Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                      <---------AHL20(2)                                          <---------WOX13(1)                             <---------AHL20(2)  <--------HAHB4                             --------->AHL20(2)  <---------ICU4--------->ANAC58    <------ZmHOX2a(2)     --------->AHL20(2)    --------->ICU4 --------->ANAC58   <---------ARR11(3)     --------->YAB1--------->ATHB12--------->YAB1                          -----   --------->ARR11(3)  --------->YAB1  --------->ICU4--------->WOX13(1)                  ---------->DOF2 -------->DOF2     --------->ZAT6   --------->ZAT6  --------->AHL20(2)    --------->ATHB12    -------   taaaagatcaacacaaaattcactctaataaaaaaatagcactaattggcataattaatcaaaacacgaatgcaattcatttgtaagagaataaagaaaa  10554600                 --------->LBD16                                ------->TEIL       --------->AHL20(2)             <-------TEIL             <XXXXXXXXXXXXXXXXXXXXXXXMIR836       <---------AHL20(2)   <---------AtMYB61              <---------AtLEC2   <---------YAB1----------->GT1  <---------TOE2(3)    <---------WOX13(1)                      <----- ------>GT1    <---------LBD16    <---------TOE1(3)  --------->ATHB12                         ------- --->DOF2  <---------AHL20(2)     --------->MYB59   <---------YAB1                ----------->GT1   gaaatatgtttaatttatgcggaaaatagtgtggtttaggttcaattttgtatactaattggcatgaatcaaacaaaacacaggcagtttatttggagga  10554700                                  <---------ANAC46                                             ------                               ----------->TGA1  <---------YAB1                               -------                     <------ZmHOX2a(1)     ------------>CBF                                   -------                    ----------->GT1    <---------TOE1(2)       <---------WOX13(1)             -------          --------->DAG2       ----------->HVH21<---------ARR11(3)                            ------- -ZmHOX2a(1)      <------ZmHOX2a(1)    <---------TOE2(3)      <------------CBF  ------------>CBF   -- ---->GT1---------->DOF2  --------->GLK1(2)<-------TEIL     <---------YAB1 ---------->DOF2  ---------   aaaaaaaaaaaaaaagtttaggaggaaaaatcggtgacgcttaggttcaatatgtttatgtgctaattgatggcccatgaagcccaatatgtagcaacgg  10554800                                               --------->AHL20(1)                                               <---------AHL20(2)                                               --------->AHL20(2)  --------->ATHB12                            --------->AHL20(2) ->GAMYB                        --------->ANAC55(1) -->ANAC46                      --------->ANAC55(2) -->ANAC58                      <---------ANAC55(2) -->bZIP60(2)                   --------->ANAC46 -->ANAC58       ----------->TBP--------->ANAC58            <------------CBF ------->bZIP60(2)              --------->ANAC58    <-----------GT1       ---------->DOF2 >MYB52(1)   <---------ANAC46 <-----------GT1 <---------AHL20(2)    <------------CBF   cacatcatttgcctctcgtataaatctcattttcacgtaatattctaaattaattaacaagagattgagagattgagaaagagcgagagagagagagaga  10554900                                                                                               <-----                                                                --------->GLK1(1)      <---------YAB1                                                                <---------GLK1(1)      <---------AHL20(2)                     <---------ARR11(3)                     --------->LBD16           --------->AHL20(1)                     --------->ARR11(3)                    --------->LBD16            <---------AHL20(2)                 ---------->DOF2                           --------->ANAC46           <---------AHL20(1)              <---------HSFB2a(2)                     ------>ZmHOX2a(2)               --------->AHL20(2)        <---------GLK1(2)                  <-----------GT1<---------LBD16        ------------>CBF      --------->ANAC58               <----------DOF2<---------ARR11(3)   <---------At4g35610   <-----      --------->ANAC58       ---------->DOF2        --------->ARR11(3)   --------->At4g35610   <-----   gcgagagcaagaaactcgagaaagatttactaaaagagcctttattctccccttgatcttcccgcgatttccttcggctgaagaacaatataatggagcg  10555000                                 ----------->GT1                               ------>ZmHOX2a(2)                              <------ZmHOX2a(2)                             --------->ARR11(3)                             <---------ARR11(3)                             --------->GLK1(2)                             <---------ARR14(3)                             <---------ARR14(2)                             <---------AGP1                             <-----------ARR10              <---------DEAR3(1)                             --------->ARR14(3)            ---------->ID1                            ===========================HOX2a_HOX2a                            <------ZmHOX2a(1)           <-------TEIL                        --------->LBD16              <---------HSFB2a(1)                       --------->HSFB2a(2)           --------->HSFB2a(1)                       <---------HSFB2a(2)           --------->HSFC1(2)                     =================HOX2a_HOX2a    <---------HSFC1(2)                 --------->CCA1(2)          --------->At4g35610--------->ARR14(2)    ---------->DOF2                   --------->ANAC58      <-----------TGA1<---------LBD16          XXXXXXXXXXXXXXXXXXXX>MIR779.2         --------->ANAC58 ----ANAC58          ================HOX2a_HOX2a------>ZmHOX2a(2)              ----------->RAV1(1) ----ANAC58          ------>ZmHOX2a(1)       --------->ATHB12   <-----------HVH21    --------->ANAC46 ----ANAC46          ==================================HOX2a_HOX2a             ------->GAMYB    -----   tgagacttcgtcatcttcaactcctccggaggatcttgttacatcgatgatcggaaagttcgtcgctgtcatgtctaacaacgacatacgatacgaaggc  10555100                                                                                        <---------YAB1                                                                              ------>ZmHOX2a(2)                                 <------MYB83                                <------ZmHOX2a(2)                                 <------MYB46(1)                             --------->CCA1(2)                                --------->MYB59                             <-----------ARR10                        <-------TEIL <-----------------AGL1                 --------->ARR14(3)                       --------->CCA1(2)                                    <---------ARR14(3)                       --------->ARR14(1)                                   <---------ARR14(2)                      <---------GLK1(2)       --------->At5g28300           --------->ARR14(2)                      --------->ARR14(2)      --------->DOF5.7(2)           --------->ARR11(3)   <-----------GT1    --------->ARR11(1)     ----------->GT1                <---------ARR11(3)     <- ------>GT1           <---------ARR14(2)  --------->MYB52(1)                --------->AGP1   <-------   gttattagccttctcaatctgcaagattcgaaattaggtctccaaaacggtaacaattcgattccaaaccctctccaagatctactgtttatgattttct  10555200                                               <---------ANAC46                                               <---------ANAC55(1)                               <-------GAMYB   <---------ANAC58                              --------->MYB52(2)  --------->REM1(2)       <---------ARR11(3)     <---------MYB46(3)--------->LBD16                            <---------WOX13(1)       --------->ARR11(3) <---------AtMYB61    <---------ANAC58                       <---------ANAC55(2) ---------DOF2          <----------DOF2       <---------LBD16                         --------->ANAC55(2) ----GT1            ---------->ID1        --------->KAN4(2)          --------->AHL20(2) ----------->HVH21   tcttttcaagttcttcatatttgtttctttggtcgttgttagaatatttccgtgaaaactatacgtttcatatatataaaacagtatcatgtgatagatt  10555300                                                                               <-------TEIL                                                                              <---------ARR11(3)                                  <---------HSFB2a(2)                        <---------GLK1(2)                                  <---------TOE2(3)                        --------->LBD16 --------->ZAT18                                  --------->HSFB2a(2)                      <---------TOE1(2)                        <---------MYB52(1)              <---------ICU4    <-----------RAV1(2)   <----               ------->TEIL<---------TOE2(3)           --------->ICU4--------->ALFIN1      --------->ZAT14         <---------AHL20(2)<---------TOE1(3)         --------->YAB1  --------->HSFB2a(1)   <---------ZAT14   <------NtERF2      <---------MYB46(3)            <---------YAB1   <---------ZAT6---------->DOF2  <   aaggcctcaaatttatgtatgcagtcgttagggtttatggaagagaggttgagaatgataatgagcaacgagtgttccaggttcttaaagaagttcacag  10555400                                                                                                    -                                                                                               ------                                                                                               <-----                                                                                            ---------                                                                                         <---------ANAC46                                                                                         <---------ANAC58                                                                                         <---------ANAC58                             <--------P                                              <-------GAMYB  -                          <---------TOE2(3) <---------AHL20(2)                      --------->MYB111(2)                          <---------TOE1(3) --------->AHL20(2)  --------->ANAC46    --------->MYB46(2)   ----------->GT1----------->HVH21    <---------MYB52(1)      ------>ZmHOX2a(1)    --------->MYB111(1) -------HVH21   ----------->GT1       --------->TOE2(3)   <---------GLK1(2)         --------->MYB52(2) ---------O2  <------ZmHOX2a(1)--------->MYB52(2)    <-------TEIL              ------>ZmHOX2a(1)    -   tcacatggtatttagaggaagtgacattaaggttagttttcgttaattttttgggttcaagattcctcgctagtcttcttcctagttagttgcttgctgc  10555500  Previous    Next  AGI:  At4g19330.1    Description:  kelch repeat-containing F-box family protein. Identical to Putative F-box/Kelch-repeat protein At4g19330 [Arabidopsis Thaliana] (GB:O65704); similar to kelch repeat-containing protein [Arabidopsis thaliana] (TAIR:AT4G19250.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71765.1); similar to 117M18_27 [Brassica rapa] (GB:AAZ66946.1); contains InterPro domain Kelch repeat type 1 (InterPro:IPR006652); contains InterPro domain Kelch-type beta propeller (InterPro:IPR015915); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810); contains InterPro domain Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043) Range:  from: 10554993    to: 10558686    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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