC58
<----------
DOF2
------->
TEIL
<-----------
RAV1(2)
agaaattccaccataaaatctggtcaaagatcacagcaaccaacacacaattgaaaacccttttgcttgcaataaatcaacctctaatgactcagaagaa
17874500
-----
------
<-----
<------
-------
---------->
DOF2
<------
----------->
GT1
<---------------------
WRI1
<------
------->
TEIL
<------
ZmHOX2a(1)
-------
--------->
MYB52(1)
<---------
ARR11(3)
-------
<---------
ATHB12
--------->
GLK1(2)
<-----------
HVH21
--------->
At4g35610
-------->
WOX13(1)
<----------
ID1
<----------
ID1
---------->
DOF2
<---------
At4g35610
-------
ATHB12
--------->
AHL20(2)
---------->
DOF2
<------
ZmHOX2a(1)
--------->
TOE2(3)
<------
atcaatgaacggtttaaagaataaaaaaaaaacaaaatctaaaaaggacaaaactttcacaggaaaaagatgaaattttcttaactcttagctcaagatc
17874600
<---------
YAB1
--------->
REM1(1)
->
ZmHOX2a(2)
--->
CCA1(2)
-
ZmHOX2a(2)
---
ARR11(3)
-->
ARR14(2)
---
ARR14(2)
--------->
GLK1(2)
---------
-----
ARR10
<---------
GLK1(2)
----------
-->
ARR11(3)
--------------->
AGL15
--------->
MYB52(1)
-->
AGP1
<-----------
GT1
---------->
DOF2
---
AGP1
<---------
TOE2(3)
<---------
GLK1(2)
--------->
LBD16
-----
taagcttcaccattgaaacacaaataatgtttcaccagaatttgaaaatgaaatcaactagaatttgaagaaattttaaaacccccaaaaaaacggtgaa
17874700
<---------
ETT(1)
--------->
DEAR3(1)
<--------
HAHB4
<---------
ICU4
--------->
ATHB51
<---------
ARR14(2)
--------->
TOE2(3)
--------->
YAB1
--------->
ARR14(2)
<---------
ARR14(2)
--------->
ICU4
------>
MYB46(1)
--
---------->
DOF2
--------->
ARR14(2)
<---------
YAB1
<---------
MYB59
*
TSS
--------->
YAB1
================================
HOX2a_HOX2a
--------->
SPL7
-----
<---------
YAB1
<------
ZmHOX2a(1)
------>
ZmHOX2a(1)
----------->
HVH21
-----
>
At5g28300
<------
ZmHOX2a(2)
---------->
DOF2
--------->
YAB1
<---------
YAB1
------>
MYB83
<---------
ANAC46
->
GT1
<------
ZmHOX2a(1)
--------->
TOE1(3)
===============
HOX2a_HOX2a
------>
NtERF2
<---------
SPL7
---->
ICU4
==================
HOX2a_HOX2a
<------
ZmHOX2a(2)
<-----------
GT1
<-------
TEIL
-----
aattatcaaaaggatcagagaagaggaaccctaaaaacccaaattatcgatcatctccttccattattatccctccgaccaaattcgtcgtcccttgt
ac
17874800
<-----------
GT1
--------->
RAP2.6(2)
<
------------>
CBF
------->
GAMYB
-
--------->
MYB46(3)
----------->
TBP
--------->
MYB46(3)
---
------->
MYB52(1)
<---------
AHL20(2)
<----------
DOF2
--------->
MYB52(1)
------>
ZmHOX2a(2)
---->
ANAC46
--------->
AHL20(2)
<---------
ATHB12
------>
ZmHOX2a(2)
<------
ZmHOX2a(2)
---->
ANAC58
<-----------
TBP
<-----------
GT1
--------->
MYB46(3)
--------->
ARR14(2)
---->
ANAC58
------------>
CBF
<---------
GLK1(1)
<---------
TOE2(3)
----------->
RAV1(1)
-----
tcaacagctagtcgtcttcttctgcaatttataaatcgatttctccaatcttttggattaagttttgatccaacggccacaaattcacgatcggtctctc
17874900
--------->
ATHB12
<---------
WOX13(1)
--------->
ATHB12
---------->
DOF2
--------->
ICU4
--------->
ANAC58
<---------
AHL20(2)
--------->
ANAC58
--------->
AHL20(2)
<----------------------
<---------
AHL20(1)
<-------
TEIL
--------->
TOE2(3)
--------->
ICU4
--------->
ARR14(1)
<--------
HAHB4
<---------
YAB1
--------->
CCA1(2)
<---------
ICU4
-------->
HAHB4
<---------
ARR14(2)
--------->
ATHB12
<---------
ICU4
--------->
ARR11(1)
--------->
YAB1
--------->
YAB1
--------->
ARR14(2)
-------->
ATHB1
<---------
ICU4
--------->
ATHB12
<---------
TOE2(3)
---------
ATHB12
--------->
YAB1
--------->
AHL20(2)
<
-------->
ICU4
<---------
ATHB51
<---------
AHL20(2)
----
------>
WOX13(1)
--------->
ICU4
<---------
AHL20(2)
--------->
AHL20(2)
<---
------->
CBF
--------->
YAB1
<---------
WOX13(1)
--------->
AHL20(2)
<---------
AHL20(2)
<------
ZmHOX2a(1)
caatcattaaactaaaataattatgattgattgatggagtttctcaaatattaaaacatttttgttatataaatttaagatacgaaaagaaggagaagag
17875000
<---------
ANAC58
========================
MYC_MYB
<---------
YAB1
<---------
MYB52(1)
<---------
ANAC58
--------->
YAB1
<-------
GAMYB
<---------
O2
--------->
ICU4
=========================
MYC_MYB
--------->
YAB1
<---------
ANAC58
<---------
At5g28300
<---------
ANAC46
--------->
ICU4
<---------
ANAC46
<-----------
GT1
<---------
TGA1a
--------->
DAG2
<---------
ANAC58
-
TaNAC69(2)
--------->
O2
------->
GAMYB
<---------
TOE2(3)
<---------
ANAC55(1)
---------
YAB1
----------->
HVH21
--------------->
AtSPL3
<---------
ANAC46
<---------
ATHB12
----->
ARR11(3)
<----------
DOF2
--------->
MYB46(3)
<---------
YAB1
<-----------
GT1
------
ARR11(3)
=================
bZIP_DOF
--------->
SPL7
<---------
YAB1
<---------
AHL20(2)
ttcttatttaccgttgattctttgacaagtggcttcttacaaccgtacaaaaattgatgatgatgatgtgttctattttatccaatcgttttgcgtgtgt
17875100
<---------
ZAT18
<---------
SPL7
<---------
ANAC58
<---------
ANAC46
<---------
ANAC58
--------------->
AtSPL3
<------
NtERF2
--------->
ALFIN1
------->
PIF5
------->
MYC3
<-------
MYC2
<-------
MYC3
-------->
ABF1
<-------
PIF5
<-------
MYC4
------->
MYC2
------->
MYC4
--------->
TGA1a
<---------
TGA1a
--------->
At4g35610
==============================
bZIP_DOF
<---------
O2
<---------
At4g35610
<--------
--------->
O2
<---------
At4g35610
--------->
ATHB12
--------->
ANAC55(2)
<---------
MYB52(1)
<---------
YAB1
--------->
ANAC46
<----------
DOF2
------->
PIF5
--------->
ARR11(3)
==============================
bZIP_DOF
<-------
PIF5
<---------
ARR11(3)
--------->
MYB59
----------->
RAV1(2)
<---------
At4g35610
<---------
GLK1(1)
--
XXXXXXXXXXXXXXXXXXXX>
MIR778
--------->
At4g35610
<----------
DOF2
--------->
GLK1(1)
------
atgaggctcaagttatgtacacgtggcgtactcatctgcctttggttcttctgactttagctcgtggagattactagggaaatcttatgatttagagata
17875200
--------->
LBD16
--------->
ANAC46
<---------
ARR14(2)
<-------
GAMYB
<---------
ICU4
<------
MYB83
--------->
YAB1
<---------
MYB46(3)
-------->
HAHB4
--------->
HSFC1(1)
<---------
YAB1
<---------
HSFB2a(2)
--------->
AHL20(2)
--------->
HSFB2a(2)
<---------
AHL20(1)
<---------
HSFC1(1)
--------->
AHL20(2)
<---------
KAN4(1)
----------->
GT1
<---------
AHL20(2)
<---------
LBD16
------->
TEIL
<------
MYB46(1)
---
<----------
DOF2
<---------
REM1(2)
<---------
YAB1
<---------
AtMYB61
<-------
-
ZAT6
<---------
YAB1
--------->
ARR14(2)
--------->
YAB1
<---------
ZAT6
--------
-------->
DOF2
<---------
AHL20(2)
<----------
DOF2
<-----------
RAV1(1)
<-------
--->
CCA1(2)
<---------
AHL20(2)
<---------
ICU4
>>>>>>>
ZML2
<--------
P
---------->
ID1
agaaagactttataatttaattatagcctatacggagataatactttcatgaatgttctagaaatagtgttggttaatttttgttttgtttagtcgttat
17875300
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AGI:
At4g38060.1
Description:
similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G65480.1); similar to unknown [Lycopersicon esculentum] (GB:AAK84476.1)
Range:
from: 17873831
to: 17874798
Orientation: Reverse
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.