Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100              <---------MYB46(3)   --------->ARR11(3)   <---------ARR11(3)   <---------ANAC58                                                        -----   <---------AHL20(1)   <---------ANAC58                               <-----------GT1  <---------AHL20(2) -------->AHL20(2)   <----------DOF2                            --------->ZAT6   --------->TOE2(3) --------YAB1        <---------DAG2                   --------->At5g28300--------->TOE2(3)<---------- ----->YAB1 --------->ATHB12          >>>>>>>>>>>>>>>>>LFY    <-----------GT1    --------->TOE1(3) -----YAB1 <---------ATHB12        <---------KAN4(1) ----------->GT1--------->YAB1     --------->YAB1   gataatatatccaatggttgccactttcttgactacaatattccattgtgccattcggtaaattttactctaataacttaataccttaattttaacaaaa  12096400                                                                                           ----------                                                                                          <---------DEAR3(1)                                         --------->TOE2(3)                                <---------ANAC46                 <---------AHL20(2)    <---------YAB1                          --------->ATHB12         --------->CCA1(2)       <----------DOF2                              <---------YAB1--------- <---------TOE2(3)             ---------->ID1                     ------>ZmHOX2a(1)     --------->MYB52(1) ---->DAG2<-------TEIL        <-----------GT1           <-----------GT1----------->GT1 ----------->TGA1 -GT1 --------->MYB59      --------->AHL20(2)      <---------YAB1--------->TOE2(3)     ----------->HVH21   attgatgttagatacacatataatggcaattttttctttttattcttaatatgatgtttaactaaatcctaaatggtattttgattagaatgacggtgat  12096500                                               ----------->GT1                 --------->AHL20(2)                                               <------MYB83               <---------AHL20(1)                                              <---------TOE2(2)           --------->AHL20(1)                                          --------->HSFB2a(2)             <---------AHL20(2)                                          <---------HSFB2a(2)<---------------AtSPL8                                 --------->AHL20(2)          --------->DAG2    <---------AHL20(2)                                 <---------AHL20(2)          <---------------AtSPL3   --------->ANAC58                                <---------AHL20(2)   <----------DOF2  --------->AHL20(2)                             <---------AHL20(2)<------MYB46(1)        <---------AHL20(2)                            <---------AHL20(2)<---------TOE1(2)  <-------TEIL --------->YAB1                         <---------AHL20(2)   --------->MYB59--------------->AtSPL3   --------->ANAC58 ->GT1                   --------->AHL20(2)  <--------P     ---------->DOF2  <---------YAB1      <--- >At5g28300         ------------>CBF <---------AHL20(2)  <---------TOE2(3)--------->AHL20(2) --------   atatcaaacacttacatgtgagttcaattttttatttattttttctagtaggttactttaagaaaagtacgtttaatttattaaaatcaagaaaattcaa  12096600                             <---------GLK1(2)                         <------ZmHOX2a(1)                      --------->AHL20(2)                          --------->LBD16                      <---------AHL20(2)                         --------->ANAC46                     <---------AHL20(2)                          --------->HSFB2a(2)                   ==================================================================================                   <-----------------AGL3                        <---------HSFB2a(2)                  --------->AHL20(2)                            <---------LBD16                  <---------AHL20(2)                          <---------ARR14(2)                 <---------AHL20(2)                      <-----------HVH21             --------->AHL20(1)             ----------->ARR10 --------->ARR14(2)             <---------AHL20(2)        <---------ANAC46 --------->bZIP60(1)             --------->AHL20(2)      <---------ICU4     <---------bZIP60(1) --------RAV1(1) --------->AHL20(2) --------->ICU4  <----------DOF2   --------->ICU4                < ---->CBF    <---------AHL20(1)  <---------YAB1 <-------TEIL <---------CCA1(2)                   ----   tgttgttttgactaatttattaatttatatggattctaattatgtgtagatgcgcttgatgtcatatccggaaggattacaaattaagagacagacacat  12096700                     <---------HSFB2a(2)                     --------->HSFB2a(2)                  <----------DOF2  <---------AtMYB61                  <---------DAG2<---------REM1(1)               <---------------AGL15              <-----------------AGL2         <------------CBF              ----------------->AGL1<------MYB83                           ---------->DOF2              =======================================================================================              <-----------------AG<--------P------>ZmHOX2a(1)       --------->ANAC46              <-- ===============================MADS_MADS---------->ID1             --------->ANAC58              --- -----------GT1--------------->AGL15<------MYB46(1)                 --------->ANAC58         XXXXXXXX ------->GT1<-----------GT1     <---------ZAT6             ------>ZmHOX2a(1)         <----------DOF2<   agtaacaaaacatttagccacttttggaagaatagtgtaggttgtcctattggtacagttcctatacttcaagtcaccaaagacactcttttgaaaatga  12096800                   <---------YAB1                  --------->AHL20(2)                 --------->YAB1              <--------HAHB4              <---------ICU4              --------->YAB1             --------->ICU4             <---------ATHB51             <---------YAB1      <---------ANAC58   --------->AHL20(2)    --------->LBD16                                       <---------ANAC55(2)   <---------AHL20(2)   --------->ANAC58                                    --------->ICU4 <----------DOF2 <---------ICU4  <---------ANAC46                      --------->ANAC58 <---------------AGL15  --------->ANAC46                               --------->ANAC58 =================MADS_MADS---------->DOF2                             --------->ANAC46           --- -------ARR11(3)--------->ICU4   <---------ANAC58        --------->ANAC46--------->TGA2(2)       <--- ------>ARR11(3)<---------YAB1  <-------TEIL          --------->TOE2(2)--------->bZIP60(2)      <---- XXXXXXXXXXXX>MIR1886.2 --------->ANAC58         <---------AHL20(2)    --------->bZIP60(1)     ------ -----------------AGL3 <---------LBD16           --------->AHL20(2)   ------->TEIL          <--------   aatctttaaatggcgataattataatccgcaaagttcgtggagcaaaacatataaatctacgtcttctaatggacgtcatcatgtaagtgttttctttta  12096900                                                                             --------->AHL20(1)                                                                             <---------AHL20(1)                                                                             --------->AHL20(2)                                                                             <---------ARR11(3)     <---------YAB1                                                    <---------ICU4      <---------YAB1  --------->AHL20(2)                                             --------->YAB1           --------->AHL20(2)  <---------AHL20(2)                                           --------->AHL20(2)        <---------ICU4  <---------AHL20(1)                                        --------->AHL20(2)          --------->ICU4 ------>YAB1                                     --------->AHL20(2)    <-----------GT1--------->AHL20(2) ------YAB1                                      <---------AHL20(2) <---------ICU4   --------->AHL20(2) -------GT1          <-----------HVH21          <---------AHL20(2) --------->ICU4    <---------AHL20(2) --->YAB1      --------->ANAC58                 --------->AHL20(2) <---------YAB1--------->AHL20(2) --DOF2        --------->ANAC58     <-----------GT1<---------TOE2(3)--------->YAB1<---------AHL20(2)   tcattttatttttaagtaagaaatgtcaaacatacaaaaaacctttctaaattaatatttgataaaataataataactatatattaaataatttttatag  12097000                                                       --------->YAB1                                                       <---------ICU4                                                       -------->HAHB4                                                       --------->ATHB51                                               <---------YAB1                                              <---------AHL20(1)                                            <---------YAB1                                            <---------TOE2(3)                        --------->ANAC55(2)                              --------->AHL20(1)       <--------ATHB1                <---------YAB1                              <---------AHL20(1)      <---------AHL20(2)       <---------AHL20(1)                              <---------AHL20(2)      --------->ICU4           --------->AHL20(1)                              --------->AHL20(2)      <---------YAB1          <---------AHL20(2)                              <---------ARR11(3)      <---------ATHB51      --------->AHL20(2)                              --------->ARR11(3)  <---------YAB1           <---------AHL20(1)     <--                             --------->AHL20(2)<---------AHL20(2)          --------->AHL20(1)     <--                         <---------AHL20(2)--------->AHL20(2)        --------->TOE2(3)            ---                         --------->AHL20(2)--------->YAB1          --------->GLK1(2) <---------ANAC55(2)                   --------->YAB1<---------AHL20(2) --------->YAB1 --------->ICU4 <---------AHL20(2)   cctcgagttttttttttgaaatcatatttaaatatattatctcattaatattattaataattgtatgaaattcttaatatatatattatgtaagaaaatt  12097100                                                                                               <-----                                                       ----------->GT1      --------->ANAC46 <------- ----MYB83                                           ---------->DOF2      <-----------GT1 --------->ALFIN1 ----MYB46(1)                                  --------->TOE2(3)     <---------AHL20(1)  <-------MYC3 -------->GT1             --------->AHL20(2) <---------YAB1          --------->AHL20(1)  ------->MYC3   tggtgaaatatgactctactattgtttttaaaataaaacttgcatttattcttagtaaagtttatttctaatatttttactccatcaaaaacgtgttgtg  12097200                                                                ---------->DOF2                                                          ----------->GT1                                              --------->HSFB2a(2)                                              <---------HSFB2a(2)     --------->HSFC1(1)                 <---------ICU4    <---------MYB46(3)     --------->HSFB2a(2)               --------->ICU4--------->AHL20(1)     <---------HSFB2a(2)            <---------YAB1   <---------AHL20(2)     <---------HSFC1(1)           ----------->GT1    <---------ARR11(3)     --------------->AGL15        --------->YAB1     --------->ARR11(3)     <---------------AGL15    <---------AHL20(2)     --------->AHL20(2)    <----------DOF2 ------RAV1(1)               <---------AHL20(2)      <---------AHL20(1)--------->DAG2 --ANAC46                    --------->AHL20(2)     --------->AHL20(2)---------->DOF2    ---------->DOF2   ttgttttctagacatagtaattgttttttttttaaattgtaattagttctacaaatatattggttataaagaaaaagcttttttttgacataaaagtttt  12097300  Previous    Next  AGI:  At4g23080.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G10220.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39609.1); contains InterPro domain Protein of unknown function DUF239, plant (InterPro:IPR004314) Range:  from: 12096797    to: 12098899    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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