Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                      <------ZmHOX2a(2)                                                                                   <---------ARR11(3)                                                           --------->TOE1(3)       --------->ARR11(3)                                                           --------->YAB1------>MYB83------>ZmHOX2a(2)                                                         <---------ARR11(3)        <---------ARR14(2)                                                         --------->ARR11(3)   --------->ARR14(2)                                                       <---------AHL20(2)------>MYB46(1)                                                    --------->YAB1      --------->ANAC46                                                 --------->YAB1         --------->ANAC58       <-----                                               ------>ZmHOX2a(1)        --------->ANAC58     --------                                              --------->TOE2(3)        --------->MYB46(3)  <---------LBD16 --------->At5g28300    <---------ZAT18     ------>ZmHOX2a(1)        -------->P    --------->ARR14(2) ---------->GT1----------->HVH21           <---------ALFIN1--------->TOE2(3)  <---------ARR14(2)   cacagtaaaaacagcaaatgacgcagtgccttcactcttcttgctcctccttaataataaatcttaacatctaccagccatatacgatcttcatccgcgt  15567900                                                                    <------ZmHOX2a(1)                                                               <----------DOF2                                                           <-----------------AG                                                         <---------AHL20(2)                                    <---------AHL20(2)   --------->AHL20(2)                                    --------->AHL20(2)  --------->AHL20(2)                          <                                 <---------AHL20(2)     <---------AHL20(2)                          <    --------->At5g28300         --------->AHL20(2)   <---------AHL20(2)       --------->ATHB51      -   ----------->GT1              <---------AHL20(2)  <---------AHL20(2)        <---------ICU4     <--- --------->ZAT2            <---------GLK1(2)        --------->AHL20(2)       <---------YAB1     ----- <---------ZAT2       <---------ALFIN1              --------->AHL20(1)       --------->ICU4     <---- ------HVH21        ----------->RAV1(1)             <---------AHL20(1)    <-------TEIL ---------->DOF2 ->LBD16      --------->YAB1 --------->AHL20(2)    --------->AHL20(2)---------->DOF2  <---------ATHB12   ccaagctgtaattcattcatagcaacacagattatttattaattgtttacaaaattaattttattctttaggaaagttcattatttcaataaagcttatt  15568000                         <---------YAB1                              --------->YAB1                     <---------AHL20(2)                              --------->AHL20(2)                     --------->AHL20(1)                           --------->YAB1                    <---------AHL20(2)                           <---------YAB1                    --------->YAB1                               --------->ICU4                    --------->ATHB51                           <---------ICU4                    --------->AHL20(2)                         --------->YAB1            --------->KAN4(1)                                 --------->ICU4           <---------KAN4(2)                                  <---------YAB1 ---------ATHB51    <--------HAHB4                          --------->YAB1 ---------AHL20(2)  -------->ATHB1   ------>MYB83         --------->AHL20(2) -------->AHL20(2)  <---------ICU4   ------>MYB46(1)   <---------AHL20(1) ------AHL20(2)    <---------ATHB51<---------MYB46(2)  <---------AHL20(2) ---->AHL20(2)     <---------ATHB12--------->MYB46(3)  --------->AHL20(2)                <------MYB46(1) -----AHL20(2)     --------->ICU4 --------->ANAC46     --------->AHL20(1)                <------MYB83   aaataattcgaagaacattcaattattttgatactcaccaaacaaaaattagagcaataaaataataataataaaaaatagagaaacgatttggttttta  15568100                                               ------->TEIL                                           <---------------AtSPL3                --------->ARR11(3)                                    --------->AHL20(2)                           <---------AHL20(1)                                    <---------AHL20(2)                      --------->AHL20(2)                                <---------AHL20(2)                          <---------AHL20(2) ------                          ----------->GT1  <---------------AtSPL8    --------->YAB1           -------                        --------->CCA1(2)  --------------->AtSPL8   --------->ICU4          ---------              ----------->GT1   --------->AHL20(2)             <---------ANAC58  --------->AHL20(1)             --------->DAG2     --------->AHL20(1)             <---------ANAC58 <---------AHL20(2)            ---------->DOF2    --------->AHL20(2)    <---------CCA1(2)  --------->YAB1   --------->ANAC46   aaatttgaaaaactaaaagtaaaatgatatgaaaaaaattaaaaatgtgtacctcatatcaattttcgtaagaatgatataaatattttgcacaaaacag  15568200                                                         <------------CBF                                                       --------->ARR11(3)                     <------                                                   ---------->DOF2                         --------->AHL20(2)                                                  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)--------->AHL20(2)      ---------->DOF2                     ----------->HVH21                           --------->AHL20(1) ---------->DOF2                         <-----------HVH21           <---------MYB46(3)    --------->YAB1 ----->GT1      ----------->GT1         <---------DEAR3(2)           --------->MYB52(2) --------->YAB1 ----------------->ANAC81       <---------ANAC58------>MYB83--------->ATHB12<---------------AtSPL8 >MYB52(1) ------------>CBF     <---------ANAC58------>MYB46(1)     <-------TEIL     --------->YAB1--   agaaaaagaaaagaacaatagtataaacgtatgggcttgggccggtcacctagcaaagttattgaatgggttcgttcagtagtacaaaaataataaaaat  15568300                                                                                     <---------YAB1                                                                                   --------->YAB1   <                     ---------->DOF2                                        ----------->TGA1       --      *TSS        <---------YAB1                              <------ZmHOX2a(1)   --------->ICU4   --   <---------ATHB12 <---------AHL20(2)                 <---------At4g35610<---------ICU4        <---- ---ICU4       <---------AHL20(2)      ---------->DOF2 --------->At4g35610--------->YAB1        ----- ---------->CBF<---------YAB1   <------ZmHOX2a(1)    <---------RAP2.6(2) --------->ICU4 --------->CCA1(2)   tcccaatcgatcgaaatattattaaaagagggaaggagcaaaaaagccctaattttcggctggaggagcaagacgatgatgacgatgatgatatgaagga  15568400            <---------ZAT18            --------->ZAT18           --------->ALFIN1        --------->LBD16       <---------ANAC55(1)       <---------ANAC46       <---------ANAC55(2)       <---------ANAC58       <---------ANAC58      <-----------------------TaNAC69(2)      ------>ZmHOX2a(2)     <------ZmHOX2a(2)    --------->ARR14(2)                                                             <---------YAB1    <---------ARR14(2)                                                           <---------AHL20(2) --------->TOE1(1)                                                              --------->AHL20(2) --------->TOE2(1)                                                             <---------WOX13(1) ---------LBD16                        --------->YAB1                        --------->ATHB12 ------->TOE1(2)                     ------->TEIL     ------>ZmHOX2a(1)    <---------WOX13(1) ------->TOE2(2)          --------->DEAR3(1)          --------->LBD16    --------->ATHB12    ------->TEIL -----ARR14(2)          --------->At4g35610   ------->TEIL              <---------ATHB12  <---------WOX13(1) ---->ARR14(2)          <---------At4g35610<---------YAB1        <----------DOF2<---------AHL20(2)<--   acctcggatccgtgtgcgcgaaggtgagccgaagacatgaatcatatgaatgtttcctggtcttgttctttccagtgattgatttatttttgatggatgt  15568500                      ------>ZmHOX2a(2)                    <---------ARR14(2)                    --------->ARR14(2)                    <---------ARR11(3)                    --------->ARR11(3)                    --------->AGP1                   <---------GLK1(1)                   --------->GLK1(1)              <---------ARR14(2)            --------->LBD16           <------NtERF2           --------->ANAC58           --------->ANAC46                                                                        --           --------->ANAC58                                                                        --          --------->LBD16                                                                       <----          <------NtERF2                                                                         <----          ------>NtERF2 ------>ZmHOX2a(1)                                                       -----          --------->At4g35610                                 <----------DOF2                   -----          <---------LBD16---------->DOF2                     --------->HSFB2a(1)                <----          <---------At4g35610                                --------->HSFC1(2)            <---------TOE2(3)        <---------RAP2.6(2)                                  <---------HSFB2a(1)       <---------ANAC58        <---------DEAR3(1)                         ---------->DOF2                     <---------ANAC58        <---------RAP2.3(2)                      >>>>>>>>>RAP2.2              ------>ZmHOX2a(1)------   <---------MYB52(1)<------ZmHOX2a(2) --------->ALFIN1      <---------HSFC1(2)   --------->ATHB12--- ---------GT1<---------SPL7  --------->ZAT6   --------->WOX13(1)    --------->ANAC46  <---------MYB46(3)   ttacagtttggccgcggaacgagatcctatagcactaagaggtctggccaatctaaagatagaactttctccaccatgtcctcttcattggttgaggcag  15568600         --------->LBD16        <-----------------AG        <---------LBD16     <---------GLK1(1)   <------ZmHOX2a(1) ------->At4g35610                                                  --------->CCA1(2) ------->ZAT2---------->DOF2                         <---------ZAT2<---------ARR14(2) --NtERF2--------->ETT(1)                            --------->At4g35610 -----ZAT2 <------NtERF2                             <---------At4g35610                 ------->TEIL ---->ZAT2--------->LBD16             <---------ANAC58             --------->ARR14(2) --------->ANAC58 ---->At4g35610            <---------ANAC46        <-----------RAV1(2) ---------->DOF2<---------MYB52(2) -----At4g35610            <---------ANAC58       <-------TEIL    <------ZmHOX2a(1)   --------->ANAC58 ----->RAV1(1)--------->DAG2          <---------ANAC58<-----------RAV1(2)         <-----------HVH21 < -------->RAV1(1)          <---------ANAC58  <-----------RAV1(2)<---------ANAC46------->TEIL  -------   cagcaggattgccggaaaagggtttgatggtgtgcaaatggctaggcacaggttcagcaggttatggaggatacaaagcctgtatgtcacgaacattgat  15568700                                                                                                  <--                                                                                        --------->At4g35610                               <-----------RAV1(1)                                      <---------At4g35610                  <----------DOF2          <---------MYB46(3)                           <---------ZAT2          <---------DAG2<---------DAG2  <-----------RAV1(1)                             --------->ZAT2 ----------DOF2<-----------GT1<---------TOE2(3)                                         ----------->RAV1(2) -->ATHB12<----------DOF2<----------DOF2------>ZmHOX2a(1)   <---------TOE2(3)         <-----------RAV1(2)   ttcttttctctcctttttttctttagccttttgatgttgttcctgttgttgttgttgttgttaagaattgggtttttttttttttgttccagctgagtat  15568800  Previous    Next  AGI:  At4g32240.1    Description:  unknown protein Range:  from: 15568306    to: 15569211    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version