Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                           <---------ZAT2--------->ARR14(2)     <----------DOF2                  --------->ATHB12                   --------->At4g35610  --------->ARR11(3)             <---------ANAC58                        --------->ZAT2<---------ARR14(2)  <---------ARR11(3)             <---------ANAC58                        <---------At4g35610 -------->ANAC58           <---------YAB1                                --------->HSFC1(2) -------->ANAC58           <---------AHL20(2)                            <---------HSFB2a(1) -----ID1               <----------DOF2                                  <---------HSFC1(2)---------- -->DOF2           <-----------GT1   <---------YAB1                      --------->HSFB2a(1)      ---   acaagaactttgctcaaaaattcactctttttattgcttatcattgaatacttctattgaaactagataactcgaagctcccatttccaaatcccctgta  15059400                                                                             <---------ZAT2                                                                            --------->ANAC58                                                             --------->At4g35610        --------->TOE1(2)                                                  <------ZmHOX2a(1)         --------->ANAC58                                ---------->DOF2<-----------RAV1(2)       --------->At4g35610    ----- ->RAV1(2)         <------ZmHOX2a(1)<---------------------WRI1        --------->At4g35610   <------ZmHOX2a(1) ------>ICU4 ---------->DOF2 <------ZmHOX2a(1) <---------LBD16  --------->At4g35610<------ZmHOX2a(1)   attagtttgagaaaaaaaagaggagttttgaggagaaaggagaagagtaccaggagaaacacgagcagaagaagcagcaagcttaggaaccctaggaaga  15059500        --------->TCP20        --------->TCP15(1)        --------->TCP11(2)        --------->ZAT18        --------->TCP16(1)        <---------PCF2        --------->PCF5       ----------->TCP11(1)                <---------ICU4       <---------TCP23                    --------->ICU4     --------->ALFIN1                  <-------TEIL                  --------->CCA1(2)   <-----------RAV1(1)         <----------ID1                   --------->At4g35610       ----------- ---->ARR11(3)             ---------->DOF2<---------YAB1    --------->ANAC46             ----------->GT1   cattgctgtgggccctgagaaaccaatagcaaagaaacaaattcattatgggaaactcatccaagtagcagagatgggcaatagacaagagttggaaaaa  15059600                  <------ZmHOX2a(1)                                   --------->ANAC58                <---------TOE2(3)                                     --------->ANAC58                --------->ANAC58        --------->REM1(2)         <---------HSFB2a(2)    <----------DOF2                    ----------->HVH21          --------->HSFB2a(2)   --------------->AGL15             <---------ANAC46             <---------HSFC1(1)  <-----------------AGL3             <---------ANAC58            <---------LBD16  <-----------------AGL2    --------->DAG2                     <---------ARR14(2)  <-----------------AG     ---------->DOF2                     --------->GLK1(2)  --------->At4g35610 >GT1           --------->ANAC58     <---------ANAC58  --------->GLK1(2)          <---------At4g35610   tgaagccttttttgggataaggaatttgaaaaaggaataccgtgaaggcgaagagagaatcagcaattctggaagccattgggaagcagaaaatgcagaa  15059700                                                                 <---------ALFIN1                        --------->LBD16                         ----------->HVH21          --------->LBD16                                   --------->ZAT18         --------------------->WRI1                         <---------ZAT18         --------->LBD16------>NtERF2                  --------->REM1(2)        --------->LBD16<---------ETT(1)                <---------ZAT14    <---------ALFIN1   --------->ANAC46                --------->ZAT14   <-----------GT1            *TSS ----------->HVH21    <---------LBD16        --------->ATHB12 --------->RAP2.3(3)   <---------At4g35610   gaagcgaccccccgagagagtttctccggcaatatgtcttatgagattgaatggctgtgaagagccctcacctcttcaccttcttcagcaaattggactt  15059800                                                                                                -----                                                                                       --------->ATHB12                                                                                       --------->YAB1               <------------------------ANAC81                                         <--------ATHB1              <------MYB83                                                             <---------ICU4              <---------ANAC46                                                        <---------YAB1              <------MYB46(1)                                                         --------->ICU4             --------->MYB59                                                          <---------ATHB12        <---------TOE1(3)                                                         ------------>CBF        <---------TOE2(3)         <----------DOF2                         --------->DAG2   --------->YAB1       ---------->DOF2     <-----------GT1                               ---------->DOF2 <---------YAB1    --------->YAB1    ---------->ID1                                 <---------HSFB2a(2) <---------WOX13(1)   ccacaattttaaagttgggtttttgtttttttcagtctttttttttttgtcagaaactaaaattttgcatactagaaaagtcgaaacaatgattaatagt  15059900                                                                                             <-------                                                                                          --------->AHL20(2)                                                                                          --------->YAB1                                      -------->ATHB1                                     <---------YAB1                                      --------->ATHB51                   --------->AHL20(2)  --------                                      --------->ATHB12              <---------YAB1       --------->ICU4                                      <---------ICU4               <-----------GT1    <---------YAB1                                     --------->ICU4              <---------YAB1      <---------ARR11(3)        <---------AHL20(2)           <---------YAB1    ----------->GT1   <---------AHL20(2) <--------       --------->AHL20(2)          <---------ICU4   --------->DAG2<---------ICU4     --------->ARR11(3)    --------->AHL20(2)           <---------TOE2(3) ---------->DOF2--------->YAB1    --------->YAB1    <---------AHL20(2)      ----------->GT1 ----------->GT1      --------->ICU4   <---------TOE2(3) ------->CBF         <---------------AGL15<---------LBD16  --------->MYB59       ---------->DOF2   caatatttatttaatacagaataacaaaaatggttaagaattattggggaaaaaaaagggttagataattatcaattttttgttaaagataattataaat  15060000                              ------>ZmHOX2a(1)                             --------->TOE2(3)                         --------->KAN4(2)                        --------->HSFC1(2)                        <----------TaMYB80                        <---------KAN4(1)                        --------->HSFB2a(1)     --------->YAB1     --------->KAN4(1)                                                    <-------    <---------YAB1      <---------HSFB2a(1)           ------>MYB46(1)           <---------AHL20(2)    ----------->GT1    <---------KAN4(2)              ------>MYB83              --------->AHL20(2) --AHL20(2)            ---------->TaMYB80           --------->TOE2(3)        <---------ICU4  -------- ->AHL20(2)            --------->ARR14(2)           <---------MYB59  ------>ZmHOX2a(1)       -------- -YAB1                 <---------ARR14(2)        <-----------GT1     <----------DOF2  --------->YAB1   ttcaaaatgataaatccaaaactcgaatattcctaaaatatgttctcatataaacctaatttcatggggtcctttctaatatttatatttataaacctaa  15060100       <------MYB46(1)       <------MYB83     <--------P  <---------TOE1(3)  <---------TOE2(3)                     --------->ARR11(3) <-----------RAV1(2)                    <---------ARR14(2) --MYB59                                --------->ARR14(2) ->TOE2(3)      ----------->GT1         <---------ARR11(3)        <---------AHL20(2)           <----- ->TOE1(3)   --------->ALFIN1      ----------->GT1        ---------->DOF2                      ------   atttcaggttggcaagttgggcaaaaactgaaatttttggtaaatcttcatactcaaaatcaaagtattttttttgtggagaactgtattagtttaaaaa  15060200                      <---------YAB1                    -------->HAHB4                    --------->YAB1                   <---------YAB1           <<<<<<<<<RAP2.2                              <---------ANAC58          <---------TOE2(3)                             <---------ANAC58 ----AHL20(2)      ----------->GT1               --------->AHL20(2)     --------->YAB1 --->AHL20(2)      --------->ICU4               <---------YAB1      --------->AHL20(2)        -------   aattcagagttttagattgtaatgataaatatcaattggagtctatgtctattatttagcttgttcacaaatatttataaactaatacaattctccacta  15060300  Previous    Next  AGI:  At4g30950.1    Description:  FAD6 (FATTY ACID DESATURASE 6); omega-6 fatty acid desaturase. Identical to Omega-6 fatty acid desaturase, chloroplast precursor (FAD6) [Arabidopsis Thaliana] (GB:P46312;GB:Q9M094); similar to FAD8 (FATTY ACID DESATURASE 8), omega-3 fatty acid desaturase [Arabidopsis thaliana] (TAIR:AT5G05580.1); similar to omega-6 fatty acid desaturase [Descurainia sophia] (GB:ABI73993.1); similar to omega-6 desaturase [Brassica napus] (GB:AAT65203.1); similar to Omega-6 fatty acid desaturase, chloroplast precursor (GB:P48627); contains InterPro domain Fatty acid desaturase, type 1; (InterPro:IPR005804); contains InterPro domain Fatty acid desaturase, type Range:  from: 15056981    to: 15059800    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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