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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
<------
ZmHOX2a(2)
--------->
ARR11(3)
--------->
YAB1
------>
MYB83
------>
ZmHOX2a(2)
--------->
TOE1(3)
--------->
ARR14(2)
--------->
ARR11(3)
<---------
ARR11(3)
<---------
ARR11(3)
--------->
ARR14(2)
<---------
AHL20(2)
------>
MYB46(1)
--------->
YAB1
--------->
ANAC58
--------->
YAB1
--------->
ANAC46
<-----
------>
ZmHOX2a(1)
--------->
ANAC58
--------
--------->
TOE2(3)
--------->
MYB46(3)
<---------
LBD16
--------->
At5g28300
<---------
ZAT18
------>
ZmHOX2a(1)
-------->
P
<---------
ARR14(2)
---------->
GT1
----------->
HVH21
<---------
ALFIN1
--------->
TOE2(3)
<---------
ARR14(2)
cacagtaaaaacagcaaatgacgcagtgccttcactcttcttgctcctccttaataataaatcttaacatctaccagccatatacgatcttcatccgcgt
15567900
<------
ZmHOX2a(1)
<----------
DOF2
<-----------------
AG
<---------
AHL20(2)
--------->
AHL20(2)
--------->
AHL20(2)
<---------
AHL20(2)
<---------
AHL20(2)
-
<---------
AHL20(2)
--------->
AHL20(2)
<
--------->
At5g28300
<---------
AHL20(2)
<---------
AHL20(2)
<---------
ICU4
<
----------->
GT1
--------->
AHL20(2)
--------->
AHL20(1)
--------->
ATHB51
<---
<---------
ZAT2
<---------
GLK1(2)
<---------
AHL20(1)
--------->
ICU4
<----
--------->
ZAT2
<---------
ALFIN1
--------->
AHL20(2)
<---------
YAB1
-----
------
HVH21
----------->
RAV1(1)
<---------
AHL20(2)
<-------
TEIL
---------->
DOF2
->
LBD16
--------->
YAB1
--------->
AHL20(2)
--------->
AHL20(2)
---------->
DOF2
<---------
ATHB12
ccaagctgtaattcattcatagcaacacagattatttattaattgtttacaaaattaattttattctttaggaaagttcattatttcaataaagcttatt
15568000
<---------
YAB1
--------->
AHL20(2)
--------->
AHL20(1)
--------->
YAB1
<---------
AHL20(2)
--------->
YAB1
--------->
ATHB51
--------->
ICU4
--------->
YAB1
<---------
YAB1
<---------
ICU4
--------->
YAB1
--------->
AHL20(2)
<---------
ICU4
--------->
KAN4(1)
--------->
ICU4
<---------
KAN4(2)
<---------
YAB1
-------->
AHL20(2)
<--------
HAHB4
------>
MYB83
--------->
YAB1
---------
AHL20(2)
<---------
AHL20(2)
--------->
AHL20(2)
---------
ATHB51
-------->
ATHB1
------>
MYB46(1)
--------->
AHL20(2)
------
AHL20(2)
--------->
ICU4
--------->
ANAC46
<---------
AHL20(2)
-----
AHL20(2)
<---------
ATHB12
--------->
MYB46(3)
--------->
AHL20(1)
<------
MYB46(1)
---->
AHL20(2)
<---------
ATHB51
<---------
MYB46(2)
<---------
AHL20(1)
<------
MYB83
aaataattcgaagaacattcaattattttgatactcaccaaacaaaaattagagcaataaaataataataataaaaaatagagaaacgatttggttttta
15568100
------->
TEIL
--------------->
AtSPL8
<---------
AHL20(1)
--------->
AHL20(2)
--------->
ARR11(3)
<---------
AHL20(2)
--------->
AHL20(2)
--------->
AHL20(2)
<---------
AHL20(2)
------
----------->
GT1
<---------------
AtSPL3
--------->
YAB1
-------
--------->
CCA1(2)
<---------------
AtSPL8
--------->
ICU4
---------
----------->
GT1
--------->
AHL20(1)
<---------
ANAC58
--------->
AHL20(1)
--------->
DAG2
<---------
AHL20(2)
<---------
ANAC58
<---------
AHL20(2)
---------->
DOF2
--------->
AHL20(2)
<---------
CCA1(2)
--------->
YAB1
--------->
ANAC46
aaatttgaaaaactaaaagtaaaatgatatgaaaaaaattaaaaatgtgtacctcatatcaattttcgtaagaatgatataaatattttgcacaaaacag
15568200
<------------
CBF
--------->
ARR11(3)
<------
---------->
DOF2
--------->
AHL20(2)
xxxxxxxxxxxxxxxxxxxxxxx>
smallRNA(i2)
--------->
AHL20(1)
---------->
DOF2
----------->
HVH21
--------->
AHL20(2)
---------->
DOF2
<-----------
HVH21
--------->
MYB52(2)
--------->
YAB1
----->
GT1
----------->
GT1
<---------
DEAR3(2)
<---------
MYB46(3)
--------->
YAB1
----------------->
ANAC81
<---------
ANAC58
------>
MYB46(1)
<-------
TEIL
--------->
YAB1
>
MYB52(1)
------------>
CBF
<---------
ANAC58
------>
MYB83
--------->
ATHB12
<---------------
AtSPL8
--
agaaaaagaaaagaacaatagtataaacgtatgggcttgggccggtcacctagcaaagttattgaatgggttcgttcagtagtacaaaaataataaaaat
15568300
<---------
YAB1
--------->
YAB1
<
---------->
DOF2
----------->
TGA1
--
*
TSS
<---------
YAB1
<------
ZmHOX2a(1)
--------->
ICU4
--
<---------
ATHB12
<---------
AHL20(2)
<---------
At4g35610
--------->
YAB1
-----
---
ICU4
<---------
YAB1
<------
ZmHOX2a(1)
<---------
RAP2.6(2)
--------->
ICU4
<----
---------->
CBF
<---------
AHL20(2)
---------->
DOF2
--------->
At4g35610
<---------
ICU4
--------->
CCA1(2)
tccca
atcgatcgaaatattattaaaagagggaaggagcaaaaaagccctaattttcggctggaggagcaagacgatgatgacgatgatgatatgaagga
15568400
--------->
ZAT18
<---------
ZAT18
--------->
ALFIN1
--------->
LBD16
<---------
ANAC55(1)
<---------
ANAC58
<---------
ANAC55(2)
<---------
ANAC58
<---------
ANAC46
------>
ZmHOX2a(2)
<-----------------------
TaNAC69(2)
<------
ZmHOX2a(2)
--------->
ARR14(2)
<---------
YAB1
<---------
ARR14(2)
<---------
AHL20(2)
--------->
TOE2(1)
--------->
AHL20(2)
--------->
TOE1(1)
<---------
WOX13(1)
---------
LBD16
--------->
YAB1
--------->
ATHB12
------->
TOE2(2)
------->
TEIL
--------->
LBD16
<---------
WOX13(1)
------->
TOE1(2)
--------->
DEAR3(1)
------>
ZmHOX2a(1)
--------->
ATHB12
------->
TEIL
---->
ARR14(2)
<---------
At4g35610
------->
TEIL
<---------
ATHB12
<---------
WOX13(1)
-----
ARR14(2)
--------->
At4g35610
<---------
YAB1
<----------
DOF2
<---------
AHL20(2)
<--
acctcggatccgtgtgcgcgaag
gtgagccgaagacatgaatcatatgaatgtttcctggtcttgttctttccagtgattgatttatttttgatggatgt
15568500
------>
ZmHOX2a(2)
<---------
ARR14(2)
--------->
AGP1
--------->
ARR11(3)
<---------
ARR11(3)
--------->
ARR14(2)
<---------
GLK1(1)
--------->
GLK1(1)
<---------
ARR14(2)
--------->
LBD16
--------->
ANAC46
--------->
ANAC58
--------->
ANAC58
--
<------
NtERF2
--
------>
NtERF2
<----
--------->
LBD16
-----
<---------
At4g35610
<----
--------->
At4g35610
<----------
DOF2
<----
<---------
LBD16
---------->
DOF2
<---------
HSFB2a(1)
-----
<------
NtERF2
------>
ZmHOX2a(1)
--------->
HSFC1(2)
<---------
TOE2(3)
<---------
RAP2.3(2)
--------->
HSFB2a(1)
<---------
ANAC58
<---------
RAP2.6(2)
---------->
DOF2
<---------
ANAC58
<---------
DEAR3(1)
>>>>>>>>>
RAP2.2
------>
ZmHOX2a(1)
------
<---------
MYB52(1)
<------
ZmHOX2a(2)
--------->
ALFIN1
<---------
HSFC1(2)
--------->
ATHB12
---
---------
GT1
<---------
SPL7
--------->
ZAT6
--------->
WOX13(1)
--------->
ANAC46
<---------
MYB46(3)
ttacag
tttggccgcggaacgagatcctatagcactaagaggtctggccaatctaaagatagaactttctccacc
atgtcctcttcattggttgaggcag
15568600
--------->
LBD16
<-----------------
AG
<---------
LBD16
<---------
GLK1(1)
<------
ZmHOX2a(1)
------->
ZAT2
---------->
DOF2
--------->
CCA1(2)
------->
At4g35610
<---------
ZAT2
<---------
ARR14(2)
-----
ZAT2
<------
NtERF2
<---------
At4g35610
---->
At4g35610
--------->
At4g35610
------->
TEIL
-----
At4g35610
<---------
ANAC58
--------->
ARR14(2)
--------->
ANAC58
--
NtERF2
--------->
ETT(1)
<---------
ANAC58
<-----------
RAV1(2)
---------->
DOF2
--------->
ANAC58
---->
ZAT2
--------->
LBD16
<---------
ANAC46
<-------
TEIL
<------
ZmHOX2a(1)
<---------
MYB52(2)
----->
RAV1(1)
--------->
DAG2
<---------
ANAC58
<-----------
RAV1(2)
<-----------
HVH21
<
-------->
RAV1(1)
<---------
ANAC58
<-----------
RAV1(2)
<---------
ANAC46
------->
TEIL
-------
cagcaggattgccggaaaagggtttgatggtgtgcaaatggctaggcacaggttcagcaggttatggaggatacaaagcct
gtatgtcacgaacattgat
15568700
<--
<---------
At4g35610
<-----------
RAV1(1)
--------->
ZAT2
<----------
DOF2
<---------
MYB46(3)
----------->
RAV1(2)
<----------
DOF2
<----------
DOF2
<-----------
RAV1(1)
--------->
At4g35610
----------
DOF2
<-----------
GT1
<---------
TOE2(3)
<---------
ZAT2
-->
ATHB12
<---------
DAG2
<---------
DAG2
------>
ZmHOX2a(1)
<---------
TOE2(3)
<-----------
RAV1(2)
ttcttttctctcctttttttctttagccttttgatgttgttcctgttgttgttgttgttgttaagaattgggtttttttttttttgttccag
ctgagtat
15568800
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AGI:
At4g32240.1
Description:
unknown protein
Range:
from: 15568306
to: 15569211
Orientation: Forward
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.