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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
----------->
HVH21
<---------
SPL7
--------->
DAG2
<------
NtERF2
<---------
MYB59
--------->
CCA1(2)
---------->
DOF2
<---------
ANAC46
----------->
RAV1(2)
--------->
AtLEC2
<---------
ANAC58
<---------
ANAC58
--------->
ANAC58
<---------
RAP2.6(2)
<---------
ANAC58
--------->
ANAC46
----->
DOF2
<---------------
AtSPL3
<---------
ARR14(2)
--------->
ANAC58
<----
>
DOF2
<---------
ANAC58
<---------
At4g35610
--------->
GLK1(1)
<----------
CDC5
-----
aagagccatggcgtcttcgtactgacccaattcagcgtagcctgagataagagagttccaagcaaaaggcgatgagtctctcttagacattcgatcgaac
12938400
--------->
HSFB2a(2)
--------->
ANAC58
<---------
ANAC55(2)
--------->
ANAC58
<---------
HSFB2a(2)
--------->
ANAC46
<---------
HSFC1(2)
<---------
LBD16
--------->
LBD16
--------->
ANAC58
<---------
MYB46(3)
--------
<---------
ANAC58
<------
NtERF2
--------->
HSFC1(2)
<--------
P
<------
MYB83
<---------
ANAC46
<---------
ANAC58
<-----------
RAV1(2)
<------
MYB46(1)
<---------
ANAC58
--------->
REM1(2)
--------->
ANAC58
<---------
LBD16
--------->
CCA1(2)
-----
ALFIN1
<---------
ANAC46
<---------
ANAC58
<---------
GLK1(1)
--------->
CCA1(2)
---->
ZAT6
<---------
LBD16
<---------
ANAC46
--------->
GLK1(1)
--------->
LBD16
<-------
acttcgtgtgcaacttccgcgtagccacaagaggcgtagagtctaacaagcttcgatgaaatccccaggttgttccgcaagagatagggaggtataaggt
12938500
<---------
MYB52(1)
<-------
GAMYB
<------
MYB46(1)
------>
ZmHOX2a(2)
<---------
GLK1(1)
<------
ZmHOX2a(2)
--------->
GLK1(1)
<---------
AGP1
<---------
ARR14(3)
<---------
ARR14(2)
--------->
ARR14(3)
<-
<-----------
ARR10
<-
--------->
ANAC58
<---------
HSFB2a(2)
<------
MYB83
------
--------->
ANAC58
<---------
REM1(1)
--------->
ARR11(3)
<-----
--------->
ZAT6
--------->
At4g35610
--------->
ARR14(2)
<---------
DAG2
------->
TEIL
<---------
At4g35610
----------->
ARR10
--------->
At4g35610
->
DAG2
--------->
ANAC46
----------------------->
TaNAC69(2)
<---------
ARR11(3)
<---------
At4g35610
--
TOE2(3)
<---------
WRKY38(1)
--------->
HSFB2a(2)
--------->
MYB59
<----------
DOF2
gatgaactctaacgccatggtcaatagctcttaagctgtagcaggtctcgagaagagaagcgaagatctctggttcggttaatgagatgcctttttgagc
12938600
<------
MYB83
<------
MYB46(1)
<-------
<--------
--------->
At4g35610
<--------
--------->
LBD16
---------
<-----------
RAV1(2)
<---------
MYB46(3)
--------->
SPL7
<------
MYB83
<---------
SPL7
<------
MYB46(1)
<------
MYB83
<---------
ANAC46
<---------
ANAC58
--------->
ALFIN1
<---------
ARR14(2)
<---------
ANAC58
<---------
ANAC46
--------
TOE2(2)
<------
MYB46(1)
--------->
ALFIN1
--------
AtMYB61
--------->
MYB59
<------
ZmHOX2a(1)
--->
At4g35610
---------->
DOF2
<-----------
HVH21
================
HOX2a_HOX2a
----
----
At4g35610
----------->
HVH21
<---------
MYB46(3)
<------
ZmHOX2a(2)
<---------
AtMYB61
ggaggtttcgaggtctgtaatgacagagtctaaagcttcgagttgggtccggtgaatggattgtttttcgatcaagagaggagtgggggatggtttggtg
12938700
<------
MYB83
<---------
AtMYB61
<---------
MYB46(3)
<---------
MYB52(1)
<-----------
RAV1(1)
<---------
At4g35610
----------->
GT1
--------->
REM1(1)
--
ANAC46
<---------
ANAC58
-
MYB46(3)
<---------
ANAC58
-
AtMYB61
<---------
ANAC46
--------->
ATHB12
>
MYB46(2)
<-----------
RAV1(1)
--------->
ALFIN1
<------
MYB46(1)
<---------
YAB1
------>
DOF2
<---------
ARR14(2)
<-----------
RAV1(1)
<----------
DOF2
<------
aaagagagggaagtgaatccattgttgttgtattggttttgtctgtgttgcttcaactgttggtgatgtctgggtttctttttcattgaagaagacgata
12938800
<---------
ZAT18
--------->
ZAT18
<-------
GAMYB
<---------------
AtSPL8
--------->
MYB111(2)
<------
MYB46(1)
<---------
MYB46(3)
<------
MYB83
<---------
TOE2(3)
XXXXXXXXXXXXXXXXXXXX>
MIR778
------>
ZmHOX2a(1)
<---------
HSFC1(2)
<---------
MYB52(1)
--------->
HSFC1(2)
--------->
ANAC46
<-----------
GT1
---
ARR14(2)
--------->
GLK1(2)
--------->
ARR14(2)
---------->
ID1
--------->
TOE2(3)
<----
cagatggataagagaagcttggtttgtgtacaacgatactcaccat
cttcttctcttgtctctattttcttccttaggttgttgataatcgataaatgga
12938900
<---------
MYB52(2)
--------------->
AtSPL8
--------->
TOE2(3)
<---------
ANAC58
--------->
TOE1(3)
<---------
ANAC46
<----------
DOF2
<---------------
AtSPL8
<---------
ANAC58
---------->
ID1
<---------
MYB59
------->
GAMYB
<----------
DOF2
<---------
AHL20(2)
--------------->
AGL15
--------->
At4g35610
<-----------
GT1
--------->
ANAC55(2)
<---------------
AGL15
<---------
At4g35610
--------->
YAB1
<---------
ANAC55(2)
<-----------
GT1
--------->
MYB46(3)
-----
ANAC46
--------->
TOE2(3)
<-------
TEIL
--------------->
AtSPL8
---------->
DOF2
---
gggaagcagagtcttgtgagaatacattaataactttcgtagaagttacatatttttttttgttc
ttttttgttttaccttacaaagtacaacaaacaaa
12939000
------>
MYB83
------>
MYB46(1)
<--------
<--------
<--------
<---------
YAB1
<--------
------------>
CBF
<---------
ZAT18
--------->
ICU4
--------->
ANAC46
<-------
TEIL
--------->
ZAT18
--------->
ICU4
<----------
DOF2
<-----------
GT1
------->
DOF2
<------------
CBF
<-------
TEIL
<---------
AtMYB61
------->
TEIL
aaaagatgcaatgcgaattgcatatagtgcatcaaaattcatgagtaatgaacaaatttcagactggtggtcttttg
tcaagatgaattttctaccaaac
12939100
--------->
AHL20(2)
--------->
ANAC58
--------->
ANAC46
--------->
ANAC58
<---------
At4g35610
--------->
ZAT6
<---------
AtLEC2
--------->
ZAT14
<---------
At4g35610
-
MYB111(1)
--------->
ANAC55(2)
<---------
ZAT18
<-----------
RAV1(2)
-
MYB111(2)
<-----------
GT1
<------------
CBF
--------->
AHL20(1)
-
MYB59
<---------
ARR14(2)
------------>
CBF
<---------
AHL20(2)
-
MYB46(2)
--------->
ARR14(2)
------>
ZmHOX2a(1)
--------->
AHL20(2)
tcgaaccgagatgggactgtggatttacatgactactctccttcaattg
ctgcacacaaaaaaaaattgcaggtgttaacacaaatcgtgttctactcaa
12939200
----------->
GT1
------>
ZmHOX2a(2)
<------
ZmHOX2a(1)
--------->
At4g35610
<------
MYB46(1)
<---------
ZAT14
<---------
ATHB12
<------
MYB83
<----
<---------
ANAC46
--------->
TOE1(3)
--------->
MYB59
<---------
ANAC46
<---------
ANAC58
--------->
ARR11(3)
----------->
GT1
<---------
ANAC58
<---------
ANAC58
---------->
DOF2
--------->
TOE2(3)
<--------
P
<---------
ANAC58
aatatggagtgatctgtaatacagtgagagagaaagagagataatgtatac
ctcaaatgaattgaaaataggtaggacatgttggaatatgtcgtctact
12939300
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AGI:
At4g25270.1
Description:
pentatricopeptide (PPR) repeat-containing protein. similar to CRR2 (CHLORORESPIRATORY REDUCTION 2) [Arabidopsis thaliana] (TAIR:AT3G46790.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42662.1); contains InterPro domain Pentatricopeptide repeat (InterPro:IPR002885)
Range:
from: 12937263
to: 12938846
Orientation: Reverse
Links:
TAIR
MIPS
AGI:
At4g25280.1
Description:
adenylate kinase family protein. similar to uridylate kinase / uridine monophosphate kinase / UMP kinase (PYR6) [Arabidopsis thaliana] (TAIR:AT5G26667.3); similar to uridylate kinase / uridine monophosphate kinase / UMP kinase (PYR6) [Arabidopsis thaliana] (TAIR:AT5G26667.1); similar to uridylate kinase / uridine monophosphate kinase / UMP kinase (PYR6) [Arabidopsis thaliana] (TAIR:AT5G26667.2); similar to Adenylate kinase (ATP-AMP transphosphorylase) (GB:O24464); contains InterPro domain Adenylate kinase; (InterPro:IPR000850); contains InterPro domain Adenylate/cytidine kinase, N-terminal; (InterPro:IPR011769); contains InterPro domain UMP-C
Range:
from: 12938966
to: 12940754
Orientation: Reverse
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.