Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                     ----------->HVH21               <---------SPL7                                  --------->DAG2          <------NtERF2<---------MYB59      --------->CCA1(2)---------->DOF2        <---------ANAC46             ----------->RAV1(2) --------->AtLEC2        <---------ANAC58             <---------ANAC58    --------->ANAC58        <---------RAP2.6(2)          <---------ANAC58    --------->ANAC46 ----->DOF2  <---------------AtSPL3<---------ARR14(2)    --------->ANAC58                       <---- >DOF2  <---------ANAC58       <---------At4g35610 --------->GLK1(1)<----------CDC5             -----   aagagccatggcgtcttcgtactgacccaattcagcgtagcctgagataagagagttccaagcaaaaggcgatgagtctctcttagacattcgatcgaac  12938400                                                                        --------->HSFB2a(2)                                                                        --------->ANAC58                                                                        <---------ANAC55(2)                                                                        --------->ANAC58                                                                        <---------HSFB2a(2)                --------->ANAC46              <---------HSFC1(2)       <---------LBD16               --------->LBD16               --------->ANAC58      <---------MYB46(3)        -------- <---------ANAC58                <------NtERF2--------->HSFC1(2)  <--------P           <------MYB83 <---------ANAC46              <---------ANAC58               <-----------RAV1(2)      <------MYB46(1) <---------ANAC58--------->REM1(2)           --------->ANAC58<---------LBD16     --------->CCA1(2) -----ALFIN1  <---------ANAC46 <---------ANAC58         <---------GLK1(1)      --------->CCA1(2) ---->ZAT6   <---------LBD16   <---------ANAC46         --------->GLK1(1)--------->LBD16     <-------   acttcgtgtgcaacttccgcgtagccacaagaggcgtagagtctaacaagcttcgatgaaatccccaggttgttccgcaagagatagggaggtataaggt  12938500                                                                           <---------MYB52(1)                                                                          <-------GAMYB                                                                         <------MYB46(1)                                                                ------>ZmHOX2a(2)                                                               <---------GLK1(1)                                                               <------ZmHOX2a(2)                                                               --------->GLK1(1)                                                              <---------AGP1                                                              <---------ARR14(3)                                                              <---------ARR14(2)                                                              --------->ARR14(3)                   <-                                                              <-----------ARR10                    <-         --------->ANAC58                     <---------HSFB2a(2)        <------MYB83          ------         --------->ANAC58        <---------REM1(1)            --------->ARR11(3)               <-----   --------->ZAT6              --------->At4g35610            --------->ARR14(2)        <---------DAG2  ------->TEIL                 <---------At4g35610          ----------->ARR10     --------->At4g35610 ->DAG2  --------->ANAC46  ----------------------->TaNAC69(2) <---------ARR11(3)  <---------At4g35610 --TOE2(3)        <---------WRKY38(1)         --------->HSFB2a(2)       --------->MYB59 <----------DOF2   gatgaactctaacgccatggtcaatagctcttaagctgtagcaggtctcgagaagagaagcgaagatctctggttcggttaatgagatgcctttttgagc  12938600                                                                                             <------MYB83                                                                                             <------MYB46(1)                                                                                             <-------                                                                                            <--------                                               --------->At4g35610                          <--------                                               --------->LBD16                              ---------                                             <-----------RAV1(2)                        <---------MYB46(3)                                             --------->SPL7                             <------MYB83                                           <---------SPL7                               <------MYB46(1)                                          <------MYB83                             <---------ANAC46                                          <---------ANAC58                      --------->ALFIN1  <---------ARR14(2)                      <---------ANAC58                    <---------ANAC46 --------TOE2(2)                          <------MYB46(1)                     --------->ALFIN1 --------AtMYB61                         --------->MYB59                     <------ZmHOX2a(1) --->At4g35610              ---------->DOF2<-----------HVH21        ================HOX2a_HOX2a  ---- ----At4g35610   ----------->HVH21       <---------MYB46(3)         <------ZmHOX2a(2)  <---------AtMYB61   ggaggtttcgaggtctgtaatgacagagtctaaagcttcgagttgggtccggtgaatggattgtttttcgatcaagagaggagtgggggatggtttggtg  12938700                                                          <------MYB83                                                         <---------AtMYB61                                                         <---------MYB46(3)                                                        <---------MYB52(1)                                                      <-----------RAV1(1)                                                    <---------At4g35610        ----------->GT1                           --------->REM1(1) --ANAC46                                      <---------ANAC58 -MYB46(3)                                     <---------ANAC58 -AtMYB61                                      <---------ANAC46                 --------->ATHB12 >MYB46(2)         <-----------RAV1(1)    --------->ALFIN1<------MYB46(1)      <---------YAB1 ------>DOF2 <---------ARR14(2)           <-----------RAV1(1)              <----------DOF2    <------   aaagagagggaagtgaatccattgttgttgtattggttttgtctgtgttgcttcaactgttggtgatgtctgggtttctttttcattgaagaagacgata  12938800                        <---------ZAT18                        --------->ZAT18                                      <-------GAMYB                      <---------------AtSPL8                                --------->MYB111(2)                 <------MYB46(1)                                            <---------MYB46(3)                 <------MYB83                                           <---------TOE2(3)               XXXXXXXXXXXXXXXXXXXX>MIR778                            ------>ZmHOX2a(1)             <---------HSFC1(2)                                       <---------MYB52(1)             --------->HSFC1(2)      --------->ANAC46          <-----------GT1 ---ARR14(2)--------->GLK1(2)   --------->ARR14(2)     ---------->ID1--------->TOE2(3)          <----   cagatggataagagaagcttggtttgtgtacaacgatactcaccatcttcttctcttgtctctattttcttccttaggttgttgataatcgataaatgga  12938900                                                                                         <---------MYB52(2)                                                                                 --------------->AtSPL8                                                                           --------->TOE2(3)                                  <---------ANAC58                         --------->TOE1(3)                                  <---------ANAC46            <----------DOF2    <---------------AtSPL8                                  <---------ANAC58         ---------->ID1  <---------MYB59------->GAMYB                               <----------DOF2     <---------AHL20(2)      --------------->AGL15  --------->At4g35610       <-----------GT1  --------->ANAC55(2)           <---------------AGL15  <---------At4g35610    --------->YAB1      <---------ANAC55(2)        <-----------GT1  --------->MYB46(3) -----ANAC46          --------->TOE2(3)     <-------TEIL--------------->AtSPL8  ---------->DOF2   ---   gggaagcagagtcttgtgagaatacattaataactttcgtagaagttacatatttttttttgttcttttttgttttaccttacaaagtacaacaaacaaa  12939000                                                                                              ------>MYB83                                                                                              ------>MYB46(1)                                                                                            <--------                                                                                            <--------                                                                                            <--------                                      <---------YAB1                                        <--------    ------------>CBF     <---------ZAT18                                     --------->ICU4--------->ANAC46    <-------TEIL         --------->ZAT18     --------->ICU4          <----------DOF2     <-----------GT1 ------->DOF2<------------CBF      <-------TEIL                 <---------AtMYB61  ------->TEIL   aaaagatgcaatgcgaattgcatatagtgcatcaaaattcatgagtaatgaacaaatttcagactggtggtcttttgtcaagatgaattttctaccaaac  12939100                                                            --------->AHL20(2)                                                   --------->ANAC58                                                   --------->ANAC46                                                   --------->ANAC58                                                <---------At4g35610         --------->ZAT6                        <---------AtLEC2        --------->ZAT14     <---------At4g35610 -MYB111(1)             --------->ANAC55(2)     <---------ZAT18   <-----------RAV1(2) -MYB111(2)           <-----------GT1     <------------CBF  --------->AHL20(1) -MYB59            <---------ARR14(2)  ------------>CBF     <---------AHL20(2) -MYB46(2)         --------->ARR14(2) ------>ZmHOX2a(1)    --------->AHL20(2)   tcgaaccgagatgggactgtggatttacatgactactctccttcaattgctgcacacaaaaaaaaattgcaggtgttaacacaaatcgtgttctactcaa  12939200           ----------->GT1          ------>ZmHOX2a(2)                                             <------ZmHOX2a(1)         --------->At4g35610                                           <------MYB46(1)       <---------ZAT14                                <---------ATHB12 <------MYB83             <----    <---------ANAC46                            --------->TOE1(3)     --------->MYB59    <---------ANAC46    <---------ANAC58                 --------->ARR11(3)    ----------->GT1               <---------ANAC58    <---------ANAC58         ---------->DOF2    --------->TOE2(3)    <--------P          <---------ANAC58   aatatggagtgatctgtaatacagtgagagagaaagagagataatgtatacctcaaatgaattgaaaataggtaggacatgttggaatatgtcgtctact  12939300  Previous    Next  AGI:  At4g25270.1    Description:  pentatricopeptide (PPR) repeat-containing protein. similar to CRR2 (CHLORORESPIRATORY REDUCTION 2) [Arabidopsis thaliana] (TAIR:AT3G46790.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42662.1); contains InterPro domain Pentatricopeptide repeat (InterPro:IPR002885) Range:  from: 12937263    to: 12938846    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g25280.1    Description:  adenylate kinase family protein. similar to uridylate kinase / uridine monophosphate kinase / UMP kinase (PYR6) [Arabidopsis thaliana] (TAIR:AT5G26667.3); similar to uridylate kinase / uridine monophosphate kinase / UMP kinase (PYR6) [Arabidopsis thaliana] (TAIR:AT5G26667.1); similar to uridylate kinase / uridine monophosphate kinase / UMP kinase (PYR6) [Arabidopsis thaliana] (TAIR:AT5G26667.2); similar to Adenylate kinase (ATP-AMP transphosphorylase) (GB:O24464); contains InterPro domain Adenylate kinase; (InterPro:IPR000850); contains InterPro domain Adenylate/cytidine kinase, N-terminal; (InterPro:IPR011769); contains InterPro domain UMP-C Range:  from: 12938966    to: 12940754    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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