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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
<---------
MYB46(3)
--------->
ARR11(3)
<---------
ARR11(3)
<---------
ANAC58
-----
<---------
AHL20(1)
<---------
ANAC58
<-----------
GT1
<---------
AHL20(2)
-------->
AHL20(2)
<----------
DOF2
--------->
ZAT6
--------->
TOE2(3)
--------
YAB1
<---------
DAG2
--------->
At5g28300
--------->
TOE2(3)
<----------
----->
YAB1
--------->
ATHB12
>>>>>>>>>>>>>>>>>
LFY
<-----------
GT1
--------->
TOE1(3)
-----
YAB1
<---------
ATHB12
<---------
KAN4(1)
----------->
GT1
--------->
YAB1
--------->
YAB1
gataatatatccaatggttgccactttcttgactacaatattccattgtgccattcggtaaattttactctaataacttaataccttaattttaacaaaa
12096400
----------
<---------
DEAR3(1)
--------->
TOE2(3)
<---------
ANAC46
<---------
AHL20(2)
<---------
YAB1
--------->
ATHB12
--------->
CCA1(2)
<----------
DOF2
<---------
YAB1
---------
<---------
TOE2(3)
---------->
ID1
------>
ZmHOX2a(1)
--------->
MYB52(1)
---->
DAG2
<-------
TEIL
<-----------
GT1
<-----------
GT1
----------->
GT1
----------->
TGA1
-
GT1
--------->
MYB59
--------->
AHL20(2)
<---------
YAB1
--------->
TOE2(3)
----------->
HVH21
attgatgttagatacacatataatggcaattttttctttttattcttaatatgatgtttaactaaatcctaaatggtattttgattagaatgacggtgat
12096500
----------->
GT1
--------->
AHL20(2)
<------
MYB83
<---------
AHL20(1)
<---------
TOE2(2)
--------->
AHL20(1)
--------->
HSFB2a(2)
<---------
AHL20(2)
<---------
HSFB2a(2)
<---------------
AtSPL8
--------->
AHL20(2)
--------->
DAG2
<---------
AHL20(2)
<---------
AHL20(2)
<---------------
AtSPL3
--------->
ANAC58
<---------
AHL20(2)
<----------
DOF2
--------->
AHL20(2)
<---------
AHL20(2)
<------
MYB46(1)
<---------
AHL20(2)
<---------
AHL20(2)
<---------
TOE1(2)
<-------
TEIL
--------->
YAB1
<---------
AHL20(2)
--------->
MYB59
--------------->
AtSPL3
--------->
ANAC58
->
GT1
--------->
AHL20(2)
<--------
P
---------->
DOF2
<---------
YAB1
<---
>
At5g28300
------------>
CBF
<---------
AHL20(2)
<---------
TOE2(3)
--------->
AHL20(2)
--------
atatcaaacacttacatgtgagttcaattttttatttattttttctagtaggttactttaagaaaagtacgtttaatttattaaaatcaagaaaattcaa
12096600
<---------
GLK1(2)
<------
ZmHOX2a(1)
--------->
AHL20(2)
--------->
LBD16
<---------
AHL20(2)
--------->
ANAC46
<---------
AHL20(2)
--------->
HSFB2a(2)
==================================================================================
<-----------------
AGL3
<---------
HSFB2a(2)
--------->
AHL20(2)
<---------
LBD16
<---------
AHL20(2)
<---------
ARR14(2)
<---------
AHL20(2)
<-----------
HVH21
--------->
AHL20(1)
----------->
ARR10
--------->
ARR14(2)
<---------
AHL20(2)
<---------
ANAC46
--------->
bZIP60(1)
--------->
AHL20(2)
<---------
ICU4
<---------
bZIP60(1)
--------
RAV1(1)
--------->
AHL20(2)
--------->
ICU4
<----------
DOF2
--------->
ICU4
<
---->
CBF
<---------
AHL20(1)
<---------
YAB1
<-------
TEIL
<---------
CCA1(2)
----
tgttgttttgactaatttattaatttatatggattctaattatgtgtagatgcgcttgatgtcatatccggaaggattacaaattaagagacagacacat
12096700
<---------
HSFB2a(2)
--------->
HSFB2a(2)
<----------
DOF2
<---------
AtMYB61
<---------
DAG2
<---------
REM1(1)
<---------------
AGL15
<-----------------
AGL2
<------------
CBF
----------------->
AGL1
<------
MYB83
---------->
DOF2
=======================================================================================
<-----------------
AG
<--------
P
------>
ZmHOX2a(1)
--------->
ANAC46
<--
===============================
MADS_MADS
---------->
ID1
--------->
ANAC58
---
-----------
GT1
--------------->
AGL15
<------
MYB46(1)
--------->
ANAC58
XXXXXXXX
------->
GT1
<-----------
GT1
<---------
ZAT6
------>
ZmHOX2a(1)
<----------
DOF2
<
agtaacaaaacatttagccacttttggaagaatagtgtaggttgtcctattggtacagttcctatacttcaagtcaccaaagacactcttttgaaa
atga
12096800
<---------
YAB1
--------->
AHL20(2)
--------->
YAB1
<--------
HAHB4
<---------
ICU4
--------->
YAB1
--------->
ICU4
<---------
ATHB51
<---------
YAB1
<---------
ANAC58
--------->
AHL20(2)
--------->
LBD16
<---------
ANAC55(2)
<---------
AHL20(2)
--------->
ANAC58
--------->
ICU4
<----------
DOF2
<---------
ICU4
<---------
ANAC46
--------->
ANAC58
<---------------
AGL15
--------->
ANAC46
--------->
ANAC58
=================
MADS_MADS
---------->
DOF2
--------->
ANAC46
---
-------
ARR11(3)
--------->
ICU4
<---------
ANAC58
--------->
ANAC46
--------->
TGA2(2)
<---
------>
ARR11(3)
<---------
YAB1
<-------
TEIL
--------->
TOE2(2)
--------->
bZIP60(2)
<----
XXXXXXXXXXXX>
MIR1886.2
--------->
ANAC58
<---------
AHL20(2)
--------->
bZIP60(1)
------
-----------------
AGL3
<---------
LBD16
--------->
AHL20(2)
------->
TEIL
<--------
aatctttaaatggcgataattataatccgcaaagttcgtggagcaaaacatataaatctacgtcttctaatggacgtcatcat
gtaagtgttttctttta
12096900
--------->
AHL20(1)
<---------
AHL20(1)
--------->
AHL20(2)
<---------
ARR11(3)
<---------
YAB1
<---------
ICU4
<---------
YAB1
--------->
AHL20(2)
--------->
YAB1
--------->
AHL20(2)
<---------
AHL20(2)
--------->
AHL20(2)
<---------
ICU4
<---------
AHL20(1)
--------->
AHL20(2)
--------->
ICU4
------>
YAB1
--------->
AHL20(2)
<-----------
GT1
--------->
AHL20(2)
------
YAB1
<---------
AHL20(2)
<---------
ICU4
--------->
AHL20(2)
-------
GT1
<-----------
HVH21
<---------
AHL20(2)
--------->
ICU4
<---------
AHL20(2)
--->
YAB1
--------->
ANAC58
--------->
AHL20(2)
<---------
YAB1
--------->
AHL20(2)
--
DOF2
--------->
ANAC58
<-----------
GT1
<---------
TOE2(3)
--------->
YAB1
<---------
AHL20(2)
tcattttatttttaagtaagaaatgtcaaacatacaaaaaacctttctaaattaatatttgataaaataataataactatatattaaataatttttatag
12097000
--------->
YAB1
<---------
ICU4
-------->
HAHB4
--------->
ATHB51
<---------
YAB1
<---------
AHL20(1)
<---------
YAB1
<---------
TOE2(3)
--------->
ANAC55(2)
--------->
AHL20(1)
<--------
ATHB1
<---------
YAB1
<---------
AHL20(1)
<---------
AHL20(2)
<---------
AHL20(1)
<---------
AHL20(2)
--------->
ICU4
--------->
AHL20(1)
--------->
AHL20(2)
<---------
YAB1
<---------
AHL20(2)
<---------
ARR11(3)
<---------
ATHB51
--------->
AHL20(2)
--------->
ARR11(3)
<---------
YAB1
<---------
AHL20(1)
<--
--------->
AHL20(2)
<---------
AHL20(2)
--------->
AHL20(1)
<--
<---------
AHL20(2)
--------->
AHL20(2)
--------->
TOE2(3)
---
--------->
AHL20(2)
--------->
YAB1
--------->
GLK1(2)
<---------
ANAC55(2)
--------->
YAB1
<---------
AHL20(2)
--------->
YAB1
--------->
ICU4
<---------
AHL20(2)
cctcgagttttttttttgaaatcatatttaaatatattatctcattaatattattaataattgtatgaaattcttaatatatatattatgtaagaaaatt
12097100
<-----
----------->
GT1
--------->
ANAC46
<-------
----
MYB83
---------->
DOF2
<-----------
GT1
--------->
ALFIN1
----
MYB46(1)
--------->
TOE2(3)
<---------
AHL20(1)
<-------
MYC3
-------->
GT1
--------->
AHL20(2)
<---------
YAB1
--------->
AHL20(1)
------->
MYC3
tggtgaaatatgactctactattgtttttaaaataaaacttgcatttattcttagtaaagtttatttctaatatttttactccatcaaaaacgtgttgtg
12097200
---------->
DOF2
----------->
GT1
--------->
HSFB2a(2)
<---------
HSFB2a(2)
--------->
HSFC1(1)
<---------
ICU4
<---------
MYB46(3)
--------->
HSFB2a(2)
--------->
ICU4
--------->
AHL20(1)
<---------
HSFB2a(2)
<---------
YAB1
<---------
AHL20(2)
<---------
HSFC1(1)
----------->
GT1
<---------
ARR11(3)
--------------->
AGL15
--------->
YAB1
--------->
ARR11(3)
<---------------
AGL15
<---------
AHL20(2)
--------->
AHL20(2)
<----------
DOF2
------
RAV1(1)
<---------
AHL20(2)
<---------
AHL20(1)
--------->
DAG2
--
ANAC46
--------->
AHL20(2)
--------->
AHL20(2)
---------->
DOF2
---------->
DOF2
ttgttttctagacatagtaattgttttttttttaaattgtaattagttctacaaatatattggttataaagaaaaagcttttttttgacataaaagtttt
12097300
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AGI:
At4g23080.1
Description:
similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G10220.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39609.1); contains InterPro domain Protein of unknown function DUF239, plant (InterPro:IPR004314)
Range:
from: 12096797
to: 12098899
Orientation: Forward
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.